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2024-05-21 03:24:28

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Shigella dysenteriae Sd197, Sd197

Number of genes found: 179

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Shigella dysenteriae Sd197, Sd197
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA SDY_1669 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1529522 1737 - 0.557283
NA SDY_2760 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2560844 360 - 0.511111
NA SDY_2728 putative ATP synthase beta subunitRecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; chromosome CDS2526038 738 - 0.55149
NA SDY_0985 conserved hypothetical proteinRecName: Full=Putative aminoacrylate peracid reductase RutC; EC=1.-.-.-; chromosome CDS933742 387 - 0.542636
NA SDY_0577 putative bacteriophage proteinSubName: Full=Putative bacteriophage protein; chromosome CDS553055 558 - 0.473118
NA SDY_1749 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1593031 435 + 0.48046
NA SDY_2883 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2667174 1044 + 0.54023
NA SDY_1713 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1566429 393 + 0.51145
NA SDY_1750 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1593696 249 + 0.506024
NA SDY_2451 putative transformylaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS2250985 1635 + 0.515596
NA SDY_0313 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS305221 405 + 0.303704
alaS SDY_2893 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS2673153 2631 - 0.535158
ansA SDY_1506 cytoplasmic L-asparaginase ISubName: Full=Cytoplasmic L-asparaginase I; chromosome CDS1377709 1017 - 0.507375
ansB SDY_3115 periplasmic L-asparaginase IISubName: Full=Periplasmic L-asparaginase II; chromosome CDS2888943 1047 + 0.5234
argS SDY_1180 arginine tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS1093741 1734 + 0.532872
asnS SDY_2327 asparagine tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS2113677 1401 + 0.523198
aspS SDY_1153 aspartate tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS1071747 1773 - 0.540891
cafA SDY_3422 bundles of cytoplasmic filamentsSubName: Full=Bundles of cytoplasmic filaments; chromosome CDS3180065 1488 - 0.518817
cca SDY_3239 tRNA nucleotidyl transferaseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS3002007 1239 + 0.564972
cysS SDY_0278 cysteine tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS272589 1386 + 0.546898
deaD SDY_3341 inducible ATP-independent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3096682 1941 - 0.553323
def SDY_3463 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS3216126 510 + 0.462745
efp SDY_4390 elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4109639 567 + 0.500882
fmt SDY_3464 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS3216650 948 + 0.523207
frr SDY_0188 ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS193134 558 + 0.507168
ftsJ SDY_3360 cell division proteinRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS3118440 630 - 0.501587
fusA SDY_3501 GTP-binding protein chain elongation factor EF-GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS3238732 2115 - 0.508274
glnS SDY_0614 glutamine tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS579328 1665 + 0.524925
gltX SDY_2600 glutamate tRNA synthetase, catalytic subunitRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2396823 1416 - 0.526836
glyQ SDY_4344 glycine tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS4070118 912 + 0.554825
glyS SDY_4345 glycine tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS4071039 2070 + 0.554589
gshB SDY_3125 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome CDS2896845 951 - 0.53102
hemK SDY_1261 possible protoporphyrinogen oxidaseRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS1168185 834 + 0.552758
hisS SDY_2710 histidine tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS2502579 1275 - 0.545098
ileS SDY_0048 isoleucine tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS41180 2817 + 0.555201
infA SDY_2377 protein chain initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS2180223 219 + 0.484018
infB SDY_3347 protein chain initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS3104053 2673 - 0.533483
infC SDY_1813 protein chain initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS1649160 435 - 0.478161
ksgA SDY_0076 S-adenosylmethionine-6-N',N'-adenosyldimethyltra nsferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS70731 822 - 0.529197
lasT SDY_4664 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4368522 687 + 0.491994
leuS SDY_0564 leucine tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS545011 2583 - 0.53194
lysS SDY_3192 lysine tRNA synthetase, constitutiveRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS2958869 1518 + 0.525692
