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2024-05-05 12:37:29

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Bordetella avium 197N, 197N

Number of genes found: 173

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella avium 197N, 197N
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BAV0893 conserved hypothetical proteinchromosome CDS940698 1026 + 0.662768
NA BAV2596 conserved hypothetical proteinchromosome CDS2805762 627 - 0.637959
NA BAV3378 putative glutamyl-tRNA synthetasechromosome CDS3668084 876 + 0.684932
NA BAV0813 conserved hypothetical proteinchromosome CDS854818 1140 - 0.672807
NA BAV0804 putative amidasechromosome CDS845805 1818 + 0.654565
NA BAV0285 putative amidasechromosome CDS296612 1410 - 0.644681
NA BAV1414 putative S-adenosyl-l-methionine transferasechromosome CDS1484613 1452 + 0.655647
NA BAV0208 putative radical SAM proteinchromosome CDS214072 1329 - 0.631302
NA BAV2244 putative acetyltransferasechromosome CDS2422369 501 - 0.626747
NA BAV2498 putative indoleacetamide hydrolasechromosome CDS2693188 1392 - 0.645833
NA BAV2497 putative acetyltransferasechromosome CDS2692659 525 + 0.617143
NA BAV1921 putative translation-inhibition endoribonucleasechromosome CDS2016630 387 - 0.581395
NA BAV1822 putative amidasechromosome CDS1912231 1428 - 0.67507
NA BAV0929 conserved hypothetical proteinchromosome CDS989315 594 - 0.678451
NA BAV2584 putative amidasechromosome CDS2793360 1380 + 0.686957
NA BAV3155 probable sigma(54) modulation proteinchromosome CDS3432245 333 + 0.573574
NA BAV1267 putative endoribonucleasechromosome CDS1360413 387 - 0.591731
NA BAV1749 putative RNA methyltransferasechromosome CDS1836306 774 + 0.636951
NA BAV1268 putative endoribonucleasechromosome CDS1360796 402 - 0.572139
NA BAV2123 putative tRNA/rRNA methyltransferasechromosome CDS2270391 741 - 0.632928
NA BAV0549 conserved hypothetical protein (partial)chromosome CDS573499 240 + 0.604167
NA BAV0996 putative amidasechromosome CDS1065024 1773 - 0.685279
NA BAV2666 putative amidasechromosome CDS2883094 1329 + 0.675696
NA BAV1097 conserved hypothetical proteinchromosome CDS1173038 354 + 0.59322
NA BAV1270 putative amidasechromosome CDS1362384 1440 - 0.593056
NA BAV2017 conserved hypothetical proteinchromosome CDS2160137 417 - 0.630695
NA BAV1885 putative acetyltransferasechromosome CDS1982511 561 - 0.613191
NA BAV1994 putative zinc-binding cytidine/deoxycytidylate deaminasechromosome CDS2136554 474 - 0.639241
NA BAV1419 putative adenine-specific methylasechromosome CDS1492419 891 - 0.619529
NA BAV0835 putative nucleic acid binding proteinchromosome CDS878649 1428 + 0.592437
NA BAV1624 putative acetyltransferasechromosome CDS1697224 714 + 0.620448
NA BAV3018 putative endoribonucleasechromosome CDS3282041 414 - 0.589372
NA BAV0692 putative nucleotidyl transferasechromosome CDS713630 675 - 0.697778
NA BAV1913 putative translation-inhibition endoribonucleasechromosome CDS2007434 378 - 0.558201
NA BAV0237 putative RNA methyltransferasechromosome CDS245957 471 + 0.653928
NA BAV3352 putative amidasechromosome CDS3639426 1290 - 0.633333
alaS BAV2356 alanyl-tRNA synthetasechromosome CDS2536135 2622 - 0.617849
amnE BAV0553 2-aminomuconate deaminasechromosome CDS577112 438 + 0.563927
ams BAV1108 ribonuclease Echromosome CDS1184285 3048 - 0.656824
ansB BAV0005 L-asparaginase IIchromosome CDS4346 1008 + 0.605159
argS BAV3361 arginyl-tRNA synthetasechromosome CDS3647501 1686 + 0.649466
