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2024-05-26 03:10:07

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Buchnera aphidicola str. Sg (Schizaphis graminum), Sg

Number of genes found: 115

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Buchnera aphidicola str. Sg (Schizaphis graminum), Sg
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
alaS alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS440181 2652 + 0.237557
argS arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS273397 1743 - 0.2358
asnS asparaginyl-tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS393231 1401 - 0.281228
aspS aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS349957 1755 + 0.243305
cca tRNA nucleotidyltransferaseRecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl- transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; chromosome CDS66445 1239 + 0.248588
cysS cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS537706 1392 - 0.243534
deaD ATP-dependent RNA helicase DEADRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS409915 1806 - 0.316722
def polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS545791 504 + 0.234127
efp elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS21429 564 + 0.257092
fmt methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS546330 945 + 0.260317
frr ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS258819 558 + 0.24552
ftsJ cell division protein FtsJRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS424732 621 - 0.278583
fusA elongation factor g (ef-g)RecName: Full=Elongation factor G; Short=EF-G; chromosome CDS562570 2109 - 0.323376
glnS glutaminyl-tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS450031 1704 + 0.238263
gltX glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS75128 1425 + 0.251228
glyQ glycyl-tRNA synthetase alpha chainRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS142755 879 - 0.265074
glyS glycyl-tRNA synthetase beta chainRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS140651 2076 - 0.223025
gshB glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; chromosome CDS584745 963 + 0.263759
hemK HemKRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS186370 828 + 0.247585
hisS histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS315534 1287 + 0.236985
ileS isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS157362 2817 - 0.247426
infA translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS349547 219 + 0.287671
infB initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS416304 2604 - 0.263825
ksgA dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS148228 825 + 0.215758
leuS leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS485213 2586 + 0.253287
lysS lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS477625 1512 + 0.236772
map methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS255297 786 - 0.270992
metG methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS114350 1638 + 0.24359
pheS phenylalanyl-tRNA synthetase alpha chainRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS134240 990 + 0.235354
pnp polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS412142 2124 - 0.306497
prfA peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS185288 1086 + 0.280847
prfC peptide chain release factor 3 (RF-3)RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS577410 1590 - 0.274843
proS prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS268140 1716 - 0.247086
pth peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS206048 534 + 0.237828
queA S-adenosylmethionine:tRNA ribosyltransferaseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS138018 1074 + 0.242086
rbfA ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS415871 375 - 0.218667
rimM 16S rRNA processing protein RimMRecName: Full=Ribosome maturation factor RimM; chromosome CDS433895 528 + 0.200758
rluC ribosomal large subunit pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase C; EC=5.4.99.24; AltName: Full=23S rRNA pseudouridine(955/2504/2580) synthase; AltName: Full=rRNA pseudouridylate synthase C; AltName: Full=rRNA-uridine isomerase C; chromosome CDS383734 945 + 0.261376
rluD ribosomal large subunit pseudouridine synthase dRecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; chromosome CDS438286 948 - 0.270042
rne ribonuclease ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS380518 2907 - 0.234606
rnpA ribonuclease P protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS14337 345 + 0.223188
rplA 50S ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS46191 696 - 0.288793
rplB 50S ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS558328 822 - 0.340633
rplC 50S ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS560087 630 - 0.315873
rplD 50S ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS559464 606 - 0.326733
rplE 50S ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS554697 540 - 0.305556
rplF 50S ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS553404 576 - 0.321181
rplI 50S ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS595163 453 - 0.260486
rplJ 50S ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS45446 498 - 0.269076
rplK 50S ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS46888 429 - 0.305361
rplL 50S ribosomal protein L7/l12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS45007 369 - 0.308943
rplM 50S ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS430157 429 - 0.261072
rplN 50S ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS555590 369 - 0.349593
rplO 50S ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS551891 435 - 0.317241