map SDY_0184 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS188974 795 - 0.501887
miaA SDY_4418 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS4133625 951 - 0.528917
pcnB SDY_0159 poly(A) polymerase IRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; chromosome CDS158058 1365 - 0.561905
pheS SDY_1809 phenylalanine tRNA synthetase, alpha-subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1647027 984 - 0.54065
pmrD SDY_2455 polymyxin resistance protein BSubName: Full=Polymyxin resistance protein B; chromosome CDS2256252 261 - 0.444444
pnp SDY_3343 polynucleotide phosphorylaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS3099744 2205 - 0.53424
prfA SDY_1260 peptide chain release factor RF-1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS1167103 1083 + 0.531856
prfB SDY_3191 peptide chain release factor RF-2SubName: Full=Peptide chain release factor RF-2; chromosome CDS2957978 882 + 0.536281
prfC SDY_4634 peptide chain release factor RF-3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS4336776 1590 + 0.537107
prfH SDY_0481 probable peptide chain release factorSubName: Full=Probable peptide chain release factor; chromosome CDS467989 501 - 0.546906
prmA SDY_3436 methylase for 50S ribosomal subunit protein L11RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS3193564 882 + 0.545351
proS SDY_0213 proline tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS218029 1719 - 0.541012
pth SDY_1253 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1160020 585 - 0.499145
queA SDY_0329 probable S-adenosylmethionine:tRNA ribosyltransferase-isomeraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS317827 1071 - 0.542484
rbfA SDY_3346 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS3103488 402 - 0.524876
rhlB SDY_3969 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS3697522 1266 + 0.518957
rhlE SDY_0806 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS752216 1365 - 0.561905
rimJ SDY_2086 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5SubName: Full=Acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; chromosome CDS1895321 585 - 0.492308
rimK SDY_0743 ribosomal protein S6 modification proteinRecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Poly-alpha-glutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; chromosome CDS691731 903 - 0.559247
rimL SDY_1751 acetyl transferaseSubName: Full=Acetyl transferase; chromosome CDS1593936 540 - 0.442593
rmf SDY_0926 ribosome modulation factorRecName: Full=Ribosome modulation factor; Short=RMF; chromosome CDS877056 168 + 0.541667
rnd SDY_1708 RNase DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1559974 1128 - 0.538121
rne SDY_2067 RNase ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS1876396 3186 + 0.553672
rnpA SDY_4186 RNase P, protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS3920372 360 + 0.555556
rph SDY_4074 RNase PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome CDS3809358 717 - 0.560669
rplA SDY_3744 50S ribosomal subunit protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS3479085 705 - 0.514894
rplB SDY_3493 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS3232981 822 - 0.524331
rplC SDY_3496 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS3234735 630 - 0.514286
rplD SDY_3495 50S ribosomal subunit protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS3234119 606 - 0.529703
rplE SDY_3484 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS3229337 540 - 0.5
rplF SDY_3481 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS3228045 534 - 0.520599
rplI SDY_4372 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS4093687 450 + 0.495556
rplJ SDY_3743 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS3478175 498 - 0.526104
rplK SDY_3745 50S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS3479793 429 - 0.522144
rplL SDY_3742 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS3477743 366 - 0.464481
rplM SDY_3407 50S ribosomal subunit protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS3162242 429 - 0.508159
rplN SDY_3486 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS3230216 372 - 0.510753
rplO SDY_3477 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS3226543 435 - 0.535632
rplP SDY_3489 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS3231197 411 - 0.518248
rplQ SDY_3470 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS3222054 384 - 0.536458
rplR SDY_3480 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS3227682 354 - 0.533898
rplS SDY_2780 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS2575807 348 - 0.482759
rplT SDY_1811 50S ribosomal subunit protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS1648460 357 - 0.478992
rplU SDY_3367 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS3124399 312 - 0.483974
