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2024-05-02 11:00:13

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Xanthomonas oryzae pv. oryzae MAFF 311018, MAFF 311018

Number of genes found: 172

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xanthomonas oryzae pv. oryzae MAFF 311018, MAFF 311018
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XOO0040 ATP-dependent RNA helicasechromosome CDS42078 1290 + 0.687597
XOO0193 conserved hypothetical proteinchromosome CDS203340 612 + 0.622549
XOO0318 peptidyl-tRNA hydrolasechromosome CDS350445 432 - 0.689815
XOO0320 pseudouridylate synthasechromosome CDS351607 717 - 0.662483
XOO0383 conserved hypothetical proteinchromosome CDS415583 1005 + 0.676617
XOO0401 Tryptophanyl-tRNA synthetasechromosome CDS432151 1290 + 0.623256
XOO0461 arginyl-tRNA synthetasechromosome CDS499116 1689 - 0.645944
XOO0480 tyrosyl-tRNA synthetasechromosome CDS518935 1212 + 0.619637
XOO0481 ISXoo3 transposase orfAchromosome CDS527041 264 - 0.587121
XOO0516 ribosomal protein L11 methyltransferasechromosome CDS561642 942 - 0.665605
XOO0539 conserved hypothetical proteinchromosome CDS588283 564 - 0.714539
XOO0546 polypeptide deformylasechromosome CDS596597 513 + 0.615984
XOO0547 Methionyl-tRNA formyltransferasechromosome CDS597503 924 + 0.700216
XOO0548 Sun proteinchromosome CDS598426 1314 + 0.689498
XOO0558 conserved hypothetical proteinchromosome CDS610388 441 + 0.662132
XOO0640 ribosomal RNA small subunit methyltransferase Cchromosome CDS693099 1068 + 0.681648
XOO0641 ribosomal small subunit pseudouridylate synthasechromosome CDS694163 714 + 0.638655
XOO0700 ATP-dependent RNA helicasechromosome CDS752189 1383 - 0.689082
XOO0737 prolyl-tRNA synthetasechromosome CDS794673 1752 - 0.651827
XOO0757 valyl-tRNA synthetasechromosome CDS813915 2943 - 0.620795
XOO0802 50S ribosomal protein L32chromosome CDS871892 195 + 0.610256
XOO0890 conserved hypothetical proteinchromosome CDS975596 417 + 0.664269
XOO0909 putative pseudouridylate synthasechromosome CDS995096 621 - 0.645733
XOO0975 peptide deformylasechromosome CDS1064862 516 + 0.598837
XOO1040 Ribonuclease PHchromosome CDS1133530 726 - 0.672176
XOO1047 translation initiation inhibitorchromosome CDS1139759 381 + 0.645669
XOO1050 50S ribosomal protein L31chromosome CDS1143449 243 + 0.547325
XOO1104 ribosomal protein S6 modification proteinchromosome CDS1201793 888 - 0.657658
XOO1121 TdcF proteinchromosome CDS1215936 504 + 0.615079
XOO1182 sigma-54 modulation proteinchromosome CDS1291894 318 - 0.619497
XOO1202 nucleotidyl transferasechromosome CDS1308045 711 - 0.632911
XOO1219 30S ribosomal protein S16chromosome CDS1329049 258 + 0.651163
XOO1220 Probable 16S rRNA processing protein rimMchromosome CDS1329350 513 + 0.60039
XOO1221 tRNA (guanine-N1-)-methyltransferasechromosome CDS1329928 780 + 0.670513
XOO1222 50S ribosomal protein L19chromosome CDS1330831 408 + 0.615196
XOO1224 heat shock protein 15 homologchromosome CDS1333695 408 + 0.651961
XOO1394 glutamyl-tRNA synthetasechromosome CDS1520729 1404 + 0.646724
XOO1438 ATP-dependent RNA helicasechromosome CDS1562870 1905 + 0.670341
XOO1440 pseudouridylate synthasechromosome CDS1567584 723 + 0.632089
