Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Streptococcus mutans UA159, UA159
Number of genes found: 144
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Streptococcus mutans UA159, UA159 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SMU.768c | conserved hypothetical protein | chromosome | CDS | 716480 | 318 | - | 0.295597 |
SMU.06 | putative GTP-binding protein | chromosome | CDS | 3461 | 1116 | + | 0.369176 | |
SMU.09 | conserved hypothetical protein | chromosome | CDS | 8852 | 273 | + | 0.304029 | |
SMU.1044c | putative pseudouridylate synthase | chromosome | CDS | 992786 | 891 | - | 0.356902 | |
SMU.1083c | conserved hypothetical protein | chromosome | CDS | 1027995 | 591 | - | 0.395939 | |
SMU.1125c | conserved hypothetical protein | chromosome | CDS | 1067632 | 597 | - | 0.331658 | |
SMU.120 | 50S ribosomal protein L28 | chromosome | CDS | 121103 | 189 | + | 0.365079 | |
SMU.1377c | conserved hypothetical protein | chromosome | CDS | 1305801 | 786 | - | 0.42112 | |
SMU.1388 | putative RNA helicase | chromosome | CDS | 1315663 | 1083 | + | 0.365651 | |
SMU.143c | putative polypeptide deformylase | chromosome | CDS | 147295 | 615 | - | 0.401626 | |
SMU.1505c | hypothetical protein | chromosome | CDS | 1430750 | 120 | - | 0.391667 | |
SMU.154 | 30S ribosomal protein S15 | chromosome | CDS | 156212 | 270 | + | 0.392593 | |
SMU.1558c | putative acetyltransferase | chromosome | CDS | 1482114 | 555 | - | 0.354955 | |
SMU.164 | putative tRNA/rRNA methyltransferase | chromosome | CDS | 166491 | 747 | + | 0.393574 | |
SMU.169 | 50S ribosomal protein L13 | chromosome | CDS | 169798 | 447 | + | 0.391499 | |
SMU.170 | 30S ribosomal protein S9 | chromosome | CDS | 170269 | 393 | + | 0.450382 | |
SMU.1707c | putative rRNA methylase | chromosome | CDS | 1617367 | 549 | - | 0.335155 | |
SMU.1724c | putative rRNA methylase | chromosome | CDS | 1630335 | 741 | - | 0.34143 | |
SMU.1779c | putative RNA methyltransferase | chromosome | CDS | 1679968 | 1380 | - | 0.371739 | |
SMU.1781 | conserved hypothetical protein | chromosome | CDS | 1682245 | 534 | + | 0.329588 | |
SMU.1800c | conserved hypothetical protein | chromosome | CDS | 1701412 | 309 | - | 0.401294 | |
SMU.1820c | putative glutamyl-tRNA(Gln) amidotransferase A subunit | chromosome | CDS | 1717441 | 1467 | - | 0.39332 | |
SMU.1821c | putative glutamyl-tRNA (Gln) amidotransferase subunit C | chromosome | CDS | 1718907 | 303 | - | 0.359736 | |
SMU.187c | conserved hypothetical protein | chromosome | CDS | 183417 | 978 | - | 0.421268 | |
SMU.1950 | putative pseudouridylate synthase | chromosome | CDS | 1829971 | 867 | + | 0.392157 | |
SMU.2003a | 50S ribosomal protein L36 | chromosome | CDS | 1882208 | 117 | - | 0.367521 | |
SMU.2023c | 30S ribosomal protein S19 | chromosome | CDS | 1891927 | 123 | - | 0.406504 | |
SMU.2024c | 50S ribosomal protein L4 | chromosome | CDS | 1892039 | 96 | - | 0.385417 | |
SMU.2026c | 30S ribosomal protein S10 | chromosome | CDS | 1893020 | 111 | - | 0.387387 | |
SMU.2043c | conserved hypothetical protein | chromosome | CDS | 1916514 | 447 | - | 0.404922 | |
SMU.2050c | putative methyltransferase | chromosome | CDS | 1924021 | 954 | - | 0.462264 | |
SMU.207c | putative transposon protein | chromosome | CDS | 203232 | 1233 | - | 0.343066 | |
SMU.2104a | 50S ribosomal protein L32 | chromosome | CDS | 1975771 | 183 | + | 0.431694 | |
SMU.2135c | 30S ribosomal protein S4 | chromosome | CDS | 1999236 | 612 | - | 0.403595 | |