rplV SDY_3491 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS3232339 333 - 0.498498
rplW SDY_3494 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS3233820 303 - 0.475248
rplX SDY_3485 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS3229891 315 - 0.463492
rplY SDY_0894 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS841509 285 - 0.505263
rpmA SDY_3366 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS3124121 258 - 0.5
rpmB SDY_4067 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS3803707 237 - 0.527426
rpmC SDY_3488 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS3231006 192 - 0.536458
rpmD SDY_3478 50S ribosomal subunit protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS3226981 180 - 0.5
rpmE SDY_3801 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS3539529 213 - 0.488263
rpmF SDY_2061 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1872449 174 - 0.54023
rpmG SDY_4066 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS3803519 168 - 0.404762
rpmH SDY_4185 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS3920215 141 + 0.524823
rpmI SDY_1812 50S ribosomal subunit protein ARecName: Full=50S ribosomal protein L35; chromosome CDS1648869 198 - 0.489899
rpmJ SDY_3475 50S ribosomal subunit protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS3225056 117 - 0.478632
rpsA SDY_2347 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS2139536 1674 - 0.507766
rpsB SDY_0185 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS190136 726 + 0.509642
rpsC SDY_3490 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS3231620 702 - 0.507123
rpsD SDY_3472 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS3223493 621 - 0.505636
rpsE SDY_3479 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS3227164 504 - 0.5
rpsF SDY_4369 30S ribosomal subunit protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS4092697 396 + 0.527778
rpsG SDY_3502 30S ribosomal subunit protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS3240943 471 - 0.492569
rpsH SDY_3482 30S ribosomal subunit protein S8, and regulatorRecName: Full=30S ribosomal protein S8; chromosome CDS3228591 393 - 0.501272
rpsI SDY_3406 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS3161834 393 - 0.521628
rpsJ SDY_3497 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS3235397 312 - 0.554487
rpsK SDY_3473 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS3224147 390 - 0.517949
rpsL SDY_3503 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS3241510 375 - 0.533333
rpsM SDY_3474 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS3224553 357 - 0.515406
rpsN SDY_3483 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS3229017 306 - 0.526144
rpsO SDY_3344 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS3102126 270 - 0.514815
rpsP SDY_2783 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS2577561 249 - 0.51004
rpsQ SDY_3487 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS3230752 255 - 0.47451
rpsR SDY_4371 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS4093418 228 + 0.526316
rpsS SDY_3492 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS3232686 279 - 0.491039
rpsT SDY_0045 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS39604 264 - 0.465909
rpsU SDY_3249 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS3011084 216 + 0.518519
rsuA SDY_0896 16S pseudouridylate 516 synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS843828 696 + 0.530172
selB SDY_4213 selenocysteinyl-tRNA-specific translation factorSubName: Full=Selenocysteinyl-tRNA-specific translation factor; chromosome CDS3943823 1845 + 0.56477
serS SDY_2368 serine tRNA synthetase; also charges selenocystein tRNA with serineRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS2165833 1293 - 0.526682
sfhB SDY_2837 suppressor of ftsH mutationRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS2630800 981 - 0.529052
smpA SDY_2790 small protein A precursorRecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; chromosome CDS2585159 300 + 0.493333
spoU SDY_4083 putative RNA methylaseSubName: Full=Putative RNA methylase; chromosome CDS3818037 690 + 0.550725
srmB SDY_2817 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2607737 1335 + 0.545318
sun SDY_3465 conserved hypothetical proteinRecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; chromosome CDS3217643 1290 + 0.495349
tgt SDY_0328 tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS316645 1128 - 0.513298
thrS SDY_1814 threonine tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1649706 1929 - 0.499222
trmA SDY_3763 tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS3495136 1101 + 0.508629
trmD SDY_2781 tRNA methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS2576196 768 - 0.532552
trpS SDY_3695 tryptophan tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS3426512 1005 + 0.523383