aspS BAV0115 aspartyl-tRNA synthetasechromosome CDS120260 1791 + 0.610274
asuC BAV2265 tRNA pseudouridine synthase Achromosome CDS2442927 804 - 0.625622
asuD BAV1517 lysyl-tRNA synthetasechromosome CDS1568873 1515 - 0.620462
cafA BAV2228 ribonuclease Gchromosome CDS2400733 1464 + 0.586066
cca BAV0169 tRNA nucleotidyltransferasechromosome CDS172176 1068 + 0.646067
cysS BAV2562 cysteinyl-tRNA synthetasechromosome CDS2772991 1452 - 0.607438
dbpA BAV0670 ATP-independent RNA helicasechromosome CDS693530 1389 + 0.62635
def BAV0700 peptide deformylasechromosome CDS724490 534 - 0.61985
def BAV0202 peptide deformylasechromosome CDS208938 513 + 0.60039
drpA BAV2910 prolyl-tRNA synthetasechromosome CDS3167688 1731 + 0.607741
efp BAV2518 putative elongation factor Pchromosome CDS2725854 558 + 0.566308
far BAV2919 elongation factor Gchromosome CDS3175734 2118 - 0.582625
far1 BAV0022 elongation factor Gchromosome CDS27738 2103 + 0.589634
fit BAV1394 translation initiation factor IF-3chromosome CDS1465173 498 + 0.582329
fmt BAV0203 methionyl-tRNA formyltransferasechromosome CDS209568 936 + 0.686966
frr BAV1737 ribosome recycling factorchromosome CDS1823945 561 + 0.59893
ftsJ BAV0930 ribosomal RNA large subunit methyltransferase jchromosome CDS989927 660 + 0.566667
gatA BAV3178 glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS3452093 1533 + 0.692759
gatB BAV3179 glutamyl-tRNA(Asn/Gln) amidotransferase subunit Bchromosome CDS3453628 1458 + 0.638546
gatC BAV3177 glutamyl-tRNA(Gln) amidotransferase subunit Cchromosome CDS3451781 309 + 0.634304
glnS BAV2787 glutaminyl-tRNA synthetasechromosome CDS3015989 1761 + 0.624645
gltX BAV2977 glutamyl-tRNA synthetasechromosome CDS3235504 1404 + 0.624644
glyQ BAV0709 glycyl-tRNA synthetase alpha chainchromosome CDS733500 906 - 0.619205
glyS BAV0708 glycyl-tRNA synthetase beta chainchromosome CDS731363 2136 - 0.675562
gsh-II BAV1395 glutathione synthetasechromosome CDS1465826 957 + 0.603971
hemK BAV0298 protein methyltransferasechromosome CDS312051 810 + 0.65679
hisS BAV2343 histidyl-tRNA synthetasechromosome CDS2524567 1287 - 0.613831
hslR BAV1886 ribosome-associated heat shock proteinchromosome CDS1983068 411 - 0.642336
ileS BAV1411 isoleucyl-tRNA synthetasechromosome CDS1480040 2862 - 0.628931
infA BAV0055 translation initiation factor IF-1chromosome CDS51814 219 + 0.538813
infA BAV0882 translation initiation factor IF-1chromosome CDS929772 267 - 0.606742
infB BAV2394 translation initiation factor IF-2chromosome CDS2583753 3105 - 0.624477
ksgA BAV0696 dimethyladenosine transferasechromosome CDS719433 789 + 0.662864
lasT BAV2569 putative tRNA/rRNA methyltransferasechromosome CDS2780387 804 + 0.65796
leuS BAV2492 leucyl-tRNA synthetasechromosome CDS2686574 2658 + 0.612114
map BAV1733 methionine aminopeptidasechromosome CDS1819685 822 - 0.619221
metG BAV0472 methionyl-tRNA synthetasechromosome CDS476289 2076 - 0.626686
miaA BAV0724 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS757271 939 - 0.671991
miaD BAV3345 peptide chain release factor 3chromosome CDS3631502 1608 + 0.61505
nusE BAV0024 30S ribosomal protein S10chromosome CDS31171 312 + 0.583333
omlA BAV2725 outer membrane lipoproteinchromosome CDS2951038 531 + 0.632768
pcnB BAV0720 poly(A) polymerasechromosome CDS753157 1359 - 0.644592
pheS BAV2067 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2207819 1023 - 0.611926
pheT BAV2066 phenylalanyl-tRNA synthetase beta chainchromosome CDS2205392 2415 - 0.64058
