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2024-04-27 08:13:58

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Escherichia coli CFT073, CFT073

Number of genes found: 185

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli CFT073, CFT073
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA c4846 Hypothetical proteinchromosome CDS4608966 627 + 0.507177
NA c5211 Hypothetical proteinchromosome CDS4965038 1461 - 0.386721
ansA L-asparaginase Ichromosome CDS2008089 1017 + 0.500492
ansB L-asparaginase II precursorchromosome CDS3395541 1047 - 0.51958
argS Arginyl-tRNA synthetasechromosome CDS2111615 1734 + 0.529988
asnS Asparaginyl-tRNA synthetasechromosome CDS1038373 1401 - 0.526053
aspS Aspartyl-tRNA synthetasechromosome CDS2100303 1773 - 0.538071
c0277 Hypothetical proteinchromosome CDS260823 849 + 0.566549
c0385 Hypothetical proteinchromosome CDS364237 453 - 0.503311
c0406 Putative 50S ribosomal protein L36chromosome CDS387492 144 - 0.430556
c1478 Hypothetical proteinchromosome CDS1375014 252 - 0.412698
c1514 Hypothetical proteinchromosome CDS1395370 357 - 0.546219
c2396 Hypothetical proteinchromosome CDS2200253 315 - 0.352381
c2440 Hypothetical proteinchromosome CDS2252162 477 + 0.467505
c2457 Putative amidasechromosome CDS2275682 1488 - 0.563844
c2742 Hypothetical proteinchromosome CDS2585846 543 + 0.567219
c3139 Small protein Achromosome CDS3016191 342 + 0.497076
c3243 Hypothetical proteinchromosome CDS3095653 1113 + 0.5292
c4178 Hypothetical proteinchromosome CDS3960843 153 + 0.372549
c4561 Hypothetical proteinchromosome CDS4333119 1131 - 0.343943
c4754 Hypothetical proteinchromosome CDS4520103 258 - 0.395349
cafA Ribonuclease Gchromosome CDS3819525 1488 - 0.520833
cca tRNA nucleotidyltransferasechromosome CDS3642585 1239 + 0.560129
cysS Cysteinyl-tRNA synthetasechromosome CDS623669 1386 + 0.541847
dbpA ATP-independent RNA helicase dbpAchromosome CDS1648163 1374 + 0.517467
deaD Cold-shock DEAD-box protein Achromosome CDS3739604 1956 - 0.551125
def Peptide deformylasechromosome CDS3865057 510 + 0.466667
efp c5232 Elongation factor Pchromosome CDS4984420 567 + 0.495591
fmt Methionyl-tRNA formyltransferasechromosome CDS3865581 948 + 0.516878
frr Ribosome recycling factorchromosome CDS202905 558 + 0.505376
ftsJ Ribosomal RNA large subunit methyltransferase Jchromosome CDS3760667 630 - 0.504762
fusA Elongation factor Gchromosome CDS3902788 2115 - 0.508274
glnS Glutaminyl-tRNA synthetasechromosome CDS747912 1665 + 0.527928
gltX Glutamyl-tRNA synthetasechromosome CDS2800291 1416 - 0.526836
glyQ Glycyl-tRNA synthetase alpha chainchromosome CDS4162040 912 - 0.560307
glyS Glycyl-tRNA synthetase beta chainchromosome CDS4159961 2070 - 0.552657
gshB Glutathione synthetasechromosome CDS3387833 951 + 0.521556
hemK Protein methyltransferase hemKchromosome CDS1505970 834 + 0.555156
hisS Histidyl-tRNA synthetasechromosome CDS2907927 1275 - 0.545882
ileS Isoleucyl-tRNA synthetasechromosome CDS24653 2817 + 0.547746
infA Translation initiation factor IF-1chromosome CDS980354 219 - 0.484018
infB Translation initiation factor IF-2chromosome CDS3746975 2673 - 0.531987
infC Translation initiation factor IF-3chromosome CDS1956064 435 - 0.478161
iucB IucB proteinchromosome CDS3466470 948 - 0.565401
ksgA Dimethyladenosine transferasechromosome CDS54801 822 - 0.537713