truA SDY_2517 pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2315511 813 - 0.555966
truB SDY_3345 tRNA pseudouridine 5S synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS3102544 945 - 0.52381
tsf SDY_0186 protein chain elongation factor EF-TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS191119 852 + 0.496479
tufA SDY_3500 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS3237477 1185 - 0.533333
tufB SDY_3748 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS3481540 1185 - 0.535021
tyrS SDY_1860 tyrosine tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS1695449 1275 - 0.520784
valS SDY_4282 valine tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS4009180 2856 - 0.553221
yabO SDY_0082 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS78719 660 - 0.540909
yabP SDY_0081 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS77596 717 + 0.3947
yadB SDY_0160 putative tRNA synthetaseRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome CDS159515 927 - 0.533981
yadP SDY_0163 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS161830 540 - 0.559259
yaeJ SDY_0210 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS215862 423 + 0.536643
ybjF SDY_0736 putative enzymeRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome CDS684954 1128 - 0.544326
yceC SDY_2065 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1874864 960 - 0.515625
ycfB SDY_2019 conserved hypothetical proteinRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS1827448 1152 + 0.527778
ychF SDY_1252 putative GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS1158812 1092 - 0.510989
yciH SDY_1358 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1255239 330 + 0.484848
yciL SDY_1339 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1237404 873 + 0.54181
yciO SDY_1335 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1235319 657 + 0.48554
yeiP SDY_0908 putative elongation factorRecName: Full=Elongation factor P-like protein; chromosome CDS858289 828 - 0.508454
yfcB SDY_2530 putative adenine-specific methylaseRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome CDS2327600 1266 - 0.514218
yfhC SDY_2749 putative deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2551235 537 - 0.528864
yfiA SDY_2768 putative yhbH sigma 54 modulatorSubName: Full=Putative yhbH sigma 54 modulator; chromosome CDS2566779 342 - 0.461988
yfiF SDY_2824 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2613347 1038 - 0.563584
yfjA SDY_2782 conserved hypothetical proteinRecName: Full=Ribosome maturation factor RimM; chromosome CDS2576994 558 - 0.491039
ygcA SDY_3002 putative enzymeRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS2769674 1302 - 0.511521
ygjO SDY_3267 putative enzymeRecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; chromosome CDS3034742 1167 - 0.533847
yhbH SDY_3384 probable sigma-54 modulation proteinSubName: Full=Probable sigma-54 modulation protein; chromosome CDS3137422 288 + 0.444444
yhbY SDY_3361 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3119195 294 + 0.482993
yhdG SDY_3437 putative dehydrogenaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS3194774 966 + 0.52381
yibK SDY_4039 conserved hypothetical proteinRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS3776996 474 + 0.552743
yihZ SDY_3856 conserved hypothetical proteinRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS3588905 438 - 0.545662
yjbC SDY_4310 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS4038749 873 - 0.515464
yjbN SDY_4525 conserved hypothetical proteinRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS4233686 1038 - 0.530829
yjeA SDY_4399 putative lysyl-tRNA synthetaseRecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; chromosome CDS4116553 1008 + 0.515873
yjfH SDY_4409 conserved hypothetical proteinRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS4123832 732 - 0.558743
yjgF SDY_4262 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3996088 426 - 0.511737
yjgH SDY_4266 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3998374 396 - 0.469697
yjjT SDY_4630 putative enzymeRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS4334031 1032 - 0.556202
yleA SDY_0597 conserved hypothetical proteinRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS567017 1425 - 0.537544
ymfC SDY_2017 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1826345 624 + 0.522436
yohI SDY_2147 putative regulator proteinSubName: Full=Putative regulator protein; chromosome CDS1945818 576 + 0.520833
yqcB SDY_3008 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS2778965 783 - 0.53129
yrdC SDY_3459 conserved hypothetical proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS3213279 573 - 0.528796
yrfH SDY_3678 conserved hypothetical proteinRecName: Full=Heat shock protein 15; chromosome CDS3410412 402 - 0.529851