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2024-05-09 11:21:02

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Escherichia coli W3110, K-12

Number of genes found: 186

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Escherichia coli W3110, K-12
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
alaS alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS2818037 2631 - 0.536298
ansA cytoplasmic L-asparaginase IRecName: Full=L-asparaginase 1; EC=3.5.1.1; AltName: Full=L-asparaginase I; Short=L-ASNase I; AltName: Full=L-asparagine amidohydrolase I; chromosome CDS1852574 1017 + 0.511308
ansB periplasmic L-asparaginase IIRecName: Full=L-asparaginase 2; EC=3.5.1.1; AltName: Full=L-asparaginase II; Short=L-ASNase II; AltName: Full=L-asparagine amidohydrolase II; AltName: INN=Colaspase; Flags: Precursor; chromosome CDS3098338 1047 - 0.526266
argS arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS1961776 1734 + 0.532872
asnS asparaginyl tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS988007 1401 - 0.523911
aspS aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS1950464 1773 - 0.537507
cca fused tRNA nucleotidyl transferase and 2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphataseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS3200547 1239 + 0.56255
cysS cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS553834 1386 + 0.544733
dbpA ATP-dependent RNA helicase specific for 23S rRNARecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1411225 1374 + 0.519651
deaD ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; AltName: Full=Translation factor W2; chromosome CDS3305826 1890 - 0.555556
def peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS4206217 510 - 0.462745
dtd D-Tyr-tRNA(Tyr) deacylaseRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS3559229 438 - 0.550228
dusB tRNA-dihydrouridine synthase BRecName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-; chromosome CDS3410135 966 + 0.522774
dusC tRNA-dihydrouridine synthase CRecName: Full=tRNA-dihydrouridine synthase C; EC=1.-.-.-; chromosome CDS2232772 948 - 0.542194
efp Elongation factor EF-PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4380379 567 + 0.493827
flxA hypothetical proteinRecName: Full=Protein FlxA; chromosome CDS1648119 333 + 0.429429
fmt 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS4205255 948 - 0.528481
frr ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS192872 558 + 0.508961
fusA protein chain elongation factor EF-GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS4166902 2115 + 0.508274
glnS glutamyl-tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS706515 1665 + 0.524925
gltX glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2524703 1416 - 0.525424
glyQ glycine tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS3915097 912 + 0.561404
glyS glycine tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS3916018 2070 + 0.554106
gshB glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; chromosome CDS3090534 951 + 0.534175
hisS histidyl tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS2637957 1275 - 0.547451
hslR ribosome-associated heat shock protein Hsp15RecName: Full=Heat shock protein 15; Short=HSP15; chromosome CDS4110667 402 - 0.534826
ileS isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS22391 2817 + 0.557685
infA translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS926647 219 - 0.484018
infB fused protein chain initiation factor 2, IF2RecName: Full=Translation initiation factor IF-2; chromosome CDS3313197 2673 - 0.534231
infC protein chain initiation factor IF-3RecName: Full=Translation initiation factor IF-3; Contains: RecName: Full=Translation initiation factor IF-3, N-terminally processed; Contains: RecName: Full=Translation initiation factor IF-3S; chromosome CDS1801810 543 - 0.486188
kptA 2'-phosphotransferaseRecName: Full=RNA 2-phosphotransferase; EC=2.7.1.-; chromosome CDS4565610 555 + 0.508108
ksgA S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=High level kasugamycin resistance protein KsgA; AltName: Full=Kasugamycin dimethyltransferase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS51609 822 - 0.530414
leuS leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS672623 2583 - 0.533488
ligT 2'-5' RNA ligaseRecName: Full=2-5-RNA ligase; EC=6.5.1.-; chromosome CDS161501 531 - 0.559322
lysS lysine tRNA synthetase, constitutiveRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS3032313 1518 - 0.530962
lysU lysine tRNA synthetase, inducibleRecName: Full=Lysine--tRNA ligase, heat inducible; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS4357878 1518 - 0.474308
map methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS188712 795 - 0.504403
miaA delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS4403932 951 + 0.534175
miaB isopentenyl-adenosine A37 tRNA methylthiolaseRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS693953 1425 - 0.541754
pcnB poly(A) polymerase IRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; AltName: Full=Plasmid copy number protein; Flags: Precursor; chromosome CDS157729 1398 - 0.558655
pheS phenylalanine tRNA synthetase, alpha subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1799673 984 - 0.538618
pnp polynucleotide phosphorylase/polyadenylaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS3308888 2205 - 0.536961
poxA predicted lysyl-tRNA synthetaseRecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; AltName: Full=GX; chromosome CDS4387323 978 + 0.526585
prfA peptide chain release factor RF-1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS1266589 1083 + 0.530009
prfB peptide chain release factor RF-2RecName: Full=Peptide chain release factor 2; Short=RF-2; chromosome CDS3034864 1098 - 0.535519
prfC peptide chain release factor RF-3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS4614094 1590 + 0.540252
prfH predicted peptide chain release factorRecName: Full=Putative peptide chain release factor homolog; Short=RF-H; chromosome CDS253702 501 + 0.542914
prmA methylase for 50S ribosomal subunit protein L11RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS3408925 882 + 0.543084
prmB N5-glutamine methyltransferaseRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome CDS2452954 933 - 0.525188
prmC N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=M.EcoKHemKP; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein release factor methylation C; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS1267671 834 + 0.551559
proS prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Global RNA synthesis factor; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS217057 1719 - 0.545084
pth peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1259506 585 - 0.497436
queA S-adenosylmethionine:tRNAribosyltransferase-isom eraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS424235 1071 + 0.54155
rbfA 30s ribosome binding factorRecName: Full=Ribosome-binding factor A; AltName: Full=Protein P15B; chromosome CDS3312632 402 - 0.529851
relE toxin of the RelE-RelB toxin-antitoxin systemRecName: Full=mRNA interferase RelE; EC=3.1.-.-; AltName: Full=Endoribonuclease RelE; AltName: Full=Toxin RelE; chromosome CDS1647060 288 - 0.46875
rhlB ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS3671051 1266 + 0.525276
rhlE RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS831294 1365 + 0.567033
rimJ ribosomal-protein-S5-alanine N-acetyltransferaseRecName: Full=Ribosomal-protein-alanine acetyltransferase; EC=2.3.1.128; AltName: Full=Acetylating enzyme for N-terminal of ribosomal protein S5; chromosome CDS1127139 585 + 0.494017
rimK ribosomal protein S6 modification proteinRecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Polyglutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; chromosome CDS892389 903 + 0.562569
rimL ribosomal-protein-L7/L12-serineacetyltransferaseRecName: Full=Ribosomal-protein-serine acetyltransferase; EC=2.3.1.-; AltName: Full=Acetylating enzyme for N-terminal of ribosomal protein L7/L12; chromosome CDS1500652 540 + 0.433333
rimM 16S rRNA processing proteinRecName: Full=Ribosome maturation factor RimM; AltName: Full=21K; chromosome CDS2744026 549 - 0.489982
rlmB 23S rRNA (Gm2251)-methyltransferaseRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS4413955 732 + 0.562842
rluA pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32)RecName: Full=Ribosomal large subunit pseudouridine synthase A; EC=5.4.99.28; EC=5.4.99.29; AltName: Full=23S rRNA pseudouridine(746) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; AltName: Full=tRNA pseudouridine(32) synthase; chromosome CDS59687 660 - 0.539394
rluB 23S rRNA pseudouridylate synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; chromosome CDS1328566 876 + 0.537671
rluC 23S rRNA pseudouridylate synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase C; EC=5.4.99.24; AltName: Full=23S rRNA pseudouridine(955/2504/2580) synthase; AltName: Full=rRNA pseudouridylate synthase C; AltName: Full=rRNA-uridine isomerase C; chromosome CDS1146517 960 + 0.514583
rluD 23S rRNA pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; chromosome CDS2733687 981 - 0.528033
rmf ribosome modulation factorRecName: Full=Ribosome modulation factor; Short=RMF; AltName: Full=Protein E; chromosome CDS1016137 168 + 0.541667