XOO1481 ribosomal large subunit pseudouridine synthase Dchromosome CDS1622630 996 + 0.696787
XOO1506 50S ribosomal protein L21chromosome CDS1649638 321 + 0.607477
XOO1507 50S ribosomal protein L27chromosome CDS1649971 261 + 0.624521
XOO1509 30S ribosomal protein S20chromosome CDS1651608 270 - 0.603704
XOO1512 isoleucyl-tRNA synthetasechromosome CDS1654820 2832 + 0.653249
XOO1540 aspartyl-tRNA synthetasechromosome CDS1696018 1767 + 0.650255
XOO1558 pseudouridylate synthasechromosome CDS1712950 711 - 0.652602
XOO1646 glutathione synthetasechromosome CDS1795820 951 - 0.684543
XOO1654 ribosomal protein alanine acetyltransferasechromosome CDS1809418 624 + 0.650641
XOO1714 peptide chain release factor 3chromosome CDS1887766 1605 - 0.640498
XOO1755 RNA methyltransferasechromosome CDS1939158 1257 + 0.64996
XOO1772 mRNA 3'-end processing factorchromosome CDS1956914 1023 - 0.659824
XOO1799 conserved hypothetical proteinchromosome CDS1986076 603 + 0.635158
XOO1808 conserved hypothetical proteinchromosome CDS1994000 348 + 0.637931
XOO1863 ribosome recycling factorchromosome CDS2055144 558 - 0.612903
XOO1866 elongation factor Tschromosome CDS2057166 879 - 0.633675
XOO1867 30S ribosomal protein S2chromosome CDS2058214 804 - 0.624378
XOO1874 methionine aminopeptidasechromosome CDS2065522 777 + 0.6139
XOO1908 outer membrane proteinchromosome CDS2105278 396 - 0.608586
XOO1963 tRNA/rRNA methyltransferasechromosome CDS2169850 768 + 0.654948
XOO1988 seryl-tRNA synthetasechromosome CDS2192781 1350 + 0.597778
XOO2030 pseudouridylate synthasechromosome CDS2244891 1641 - 0.698964
XOO2048 50S ribosomal protein L36chromosome CDS2267285 126 - 0.603175
XOO2050 30S ribosomal protein S1chromosome CDS2268450 1686 + 0.61032
XOO2076 conserved hypothetical proteinchromosome CDS2298704 513 + 0.682261
XOO2114 histidyl-tRNA synthetasechromosome CDS2341105 1443 + 0.648649
XOO2247 polynucleotide adenyltransferasechromosome CDS2489873 1368 - 0.64693
XOO2285 initiation factor eIF-2Bchromosome CDS2545649 1065 - 0.68169
XOO2287 lysyl-tRNA synthetasechromosome CDS2547710 963 - 0.666667
XOO2292 50S ribosomal protein L9chromosome CDS2556551 450 - 0.644444
XOO2293 30S ribosomal protein S18chromosome CDS2557253 231 - 0.575758
XOO2294 30S ribosomal protein S6chromosome CDS2557495 432 - 0.611111
XOO2296 asparaginyl-tRNA synthetasechromosome CDS2558827 1395 + 0.631541
XOO2352 queuine tRNA-ribosyltransferasechromosome CDS2613641 1146 - 0.650087
XOO2353 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS2614856 1104 - 0.682065
XOO2411 initiation factor IF-1chromosome CDS2680825 219 + 0.552511
XOO2415 Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS2684776 1137 + 0.665787
XOO2455 conserved hypothetical proteinchromosome CDS2726719 624 + 0.599359
XOO2517 amino-acid acetyltransferasechromosome CDS2809791 774 - 0.648579
XOO2524 cysteinyl-tRNA synthetasechromosome CDS2817069 1431 + 0.653389
XOO2551 elongation factor Pchromosome CDS2843257 567 - 0.619048
XOO2555 tRNA/rRNA methyltransferasechromosome CDS2848267 765 - 0.677124
XOO2561 ATP-dependent RNA helicasechromosome CDS2854398 1377 + 0.67175