lasT Hypothetical tRNA/rRNA methyltransferase lasTchromosome CDS5230697 708 + 0.484463
leuS Leucyl-tRNA synthetasechromosome CDS712192 2724 - 0.530103
lysS Lysyl-tRNA synthetasechromosome CDS3330630 1518 - 0.525692
lysU c5138 Lysyl-tRNA synthetase, heat induciblechromosome CDS4910097 1545 - 0.474434
map Methionine aminopeptidasechromosome CDS199010 795 - 0.50566
miaA c5255 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS5007412 951 + 0.53102
pcnB Poly(A) polymerasechromosome CDS168278 1419 - 0.558844
pheS Phenylalanyl-tRNA synthetase alpha chainchromosome CDS1953927 996 - 0.545181
pnp Polyribonucleotide nucleotidyltransferasechromosome CDS3742666 2223 - 0.530364
prfA Peptide chain release factor 1chromosome CDS1504888 1083 + 0.527239
prfB Peptide chain release factor 2chromosome CDS3332157 1099 - 0.534122
prfC Peptide chain release factor 3chromosome CDS5198335 1590 + 0.543396
prfH Peptide chain release factor homologchromosome CDS361716 615 + 0.543089
prmA Ribosomal protein L11 methyltransferasechromosome CDS3840838 882 + 0.544218
proS Prolyl-tRNA synthetasechromosome CDS228476 1773 - 0.539763
pth Peptidyl-tRNA hydrolasechromosome CDS1497805 585 - 0.500855
queA S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS499203 1071 + 0.53408
rbfA Ribosome-binding factor Achromosome CDS3746410 420 - 0.519048
rhlB Putative ATP-dependent RNA helicase rhlBchromosome CDS4464529 1266 - 0.522117
rhlE Putative ATP-dependent RNA helicase rhlEchromosome CDS853494 1362 + 0.563142
rimJ Ribosomal-protein-alanine acetyltransferasechromosome CDS1269062 585 + 0.494017
rimK Ribosomal protein S6 modification proteinchromosome CDS946342 903 + 0.559247
rimL Ribosomal-protein-serine acetyltransferasechromosome CDS1691409 555 + 0.428829
rluC Ribosomal large subunit pseudouridine synthase Cchromosome CDS1288440 960 + 0.515625
rna Ribonuclease I precursorchromosome CDS684789 825 - 0.515152
rnd Ribonuclease Dchromosome CDS2038536 1128 - 0.539007
rne Ribonuclease Echromosome CDS1284682 3186 - 0.557753
rnpA Ribonuclease P protein componentchromosome CDS4386230 360 + 0.561111
rph Ribonuclease PHchromosome CDS4246832 741 - 0.554656
rplA c4940 50S ribosomal protein L1chromosome CDS4711127 705 + 0.514894
rplB 50S ribosomal protein L2chromosome CDS3881919 822 - 0.526764
rplC 50S ribosomal protein L3chromosome CDS3883673 630 - 0.514286
rplD 50S ribosomal protein L4chromosome CDS3883057 606 - 0.531353
rplE 50S ribosomal protein L5chromosome CDS3878275 540 - 0.496296
rplF 50S ribosomal protein L6chromosome CDS3876983 534 - 0.522472
rplI c5294 50S ribosomal protein L9chromosome CDS5034176 450 + 0.497778
rplJ c4941 50S ribosomal protein L10chromosome CDS4712123 498 + 0.524096
rplK c4939 50S ribosomal protein L11chromosome CDS4710695 429 + 0.517483
rplL c4943 50S ribosomal protein L7/L12chromosome CDS4712687 366 + 0.461749
rplM 50S ribosomal protein L13chromosome CDS3801703 504 - 0.488095
rplN 50S ribosomal protein L14chromosome CDS3879154 372 - 0.510753
rplO 50S ribosomal protein L15chromosome CDS3875481 435 - 0.535632
rplP 50S ribosomal protein L16chromosome CDS3880135 411 - 0.515815
rplQ 50S ribosomal protein L17chromosome CDS3870992 384 - 0.533854
rplR 50S ribosomal protein L18chromosome CDS3876620 354 - 0.536723
rplS 50S ribosomal protein L19chromosome CDS3006881 348 - 0.482759