rna ribonuclease IRecName: Full=Ribonuclease I; Short=RNase I; EC=3.1.27.6; AltName: Full=Enterobacter ribonuclease; Flags: Precursor; chromosome CDS643420 807 - 0.511772
rnd ribonuclease DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1888578 1128 - 0.54078
rne fused ribonucleaseE endoribonuclease and scaffold for formation of degradosomeRecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS1142759 3186 - 0.556497
rng ribonuclease GRecName: Full=Ribonuclease G; Short=RNase G; EC=3.1.26.-; AltName: Full=Cytoplasmic axial filament protein; chromosome CDS3396181 1470 - 0.521088
rnpA protein C5 component of RNase PRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS3755563 360 - 0.558333
rph chromosome pseudo3823866 687 + 0.561863
rplA 50S ribosomal subunit protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS3457098 705 - 0.516312
rplB 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS4189052 822 + 0.526764
rplC 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS4187490 630 + 0.514286
rplD 50S ribosomal subunit protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS4188130 606 + 0.529703
rplE 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS4192978 540 + 0.498148
rplF 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS4194276 534 + 0.520599
rplI 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS4430788 450 + 0.497778
rplJ 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; AltName: Full=50S ribosomal protein L8; chromosome CDS3456188 498 - 0.524096
rplK 50S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS3457806 429 - 0.522144
rplL 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; AltName: Full=L8; chromosome CDS3455756 366 - 0.461749
rplM 50S ribosomal subunit protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS3378078 429 - 0.505827
rplN 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS4192267 372 + 0.510753
rplO 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS4195877 435 + 0.535632
rplP 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS4191247 411 + 0.518248
rplQ 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS4200417 384 + 0.536458
rplR 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS4194819 354 + 0.536723
rplS 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS2742839 348 - 0.482759
rplT 50S ribosomal subunit protein L20 chromosome CDS1801107 357 - 0.481793
rplU 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS3332995 312 - 0.483974
rplV 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS4190183 333 + 0.498498
rplW 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS4188732 303 + 0.481848
rplX 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS4192649 315 + 0.460317
rplY 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS2285851 285 + 0.505263
rpmA 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS3332717 258 - 0.5
rpmB 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS3828741 237 + 0.531646
rpmC 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS4191657 192 + 0.541667
rpmD 50S ribosomal subunit protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS4195694 180 + 0.5
rpmE 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS3509456 213 - 0.492958
rpmF 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1148944 174 + 0.54023
rpmG 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS3828998 168 + 0.404762
rpmH 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS3755939 141 - 0.51773
rpmI 50S ribosomal subunit protein L35RecName: Full=50S ribosomal protein L35; AltName: Full=Ribosomal protein A; chromosome CDS1801516 198 - 0.5
rpmJ 50S ribosomal subunit protein L36RecName: Full=50S ribosomal protein L36; AltName: Full=Ribosomal protein B; chromosome CDS4197682 117 + 0.478632
rpsA 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS962417 1674 + 0.511947
rpsB 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS189874 726 + 0.513774
rpsC 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS4190533 702 + 0.509971
rpsD 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS4198741 621 + 0.507246
rpsE 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS4195187 504 + 0.501984
rpsF 30S ribosomal subunit protein S6RecName: Full=30S ribosomal protein S6; Contains: RecName: Full=30S ribosomal protein S6, fully modified isoform; Contains: RecName: Full=30S ribosomal protein S6, non-modified isoform; chromosome CDS4429798 396 + 0.525253
rpsG 30S ribosomal subunit protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS4166335 540 + 0.501852
rpsH 30S ribosomal subunit protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS4193871 393 + 0.501272