XOO2572 aminoacyl-tRNA synthetase:glutamyl homologchromosome CDS2866450 900 + 0.713333
XOO2586 ribonuclease Dchromosome CDS2884338 1092 + 0.650183
XOO2606 conserved hypothetical proteinchromosome CDS2906425 1455 + 0.637113
XOO2726 lysyl-tRNA synthetase heat induciblechromosome CDS3076927 1518 - 0.657444
XOO2727 peptide chain release factor 2chromosome CDS3078648 990 - 0.637374
XOO2755 elongation factor Pchromosome CDS3106898 567 + 0.611993
XOO2787 Isopentenyl transferasechromosome CDS3135591 750 - 0.604
XOO2791 alanyl-tRNA synthetasechromosome CDS3139395 2649 - 0.628917
XOO2799 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS3149641 984 - 0.661585
XOO2802 cell division proteinchromosome CDS3153648 633 - 0.636651
XOO2803 conserved hypothetical proteinchromosome CDS3154346 306 + 0.614379
XOO2925 pseudouridylate synthasechromosome CDS3307131 987 - 0.662614
XOO2926 ribonuclease Echromosome CDS3308519 3723 + 0.657266
XOO3022 phenylalanyl-tRNA synthetase beta chainchromosome CDS3424349 2379 - 0.660782
XOO3023 phenylalanyl-tRNA synthetase alpha chainchromosome CDS3426836 996 - 0.638554
XOO3024 50S ribosomal protein L20chromosome CDS3428086 360 - 0.602778
XOO3025 50S ribosomal protein L35chromosome CDS3428456 198 - 0.616162
XOO3026 initiation factor IF-3chromosome CDS3428902 480 - 0.597917
XOO3027 threonyl-tRNA synthetasechromosome CDS3429493 1905 - 0.628346
XOO3047 polynucleotide phosphorylasechromosome CDS3456081 2115 - 0.621277
XOO3048 30S ribosomal protein S15chromosome CDS3458361 261 - 0.570881
XOO3049 tRNA pseudouridine synthase Bchromosome CDS3458778 927 - 0.660194
XOO3050 ribosomal-binding factor Achromosome CDS3459784 393 - 0.651399
XOO3051 protein chain initiation factor IF-2chromosome CDS3460320 2721 - 0.648659
XOO3083 tRNA pseudouridine synthase Achromosome CDS3497087 774 - 0.661499
XOO3090 adenine-specific methylasechromosome CDS3504357 927 - 0.650485
XOO3098 conserved hypothetical proteinchromosome CDS3512620 1401 - 0.624554
XOO3130 ribonuclease Gchromosome CDS3549061 1500 - 0.644667
XOO3142 leucyl-tRNA synthetasechromosome CDS3563261 2643 - 0.653046
XOO3190 tRNA/rRNA methyltransferasechromosome CDS3610033 912 - 0.691886
XOO3362 50S ribosomal protein L17chromosome CDS3827914 384 - 0.627604
XOO3364 30S ribosomal protein S4chromosome CDS3829531 627 - 0.599681
XOO3365 30S ribosomal protein S11chromosome CDS3830173 393 - 0.610687
XOO3366 30S ribosomal protein S13chromosome CDS3830576 357 - 0.616247
XOO3368 50S ribosomal protein L15chromosome CDS3832637 444 - 0.632883
XOO3369 50S ribosomal protein L30chromosome CDS3833085 162 - 0.598765
XOO3370 30S ribosomal protein S5chromosome CDS3833269 543 - 0.627993
XOO3371 50S ribosomal protein L18chromosome CDS3833970 360 - 0.638889
XOO3372 50S ribosomal protein L6chromosome CDS3834418 528 - 0.617424
XOO3373 30S ribosomal protein S8chromosome CDS3834961 399 - 0.588972
XOO3374 30S ribosomal protein S14chromosome CDS3835565 306 - 0.591503
XOO3375 50S ribosomal protein L5chromosome CDS3835889 543 - 0.565378
XOO3376 50S ribosomal protein L24chromosome CDS3836443 318 - 0.610063
XOO3377 50S ribosomal protein L14chromosome CDS3836776 369 - 0.601626
XOO3378 30S ribosomal protein S17chromosome CDS3837159 270 - 0.57037