rplT 50S ribosomal protein L20chromosome CDS1955361 357 - 0.487395
rplV 50S ribosomal protein L22chromosome CDS3881277 333 - 0.498498
rplW 50S ribosomal protein L23chromosome CDS3882758 303 - 0.481848
rplX 50S ribosomal protein L24chromosome CDS3878829 315 - 0.457143
rplY 50S ribosomal protein L25chromosome CDS2572958 381 + 0.485564
rpmA 50S ribosomal protein L27chromosome CDS3766350 258 - 0.5
rpmB 50S ribosomal protein L28chromosome CDS4242436 237 - 0.531646
rpmC 50S ribosomal protein L29chromosome CDS3879944 192 - 0.541667
rpmD 50S ribosomal protein L30chromosome CDS3875919 180 - 0.5
rpmG 50S ribosomal protein L33chromosome CDS4242248 168 - 0.404762
rpmH 50S ribosomal protein L34chromosome CDS4386073 141 + 0.51773
rpsA 30S ribosomal protein S1chromosome CDS1012956 1674 + 0.511947
rpsB 30S ribosomal protein S2chromosome CDS199974 924 + 0.504329
rpsC 30S ribosomal protein S3chromosome CDS3880558 702 - 0.509971
rpsD 30S ribosomal protein S4chromosome CDS3872431 621 - 0.507246
rpsE 30S ribosomal protein S5chromosome CDS3876102 504 - 0.5
rpsF c5291 30S ribosomal protein S6chromosome CDS5033186 396 + 0.527778
rpsG 30S ribosomal protein S7chromosome CDS3904999 471 - 0.496815
rpsH 30S ribosomal protein S8chromosome CDS3877529 393 - 0.501272
rpsI 30S ribosomal protein S9chromosome CDS3801295 393 - 0.521628
rpsJ 30S ribosomal protein S10chromosome CDS3884335 312 - 0.554487
rpsK 30S ribosomal protein S11chromosome CDS3873085 390 - 0.515385
rpsL 30S ribosomal protein S12chromosome CDS3905566 435 - 0.508046
rpsM 30S ribosomal protein S13chromosome CDS3873491 357 - 0.518207
rpsN 30S ribosomal protein S14chromosome CDS3877955 306 - 0.526144
rpsO 30S ribosomal protein S15chromosome CDS3745048 270 - 0.518519
rpsP 30S ribosomal protein S16chromosome CDS3008635 309 - 0.511327
rpsQ 30S ribosomal protein S17chromosome CDS3879690 255 - 0.47451
rpsR c5292 30S ribosomal protein S18chromosome CDS5033907 228 + 0.526316
rpsS 30S ribosomal protein S19chromosome CDS3881624 279 - 0.491039
rpsT 30S ribosomal protein S20chromosome CDS23077 264 - 0.462121
rpsU 30S ribosomal protein S21chromosome CDS3651375 216 + 0.518519
rsuA Ribosomal small subunit pseudouridine synthase Achromosome CDS2570324 792 - 0.522727
selB Selenocysteine-specific elongation factorchromosome CDS4193717 1845 - 0.565854
serS Seryl-tRNA synthetasechromosome CDS993610 1293 + 0.526682
sfhB Ribosomal large subunit pseudouridine synthase Dchromosome CDS2997732 981 - 0.530071
speG Spermidine N(1)-acetyltransferasechromosome CDS1816891 561 + 0.468806
spoU tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS4255517 690 + 0.556522
srmB ATP-dependent RNA helicase srmBchromosome CDS2975763 1335 + 0.546816
sun SUN proteinchromosome CDS3866580 1290 + 0.49845
tgt Queuine tRNA-ribosyltransferasechromosome CDS500328 1128 + 0.512411
thrS Threonyl-tRNA synthetasechromosome CDS1956610 1929 - 0.494038
trmA c4928 tRNA (Uracil-5-)-methyltransferasechromosome CDS4694574 1101 - 0.503179
trmD tRNA (Guanine-N(1)-)-methyltransferasechromosome CDS3007270 768 - 0.533854
trpS Tryptophanyl-tRNA synthetasechromosome CDS3938687 1005 - 0.524378
truA tRNA pseudouridine synthase Achromosome CDS2716624 813 - 0.557196
truB tRNA pseudouridine synthase Bchromosome CDS3745466 945 - 0.528042
tsf Elongation factor Tschromosome CDS201032 852 + 0.495305