SMU.2139c | 50S ribosomal protein L9 | chromosome | CDS | 2001818 | 453 | - | 0.315673 | |
SMU.2143c | putative tRNA | chromosome | CDS | 2007041 | 1122 | - | 0.40107 | |
SMU.2158c | putative tryptophanyl-tRNA synthetase | chromosome | CDS | 2020288 | 1023 | - | 0.338221 | |
SMU.304 | putative deaminase | chromosome | CDS | 292080 | 471 | + | 0.418259 | |
SMU.333 | hypothetical protein | chromosome | CDS | 314437 | 1236 | + | 0.358414 | |
SMU.340 | 50S ribosomal protein L34 | chromosome | CDS | 321953 | 135 | + | 0.459259 | |
SMU.349 | dimethyladenosine transferase | chromosome | CDS | 326715 | 876 | + | 0.458904 | |
SMU.357 | 30S ribosomal protein S12 | chromosome | CDS | 334095 | 414 | + | 0.408213 | |
SMU.358 | 30S ribosomal protein S7 | chromosome | CDS | 334526 | 471 | + | 0.422505 | |
SMU.359 | translation elongation factor G (EF-G) | chromosome | CDS | 335165 | 2082 | + | 0.40586 | |
SMU.40 | conserved hypothetical protein | chromosome | CDS | 44518 | 162 | + | 0.401235 | |
SMU.420 | putative ribosomal protein | chromosome | CDS | 392389 | 303 | + | 0.339934 | |
SMU.421 | translation initiation factor 2 | chromosome | CDS | 392712 | 2751 | + | 0.411487 | |
SMU.422 | ribosome binding factor A | chromosome | CDS | 395696 | 351 | + | 0.347578 | |
SMU.458 | putative ATP-dependent RNA helicase | chromosome | CDS | 426390 | 1344 | + | 0.366071 | |
SMU.481 | putative methionyl-tRNA formyltransferase | chromosome | CDS | 449333 | 948 | + | 0.386076 | |
SMU.489 | putative polyribonucleotide nucleotidyltransferase (general stress protein 13) | chromosome | CDS | 458420 | 393 | + | 0.3257 | |
SMU.500 | putative ribosome-associated protein | chromosome | CDS | 469160 | 549 | + | 0.360656 | |
SMU.558 | isoleucine-tRNA synthetase | chromosome | CDS | 520634 | 2793 | + | 0.385965 | |
SMU.583 | putative hemolysin | chromosome | CDS | 543797 | 828 | + | 0.387681 | |
SMU.608 | putative translation elongation and release factor | chromosome | CDS | 565446 | 1545 | + | 0.416828 | |
SMU.611 | putative ATP-dependent RNA helicase, DEAD-box family | chromosome | CDS | 574295 | 1554 | + | 0.421493 | |
SMU.638 | putative 16S pseudouridylate synthase | chromosome | CDS | 597135 | 717 | + | 0.436541 | |
SMU.650 | putative alanyl-tRNA synthetase (alanine--tRNA ligase) | chromosome | CDS | 609121 | 2619 | + | 0.43299 | |
SMU.697 | putative translation initiation factor IF3 | chromosome | CDS | 660634 | 531 | + | 0.382298 | |
SMU.698 | 50S ribosomal protein L35 | chromosome | CDS | 661199 | 201 | + | 0.41791 | |
SMU.699 | 50S ribosomal protein L20 | chromosome | CDS | 661444 | 360 | + | 0.388889 | |
SMU.714 | translation elongation factor EF-Tu | chromosome | CDS | 672868 | 1197 | + | 0.409357 | |
SMU.773c | lysyl-tRNA synthetase | chromosome | CDS | 722354 | 1491 | - | 0.407109 | |
SMU.788 | putative RNA methyltransferase | chromosome | CDS | 738555 | 1356 | + | 0.435841 | |
SMU.818 | 30S ribosomal protein S21 | chromosome | CDS | 763222 | 177 | + | 0.38983 | |
SMU.846 | 50S ribosomal protein L21 | chromosome | CDS | 797035 | 315 | + | 0.371429 | |
SMU.848 | conserved hypothetical protein | chromosome | CDS | 797361 | 336 | + | 0.357143 | |
SMU.849 | 50S ribosomal protein L27 | chromosome | CDS | 797718 | 294 | + | 0.428571 | |
SMU.850 | conserved hypothetical protein | chromosome | CDS | 798325 | 696 | + | 0.393678 | |
SMU.854 | putative pseudouridylate synthase | chromosome | CDS | 801530 | 891 | + | 0.417508 | |
SMU.865 | 30S ribosomal protein S16 | chromosome | CDS | 814687 | 276 | + | 0.402174 | |