rplP 50S ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS556538 411 - 0.360097
rplQ 50S ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS547397 417 - 0.275779
rplR 50S ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS553037 366 - 0.29235
rplS 50S ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS435240 348 + 0.304598
rplT 50S ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS133729 357 + 0.322129
rplU 50S ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS427917 324 + 0.231481
rplV 50S ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS557682 333 - 0.324324
rplW 50S ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS559165 303 - 0.250825
rplX 50S ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS555252 315 - 0.250794
rplY 50S ribosomal protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS145504 291 + 0.250859
rpmA ribosomal protein l27RecName: Full=50S ribosomal protein L27; chromosome CDS428247 255 + 0.32549
rpmB 50S ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS87863 237 - 0.295359
rpmC 50S ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS556341 198 - 0.277778
rpmD 50S ribosomal protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS552330 180 - 0.288889
rpmE 50S ribosomal protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS612168 219 - 0.269406
rpmF ribosomal protein l32RecName: Full=50S ribosomal protein L32; chromosome CDS384782 165 + 0.321212
rpmG 50S ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS87690 168 - 0.22619
rpmH 50S ribosomal protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS14180 144 + 0.347222
rpmI 50S ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS133490 198 + 0.252525
rpmJ 50S ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS550411 117 - 0.34188
rpsA 30S ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS341938 1680 - 0.296429
rpsB 30S ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS256370 735 + 0.303401
rpsC 30S ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS556961 702 - 0.343305
rpsD 30S ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS548886 621 - 0.296296
rpsE 30S ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS552518 504 - 0.339286
rpsF 30S ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS595963 342 - 0.245614
rpsG 30S ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS564780 471 - 0.329087
rpsH 30S ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS553951 393 - 0.315522
rpsI 30S ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS429748 393 - 0.340967
rpsJ 30S ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS560753 312 - 0.375
rpsK 30S ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS549532 393 - 0.37659
rpsL 30S ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS565309 375 - 0.370667
rpsM 30S ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS549942 357 - 0.288515
rpsN 30S ribosomal protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS554374 306 - 0.349673
rpsO ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS414539 270 - 0.22963
rpsP ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS433641 258 + 0.282946
rpsQ 30S ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS556090 255 - 0.270588
rpsR 30S ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS595672 228 - 0.337719
rpsS 30S ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS558033 279 - 0.311828
rpsT 30S ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS161309 270 + 0.266667
rpsU 30S ribosomal protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS62833 216 - 0.351852
serS seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS346910 1284 - 0.267913
smpA small protein ARecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; chromosome CDS203016 315 + 0.203175
tgt queuine tRNA-ribosyltransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS139148 1107 + 0.264679
thrS threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS130947 1929 + 0.25661
trmD tRNA (guanine-n1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS434413 789 + 0.259823
trmU tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS287920 1104 + 0.248188
trpS tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS570794 1011 - 0.232443
truA tRNA pseudouridine synthase ARecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS216323 792 + 0.281566
truB tRNA pseudouridine synthase bRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS414910 939 - 0.268371
tsf elongation factor TS (EF-TS)RecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS257146 804 + 0.263682
tufB elongation factor Tu (EF-Tu)RecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS561327 1185 - 0.351899
tyrS tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS126368 1269 + 0.247439
valS valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS402181 2883 - 0.245578
ychF probable GTP-binding protein In trea-pthRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS206655 1089 + 0.257117
yciL hypothetical 30.2 kD protein in trpA 3' regionRecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; chromosome CDS307632 774 + 0.241602
yfhC hypothetical 20.0 kD protein in purL-dpjRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS282303 456 + 0.254386
yhaR hypothetical proteinRecName: Full=RutC family protein BUsg_359; chromosome CDS409462 387 + 0.217054
yjjT hypothetical 37.6 kD protein in fhuF-holDRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS365515 588 + 0.236395
yleA hypothetical 53.7 kD protein in cutE-glnXRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS482212 1320 + 0.266667
yrdC hypothetical 20.8 kD protein in aroE-smgRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS544483 573 - 0.293194