pnp BAV2667 polyribonucleotide nucleotidyltransferasechromosome CDS2884562 2157 - 0.615206
prfA BAV0297 peptide chain release factor 1chromosome CDS310975 1071 + 0.633053
prfB BAV1519 peptide chain release factor 2chromosome CDS1572218 1104 - 0.613225
prmA BAV2995 ribosomal protein L11 methyltransferasechromosome CDS3260752 918 - 0.653595
pth BAV0539 peptidyl-tRNA hydrolasechromosome CDS560665 624 + 0.641026
queA BAV0845 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS890443 1041 - 0.668588
ramA BAV0059 30S ribosomal protein S4chromosome CDS53018 624 + 0.594551
rbfA BAV2393 ribosome-binding factor Achromosome CDS2583329 399 - 0.591479
relC BAV0009 50S ribosomal protein L11chromosome CDS8309 432 + 0.606481
rfbF BAV1255 glucose-1-phosphate cytidylyltransferasechromosome CDS1348881 786 - 0.525445
rhlE BAV3343 putative ATP-dependent RNA helicasechromosome CDS3629392 1434 + 0.654812
rhlE BAV0171 putative ATP-dependent RNA helicasechromosome CDS174494 1779 - 0.669477
rhlE BAV2760 putative ATP-dependent RNA helicasechromosome CDS2985829 1434 - 0.638075
rimA BAV3413 50S ribosomal protein L34chromosome CDS3711798 135 + 0.666667
rimJ BAV0648 ribosomal-protein-alanine acetyltransferasechromosome CDS674113 585 + 0.623932
rimM BAV2350 16S rRNA processing proteinchromosome CDS2533686 573 - 0.628272
rluB BAV2397 ribosomal large subunit pseudouridine synthase Bchromosome CDS2589338 1374 - 0.658661
rluC BAV1109 ribosomal large subunit pseudouridine synthase Cchromosome CDS1187853 960 + 0.603125
rluD BAV1219 ribosomal large subunit pseudouridine synthase Dchromosome CDS1313123 963 + 0.642783
rluF BAV1651 ribosomal large subunit pseudouridine synthase F (pseudouridylate synthase)chromosome CDS1730072 732 + 0.612022
rnpA BAV3414 ribonuclease P protein componentchromosome CDS3712053 363 + 0.663912
rph BAV1936 ribonuclease PHchromosome CDS2035008 735 - 0.658503
rplA BAV0010 50S ribosomal protein L1chromosome CDS8743 696 + 0.617816
rplB BAV0028 50S ribosomal protein L2chromosome CDS33567 828 + 0.61715
rplC BAV0025 50S ribosomal protein L3chromosome CDS31950 702 + 0.631054
rplD BAV0026 50S ribosomal protein L4chromosome CDS32656 618 + 0.600324
rplE BAV0046 50S ribosomal protein L5chromosome CDS47100 540 + 0.562963
rplF BAV0049 50S ribosomal protein L6chromosome CDS48371 534 + 0.604869
rplI BAV2172 50S ribosomal protein L9chromosome CDS2334751 456 - 0.598684
rplJ BAV0011 50S ribosomal protein L10chromosome CDS9682 525 + 0.605714
rplL BAV0012 50S ribosomal protein L7/L12chromosome CDS10291 381 + 0.611549
rplM BAV2970 50S ribosomal protein L13chromosome CDS3226846 429 - 0.566434
rplN BAV0044 50S ribosomal protein L14chromosome CDS46388 369 + 0.593496
rplO BAV0053 50S ribosomal protein L15chromosome CDS50024 441 + 0.639456
rplP BAV0032 50S ribosomal protein L16chromosome CDS35822 417 + 0.609113
rplQ BAV0061 50S ribosomal protein L17chromosome CDS54963 396 + 0.598485
rplR BAV0050 50S ribosomal protein L18chromosome CDS48923 366 + 0.617486
rplS BAV1373 50S ribosomal protein L19chromosome CDS1445401 390 + 0.584615
rplT BAV2068 50S ribosomal protein L20chromosome CDS2208914 360 - 0.619444
rplU BAV0259 50S ribosomal protein L21chromosome CDS266291 312 - 0.560897
rplV BAV0030 50S ribosomal protein L22chromosome CDS34686 330 + 0.563636
rplW BAV0027 50S ribosomal protein L23chromosome CDS33270 297 + 0.569024
rplX BAV0045 50S ribosomal protein L24chromosome CDS46767 321 + 0.573209