SMU.957 | 50S ribosomal protein L10 | chromosome | CDS | 907994 | 504 | + | 0.406746 | |
SMU.960 | 50S ribosomal protein L7/L12 | chromosome | CDS | 908563 | 369 | + | 0.403794 | |
aldR | putative translation initiation inhibitor; aldR regulator homolog | chromosome | CDS | 1233240 | 378 | - | 0.380952 | |
ampM | putative methionine aminopeptidase A | chromosome | CDS | 1479960 | 861 | - | 0.433217 | |
argS | putative arginyl-tRNA synthase | chromosome | CDS | 1966643 | 1692 | + | 0.382388 | |
asnS | putative asparaginyl-tRNA synthetase | chromosome | CDS | 1235250 | 1347 | - | 0.418708 | |
aspG | putative L-asparaginase | chromosome | CDS | 1727002 | 960 | + | 0.416667 | |
aspS | aspartyl-tRNA synthetase | chromosome | CDS | 1970216 | 1770 | - | 0.39096 | |
cysS | putative cysteinyl-tRNA synthetase | chromosome | CDS | 160852 | 1344 | + | 0.383185 | |
efp | putative translation elongation factor P | chromosome | CDS | 1744849 | 561 | - | 0.381462 | |
eftS | putative translation elongation factor TS | chromosome | CDS | 1900382 | 1047 | - | 0.396371 | |
gatA | putative aspartyl-tRNA synthetase | chromosome | CDS | 1719336 | 1752 | - | 0.417237 | |
gatB | putative glutamyl-tRNA (Gln) amidotransferase subunit B | chromosome | CDS | 1716002 | 1440 | - | 0.403472 | |
gid | putative glucose-inhibited division protein | chromosome | CDS | 949332 | 1335 | + | 0.420225 | |
gltX | putative glutamyl-tRNA synthetase | chromosome | CDS | 311576 | 1458 | + | 0.397119 | |
hemK | putative protoporphyrinogen oxidase | chromosome | CDS | 1028578 | 837 | - | 0.376344 | |
hisS | histidyl-tRNA synthetase (histidine--tRNA ligase) | chromosome | CDS | 1972216 | 1290 | - | 0.381395 | |
if1 | putative translation initiation factor IF-1 | chromosome | CDS | 1882350 | 219 | - | 0.351598 | |
miaA | putative tRNA isopentenylpyrophosphate transferase | chromosome | CDS | 1404180 | 885 | - | 0.387571 | |
nylA | putative amidase | chromosome | CDS | 1160009 | 1443 | - | 0.444906 | |
papS | putative poly(A) polymerase | chromosome | CDS | 855756 | 1206 | + | 0.389718 | |
pnpA | polyribonucleotide nucleotidyltransferase | chromosome | CDS | 157228 | 2193 | + | 0.430005 | |
proS | putative prolyl-tRNA synthetase | chromosome | CDS | 1689405 | 1851 | - | 0.378174 | |
pth | putative peptidyl-tRNA hydrolase | chromosome | CDS | 4663 | 570 | + | 0.307018 | |
queA | putative S-adenosylmethionine--tRNA ribosyltransferase-isomerase | chromosome | CDS | 593404 | 1029 | - | 0.405248 | |
rf1 | putative peptide chain release factor 1 | chromosome | CDS | 1029411 | 1080 | - | 0.411111 | |
rf2 | putative peptide chain release factor (RF-2) | chromosome | CDS | 1249646 | 978 | - | 0.419223 | |
rimM | putative 16S rRNA processing protein | chromosome | CDS | 815301 | 519 | + | 0.350674 | |
rl1 | 50S ribosomal protein L1 | chromosome | CDS | 1552198 | 690 | - | 0.404348 | |
rl11 | 50S ribosomal L11 protein | chromosome | CDS | 1552985 | 426 | - | 0.41784 | |
rl14 | 50S ribosomal protein L14 | chromosome | CDS | 1889588 | 369 | - | 0.436314 | |
rl15 | 50S ribosomal protein L15 | chromosome | CDS | 1884859 | 441 | - | 0.399093 | |
rl16 | 50S ribosomal protein L16 | chromosome | CDS | 1890483 | 414 | - | 0.434783 | |
rl17 | 50S ribosomal protein L17 | chromosome | CDS | 1880033 | 387 | - | 0.395349 | |
rl18 | 50S ribosomal protein L18 | chromosome | CDS | 1886301 | 357 | - | 0.45098 | |
rl19 | 50S ribosomal protein L19 | chromosome | CDS | 1214632 | 348 | - | 0.422414 | |