rpsI 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS3377670 393 - 0.524173
rpsJ 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS4187146 312 + 0.554487
rpsK 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS4198318 390 + 0.515385
rpsL 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS4165864 375 + 0.533333
rpsM 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS4197945 357 + 0.518207
rpsN 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS4193532 306 + 0.526144
rpsO 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS3311270 270 - 0.518519
rpsP 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS2744593 249 - 0.514056
rpsQ 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS4191848 255 + 0.47451
rpsR 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS4430519 228 + 0.526316
rpsS 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS4189890 279 + 0.487455
rpsT 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS20815 264 - 0.465909
rpsU 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS3209437 216 + 0.518519
rrmJ 23S rRNA methyltransferaseRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=Cell division protein FtsJ; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS3326890 630 - 0.504762
rsmB 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependentRecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; chromosome CDS4203920 1290 - 0.496899
rsmC 16S RNA m2G1207 methylaseRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS4611349 1032 - 0.557171
rsuA 16S rRNA pseudouridylate 516 synthaseRecName: Full=Ribosomal small subunit pseudouridine synthase A; EC=5.4.99.19; AltName: Full=16S pseudouridylate 516 synthase; AltName: Full=16S rRNA pseudouridine(516) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; chromosome CDS2283122 696 - 0.528736
rumA 23S rRNA (uracil-5)-methyltransferaseRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS2912355 1302 - 0.514593
rumB 23S rRNA m(5)U747 methyltransferaseRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome CDS898940 1128 + 0.546099
selB selenocysteinyl-tRNA-specific translation factorRecName: Full=Selenocysteine-specific elongation factor; AltName: Full=SelB translation factor; chromosome CDS3880554 1845 + 0.563686
serS seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serineRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS939850 1293 + 0.526682
smpA small membrane lipoproteinRecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; chromosome CDS2752261 342 + 0.494152
speG spermidine N1-acetyltransferase chromosome CDS1657898 561 + 0.468806
srmB ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2711552 1335 + 0.547566
tadA tRNA-specific adenosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2696010 537 - 0.541899
tdcF predicted L-PSP (mRNA) endoribonucleaseRecName: Full=Putative reactive intermediate deaminase TdcF; EC=3.5.4.-; chromosome CDS3258377 390 - 0.525641
tgt tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS425361 1128 + 0.513298
thrS threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1802356 1929 - 0.495594
trmA tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS3473411 1101 + 0.508629
trmD tRNA (guanine-1-)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS2743228 768 - 0.533854
trmH tRNA (Guanosine-2'-O-)-methyltransferaseRecName: Full=tRNA (guanosine(18)-2-O)-methyltransferase; EC=2.1.1.34; AltName: Full=tRNA [Gm18] methyltransferase; chromosome CDS3815211 690 - 0.553623
trmU tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS1194244 1107 - 0.537489
trpS tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS4126778 1005 + 0.520398
truA pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; Short=PSU-I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2440270 813 - 0.553506
truB tRNA pseudouridine synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=Protein p35; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS3311688 945 - 0.524868
tsf protein chain elongation factor EF-TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS190857 852 + 0.498826
tufA protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; AltName: Full=P-43; chromosome CDS4169087 1185 + 0.532489
tufB protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; AltName: Full=P-43; chromosome CDS3459553 1185 - 0.534177
tyrS tyrosyl-tRNA synthetase chromosome CDS1717662 1275 - 0.515294
valS valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS4485662 2856 - 0.545868
yadB glutamyl-Q tRNA(Asp) synthetaseRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome CDS159186 927 - 0.536138