rplY BAV0538 50S ribosomal protein L25chromosome CDS560020 597 + 0.626466
rpmA BAV0258 50S ribosomal protein L27chromosome CDS265998 261 - 0.624521
rpmB BAV2485 50S ribosomal protein L28chromosome CDS2680313 237 + 0.616034
rpmC BAV0033 50S ribosomal protein L29chromosome CDS36250 192 + 0.588542
rpmD BAV0052 50S ribosomal protein L30chromosome CDS49829 186 + 0.591398
rpmE2 BAV2408 50S ribosomal protein L31 type B-1chromosome CDS2599387 264 + 0.579545
rpmF BAV1117 50S ribosomal protein L32chromosome CDS1194411 183 + 0.562842
rpmG BAV2486 50S ribosomal protein L33chromosome CDS2680627 168 + 0.52381
rpmI BAV2069 50S ribosomal protein L35chromosome CDS2209289 198 - 0.575758
rpmJ BAV0056 50S ribosomal protein l36chromosome CDS52068 114 + 0.535088
rpsA BAV1354 30S ribosomal protein S1chromosome CDS1426148 1713 + 0.607706
rpsB BAV1734 30S ribosomal protein S2chromosome CDS1821296 750 + 0.589333
rpsC BAV0031 30S ribosomal protein S3chromosome CDS35025 795 + 0.620126
rpsE BAV0051 30S ribosomal protein S5chromosome CDS49304 522 + 0.60728
rpsF BAV2175 30S ribosomal protein S6chromosome CDS2335962 375 - 0.594667
rpsG BAV0021 30S ribosomal protein S7chromosome CDS27249 471 + 0.602972
rpsH BAV0048 30S ribosomal protein S8chromosome CDS47965 396 + 0.583333
rpsI BAV2969 30S ribosomal protein S9chromosome CDS3226444 393 - 0.605598
rpsK BAV0058 30S ribosomal protein S11chromosome CDS52605 402 + 0.599503
rpsL BAV0020 30S ribosomal protein S12chromosome CDS26703 378 + 0.592593
rpsM BAV0057 30S ribosomal protein S13chromosome CDS52224 366 + 0.595628
rpsN BAV0047 30S ribosomal protein S14chromosome CDS47649 306 + 0.607843
rpsO BAV2668 30S ribosomal protein S15chromosome CDS2886808 270 - 0.57037
rpsP BAV2352 30S ribosomal protein S16chromosome CDS2534586 261 - 0.613027
rpsQ BAV0034 30S ribosomal protein S17chromosome CDS36444 282 + 0.585106
rpsR BAV2173 30S ribosomal protein S18chromosome CDS2335221 273 - 0.571429
rpsS BAV0029 30S ribosomal protein S19chromosome CDS34407 276 + 0.565217
rpsT BAV2107 30S ribosomal protein S20chromosome CDS2254728 264 + 0.609848
rpsU BAV2331 30S ribosomal protein S21chromosome CDS2512458 213 - 0.58216
rsmB BAV0228 ribosomal RNA small subunit methyltransferasechromosome CDS234757 1329 + 0.668924
rumA BAV1976 23s rRNA (uracil-5-)-methyltransferasechromosome CDS2119237 1431 - 0.636618
selB (TCA) BAV3148 selenocysteine-specific elongation factorchromosome CDS3424270 1911 + 0.659341
serS BAV2685 seryl-tRNA synthetasechromosome CDS2902138 1350 - 0.606667
speG BAV2135 spermidine N(1)-acetyltransferasechromosome CDS2286471 585 - 0.533333
tgt BAV0844 queuine tRNA-ribosyltransferasechromosome CDS889310 1137 - 0.637643
thrS BAV1393 threonyl-tRNA synthetasechromosome CDS1463149 1953 + 0.572965
trmD BAV2349 tRNA (guanine-N1)-methyltransferasechromosome CDS2532874 813 - 0.629766
trmU BAV2145 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2294458 1113 - 0.586703
trpS BAV1213 tryptophanyl-tRNA synthetasechromosome CDS1303359 1323 + 0.609221
truB BAV2392 tRNA pseudouridine synthase Bchromosome CDS2582552 735 - 0.605442
tsf BAV1735 elongation factor Tschromosome CDS1822197 879 + 0.617747
tuf BAV0006 elongation factor Tuchromosome CDS5849 1191 + 0.61461
tuf BAV0023 elongation factor Tuchromosome CDS29917 1191 + 0.61461
tyrS BAV2963 tyrosyl-tRNA synthetasechromosome CDS3219857 1230 - 0.596748
valS BAV2348 valyl-tRNA synthetasechromosome CDS2529609 2886 + 0.617117