rl22 | 50S ribosomal protein L22 | chromosome | CDS | 1891566 | 345 | - | 0.414493 | |
rl24 | 50S ribosomal protein L24 | chromosome | CDS | 1889117 | 306 | - | 0.366013 | |
rl29 | 50s ribosomal protein L29 | chromosome | CDS | 1890264 | 210 | - | 0.371429 | |
rl3 | 50S ribosomal protein L3 | chromosome | CDS | 1892159 | 627 | - | 0.417863 | |
rl30 | 50S ribosomal protein L30 | chromosome | CDS | 1885592 | 183 | - | 0.371585 | |
rl31 | 50S ribosomal protein L31 | chromosome | CDS | 1224161 | 243 | + | 0.395062 | |
rl33 | 50S ribosomal protein L33 | chromosome | CDS | 1540373 | 147 | - | 0.312925 | |
rl5 | 50S ribosomal protein L5 | chromosome | CDS | 1888551 | 543 | - | 0.394107 | |
rl6 | 50S ribosomal protein L6 (BL10) | chromosome | CDS | 1886747 | 537 | - | 0.392924 | |
rluB | putative pseudouridylate synthase B, large subunit | chromosome | CDS | 1621503 | 723 | - | 0.403873 | |
rnpA | putative ribonuclease P protein component | chromosome | CDS | 318879 | 360 | + | 0.344444 | |
rrf1 | putative ribosome recycling factor | chromosome | CDS | 1550379 | 558 | - | 0.378136 | |
rs1 | putative ribosomal protein S1; sequence specific DNA-binding protein | chromosome | CDS | 1140884 | 1200 | - | 0.414167 | |
rs11 | 30S ribosomal protein S11 | chromosome | CDS | 1881422 | 384 | - | 0.440104 | |
rs13 | 30S ribosomal protein S13 | chromosome | CDS | 1881823 | 366 | - | 0.404372 | |
rs14 | 30S ribosomal protein S14 | chromosome | CDS | 1888351 | 186 | - | 0.424731 | |
rs17 | 30S ribosomal protein S17 | chromosome | CDS | 1889983 | 261 | - | 0.371648 | |
rs18 | 30S ribosomal protein S18 | chromosome | CDS | 1755591 | 240 | - | 0.395833 | |
rs2 | 30S ribosomal protein S2 | chromosome | CDS | 1901495 | 786 | - | 0.402036 | |
rs20 | putative 30S ribosomal protein S20 | chromosome | CDS | 1069298 | 255 | + | 0.360784 | |
rs3 | 30S ribosomal protein S3 | chromosome | CDS | 1890900 | 627 | - | 0.419458 | |
rs5 | 30S ribosomal protein S5 | chromosome | CDS | 1885788 | 495 | - | 0.436364 | |
rs6 | 30S ribosomal protein S6 | chromosome | CDS | 1756371 | 291 | - | 0.360825 | |
rs8 | 30S ribosomal protein S8 | chromosome | CDS | 1887696 | 399 | - | 0.373434 | |
sunL | putative RNA-binding Sun protein; possible rRNA methylase | chromosome | CDS | 450270 | 1314 | + | 0.350076 | |
syfA | putative phenylalanyl-tRNA synthetase (alpha subunit) | chromosome | CDS | 1438234 | 1044 | - | 0.401341 | |
sygA | putative glycyl-tRNA synthetase (alpha subunit) | chromosome | CDS | 414774 | 918 | + | 0.412854 | |
sygB | putative glycyl-tRNA synthetase (beta subunit) | chromosome | CDS | 415694 | 2040 | + | 0.377941 | |
syl | putative leucyl-tRNA synthetase | chromosome | CDS | 1822003 | 2502 | - | 0.428457 | |
sys | putative seryl-tRNA synthetase | chromosome | CDS | 1779164 | 1281 | + | 0.412959 | |
syt1 | putative threonyl-tRNA synthetase | chromosome | CDS | 1515633 | 1950 | - | 0.430256 | |
syv | putative valyl-tRNA synthetase | chromosome | CDS | 1673267 | 2652 | - | 0.46003 | |
tgt | putative tRNA-guanine transglycosylase; queuine tRNA-ribosyltransferase | chromosome | CDS | 288082 | 1143 | + | 0.421697 | |
trmD | putative tRNA methyltransferase | chromosome | CDS | 815809 | 723 | + | 0.399723 | |
truA | putative tRNA pseudouridine synthase A | chromosome | CDS | 89443 | 750 | + | 0.409333 | |
truB | putative tRNA pseudouridine 5S synthase | chromosome | CDS | 1083855 | 882 | - | 0.397959 | |
tyrS | putative tyrosyl-tRNA synthetase | chromosome | CDS | 1867006 | 1269 | + | 0.379039 |