tufA Elongation factor Tuchromosome CDS3901533 1230 - 0.531707
tufB c4935 Elongation factor Tuchromosome CDS4708192 1185 + 0.531646
tyrS Tyrosyl-tRNA synthetasechromosome CDS1876477 1287 - 0.51826
valS c5358 Valyl-tRNA synthetasechromosome CDS5099818 2856 - 0.55042
yabO Ribosomal large subunit pseudouridine synthase Achromosome CDS61489 660 - 0.542424
yadB Hypothetical protein yadBchromosome CDS169735 927 - 0.536138
yadP 2'-5' RNA ligasechromosome CDS172050 540 - 0.564815
yaeJ Hypothetical protein yaeJchromosome CDS224867 423 + 0.543735
ybjF Hypothetical RNA methyltransferase ybjFchromosome CDS952882 1128 + 0.542553
ycdK Hypothetical protein ycdKchromosome CDS1105268 387 - 0.547804
ycfB tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1393561 1152 - 0.532118
ychF Probable GTP-binding protein ychFchromosome CDS1496597 1092 - 0.513736
yciH Protein yciHchromosome CDS1586948 330 + 0.493939
yciL Hypothetical protein yciLchromosome CDS1570452 876 + 0.534247
yciO Protein yciOchromosome CDS1567666 657 + 0.499239
yeiP Protein yeiPchromosome CDS2555730 828 + 0.503623
yfbG Hypothetical protein yfbGchromosome CDS2654421 1983 + 0.509329
yfcB Hypothetical adenine-specific methylase yfcBchromosome CDS2729306 1266 - 0.522907
yfhC Hypothetical protein yfhCchromosome CDS2960221 537 - 0.52514
yfhQ Hypothetical tRNA/rRNA methyltransferase yfhQchromosome CDS2930583 741 - 0.54251
yfiA Protein yfiAchromosome CDS2999854 342 + 0.461988
yfiF Hypothetical tRNA/rRNA methyltransferase yfiFchromosome CDS2980183 1113 - 0.566038
yfjA 16S rRNA processing protein rimMchromosome CDS3008068 558 - 0.489247
ygcA 23S rRNA (Uracil-5-)-methyltransferase rumAchromosome CDS3188517 1302 - 0.509985
ygjO Putative ribosomal RNA small subunit methyltransferase Dchromosome CDS3674810 1137 - 0.540018
yhaR TdcF proteinchromosome CDS3699101 453 - 0.518764
yhbH Probable sigma(54) modulation proteinchromosome CDS3779666 288 + 0.447917
yhbY Hypothetical protein yhbYchromosome CDS3761422 294 + 0.486395
yhdG Hypothetical protein yhdGchromosome CDS3842048 966 + 0.519669
yibK Hypothetical tRNA/rRNA methyltransferase yibKchromosome CDS4215398 474 + 0.548523
yihZ c4834 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS4599117 438 + 0.545662
yjbC c4988 Hypothetical protein yjbCchromosome CDS4766160 873 + 0.505155
yjbN c5018 Hypothetical protein yjbNchromosome CDS4792189 996 + 0.538153
yjeA c5243 Putative lysyl-tRNA synthetasechromosome CDS4991283 1059 + 0.519358
yjeJ c5230 Hypothetical protein yjeJchromosome CDS4982246 870 - 0.452874
yjfH c5264 Hypothetical tRNA/rRNA methyltransferase yjfHchromosome CDS5017346 732 + 0.564208
yjgF c5342 Protein yjgFchromosome CDS5087601 459 - 0.511983
yjjT Ribosomal RNA small subunit methyltransferase Cchromosome CDS5195590 1032 - 0.55814
ykgM 50S ribosomal protein L31 type B-1chromosome CDS387632 267 - 0.460674
yleA Hypothetical protein yleAchromosome CDS726403 1425 - 0.548772
yliG Hypothetical protein yliGchromosome CDS897604 1326 - 0.522624
yoaB Hypothetical protein yoaBchromosome CDS2044991 393 + 0.508906
yohI Hypothetical protein yohIchromosome CDS2521130 1017 - 0.531957
yqcB Hypothetical protein yqcBchromosome CDS3197819 783 - 0.542784
yrdC Protein yrdCchromosome CDS3862210 618 - 0.524272
yrfH Heat shock protein 15chromosome CDS3955401 402 + 0.527363