yaeJ conserved hypothetical proteinRecName: Full=Peptidyl-tRNA hydrolase ArfB; Short=PTH; EC=3.1.1.29; AltName: Full=Alternative ribosome-rescue factor B; chromosome CDS214833 423 + 0.541371
yaiF hypothetical proteinRecName: Full=Putative uncharacterized acetyltransferase YaiX; EC=2.3.1.-; chromosome CDS381728 387 - 0.45478
ybfP hypothetical proteinRecName: Full=Uncharacterized lipoprotein YbfP; Flags: Precursor; chromosome CDS715834 495 + 0.454545
ycdK conserved hypothetical proteinRecName: Full=Putative aminoacrylate peracid reductase RutC; EC=1.-.-.-; chromosome CDS1072195 387 - 0.540052
ychF predicted GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS1258298 1092 - 0.510073
yciH conserved hypothetical proteinRecName: Full=Uncharacterized protein YciH; chromosome CDS1344372 327 + 0.498471
yciO conserved hypothetical proteinRecName: Full=Uncharacterized protein YciO; chromosome CDS1325812 621 + 0.481481
yebU predicted methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase F; EC=2.1.1.178; AltName: Full=16S rRNA m5C1407 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmF; chromosome CDS1921937 1440 + 0.518056
yeiP predicted elongtion factorRecName: Full=Elongation factor P-like protein; chromosome CDS2268784 573 + 0.499127
yfbG fused UDP-L-Ara4N formyltransferase and UDP-GlcA C-4'-decarboxylaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; AltName: Full=Polymyxin resistance protein PmrI; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS2372709 1983 + 0.511346
yfhQ predicted methyltransferaseRecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; chromosome CDS2661239 741 - 0.554656
yfiA cold shock protein associated with 30S ribosomal subunitRecName: Full=Ribosome-associated inhibitor A; AltName: Full=Protein Y; AltName: Full=SpotY; Short=pY; chromosome CDS2735810 342 + 0.461988
yfiF predicted methyltransferaseRecName: Full=Uncharacterized tRNA/rRNA methyltransferase YfiF; EC=2.1.1.-; chromosome CDS2716147 1038 - 0.56262
ygjO predicted methyltransferase small domainRecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; chromosome CDS3233395 1137 - 0.538259
yhbH predicted ribosome-associated, sigma 54 modulation proteinRecName: Full=Ribosome hibernation promoting factor; chromosome CDS3346028 288 + 0.447917
yhbY predicted RNA-binding proteinRecName: Full=RNA-binding protein YhbY; chromosome CDS3327645 294 + 0.486395
yibK predicted rRNA methylaseRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS3858727 474 - 0.550633
yjbC 23S rRNA pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase F; EC=5.4.99.21; AltName: Full=23S rRNA pseudouridine(2604) synthase; AltName: Full=rRNA pseudouridylate synthase F; AltName: Full=rRNA-uridine isomerase F; chromosome CDS4233944 873 + 0.515464
yjbN tRNA-dihydrouridine synthase ARecName: Full=tRNA-dihydrouridine synthase A; EC=1.-.-.-; chromosome CDS4265259 1038 + 0.536609
yjeJ hypothetical proteinRecName: Full=Uncharacterized protein YjeJ; chromosome CDS4378045 870 - 0.451724
yjgF ketoacid-binding proteinRecName: Full=2-iminobutanoate/2-iminopropanoate deaminase; EC=3.5.99.10; AltName: Full=Enamine/imine deaminase; chromosome CDS4475207 387 - 0.529716
yjgH predicted mRNA endoribonucleaseRecName: Full=RutC family protein YjgH; chromosome CDS4477494 396 - 0.472222
yjtD predicted rRNA methyltransferaseRecName: Full=Uncharacterized tRNA/rRNA methyltransferase LasT; EC=2.1.1.-; chromosome CDS4645622 687 + 0.497817
ykgM predicted ribosomal proteinRecName: Full=50S ribosomal protein L31 type B; chromosome CDS311738 264 - 0.458333
ykgM predicted ribosomal proteinRecName: Full=50S ribosomal protein L36 2; chromosome CDS311598 141 - 0.41844
yliG predicted SAM-dependent methyltransferaseRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS877132 1326 - 0.526395
ymfC 23S rRNA pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase E; EC=5.4.99.20; AltName: Full=rRNA pseudouridylate synthase E; AltName: Full=rRNA-uridine isomerase E; chromosome CDS1195875 654 - 0.512232
ymjA hypothetical proteinRecName: Full=Uncharacterized protein YmjA; chromosome CDS1359137 246 - 0.48374
yoaB conserved hypothetical proteinRecName: Full=RutC family protein YoaB; chromosome CDS1895081 345 + 0.515942
yqcB tRNA pseudouridine synthaseRecName: Full=tRNA pseudouridine synthase C; EC=5.4.99.26; AltName: Full=tRNA pseudouridine(65) synthase; AltName: Full=tRNA pseudouridylate synthase C; AltName: Full=tRNA-uridine isomerase C; chromosome CDS2921658 783 - 0.54023
yrdC dsRNA-binding proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=Ribosome maturation factor TsaC; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS4209001 573 + 0.521815