XOO3379 50S ribosomal protein L29chromosome CDS3837440 186 - 0.596774
XOO3380 50S ribosomal protein L16chromosome CDS3837625 414 - 0.618357
XOO3381 30S ribosomal protein S3chromosome CDS3838044 735 - 0.598639
XOO3382 50S ribosomal protein L22chromosome CDS3838796 342 - 0.587719
XOO3383 30S ribosomal protein S19chromosome CDS3839144 270 - 0.562963
XOO3384 50S ribosomal protein L2chromosome CDS3839420 828 - 0.634058
XOO3385 50S ribosomal protein L23chromosome CDS3840258 300 - 0.56
XOO3386 50S ribosomal protein L4chromosome CDS3840554 606 - 0.610561
XOO3387 50S ribosomal protein L3chromosome CDS3841172 651 - 0.614439
XOO3388 30S ribosomal protein S10chromosome CDS3841834 315 - 0.584127
XOO3389 elongation factor Tuchromosome CDS3843933 1191 - 0.619647
XOO3390 elongation factor Gchromosome CDS3845173 2118 - 0.610009
XOO3391 30S ribosomal protein S7chromosome CDS3847429 468 - 0.587607
XOO3392 30S ribosomal protein S12chromosome CDS3847909 375 - 0.616
XOO3395 50S ribosomal protein L7/L12chromosome CDS3857318 369 - 0.601626
XOO3396 50S ribosomal protein L10chromosome CDS3857741 534 - 0.642322
XOO3397 50S ribosomal protein L1chromosome CDS3858820 699 - 0.645207
XOO3398 50S ribosomal protein L11chromosome CDS3859522 429 - 0.60373
XOO3401 elongation factor Tuchromosome CDS3861359 1191 - 0.622166
XOO3402 GTP-binding proteinchromosome CDS3863048 1092 - 0.620879
XOO3403 Peptidyl-tRNA hydrolasechromosome CDS3864214 585 - 0.62906
XOO3404 50S ribosomal protein L25chromosome CDS3864850 636 - 0.602201
XOO3410 peptide chain release factor 1chromosome CDS3871311 1086 + 0.653775
XOO3421 asparaginasechromosome CDS3882332 486 + 0.604938
XOO3446 protoporphyrinogen oxidasechromosome CDS3903204 846 - 0.692671
XOO3488 pseudouridylate synthasechromosome CDS3953273 861 - 0.679443
XOO3505 glutaminyl-tRNA synthetasechromosome CDS3967746 1740 + 0.644828
XOO3513 conserved hypothetical proteinchromosome CDS3974672 561 + 0.670232
XOO3538 dimethyladenosine transferasechromosome CDS4001084 789 + 0.646388
XOO3567 conserved hypothetical proteinchromosome CDS4031709 999 + 0.672673
XOO3681 tRNA nucleotidyltransferasechromosome CDS4156437 1233 + 0.639903
XOO3752 cytosine deaminasechromosome CDS4244483 456 - 0.635965
XOO3874 conserved hypothetical proteinchromosome CDS4375504 198 - 0.646465
XOO3902 30S ribosomal protein S21chromosome CDS4401484 216 + 0.611111
XOO3928 30S ribosomal protein S9chromosome CDS4428466 393 - 0.636132
XOO3929 50S ribosomal protein L13chromosome CDS4428862 429 - 0.610723
XOO3975 tRNA/rRNA methyltransferasechromosome CDS4480789 477 - 0.622642
XOO4055 ATP-dependent RNA helicasechromosome CDS4572550 1725 - 0.681159
XOO4142 glycyl-tRNA synthetase beta chainchromosome CDS4671051 2238 - 0.64924
XOO4143 Glycyl-tRNA synthetase alpha chainchromosome CDS4673577 909 - 0.640264
XOO4268 pseudouridylate synthasechromosome CDS4824077 573 + 0.670157
XOO4295 50S ribosomal protein L28chromosome CDS4854213 237 + 0.599156
XOO4296 50S ribosomal protein L33chromosome CDS4854463 168 + 0.494048
XOO4371 Ribonuclease P protein componentchromosome CDS4939399 438 - 0.641553
XOO4372 50S ribosomal protein L34chromosome CDS4939875 141 - 0.673759