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2024-05-01 09:00:46

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Leptospira interrogans serovar Lai str. 56601, 56601

Number of genes found: 172

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Leptospira interrogans serovar Lai str. 56601, 56601
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LA1421 conserved hypothetical proteinchromosome I CDS1417735 555 - 0.365766
NA LA0268 unknown proteinchromosome I CDS263604 411 - 0.399027
NA LA2457 methionine aminopeptidasechromosome I CDS2433701 759 - 0.40975
NA LA0576 hypothetical proteinchromosome I CDS581690 1140 - 0.335965
NA LA0213 hypothetical proteinchromosome I CDS209694 573 + 0.350785
NA LA0292 RNA methyltransferasechromosome I CDS284811 1182 + 0.347716
NA LA3437 unknown proteinchromosome I CDS3397345 468 + 0.429487
NA LA2626 putative lipoproteinchromosome I CDS2610773 639 + 0.320814
NA LA3295 ribosome recycling factorchromosome I CDS3264764 555 - 0.407207
NA LA2396 methionyl-tRNA formyltransferasechromosome I CDS2364545 639 - 0.381847
NA LA2209 Predicted translation factor SUA5chromosome I CDS2187289 948 + 0.347046
NA LA2438 Polypeptide deformylasechromosome I CDS2411669 537 + 0.405959
NA LA1095 Acetyltransferaseschromosome I CDS1096458 222 + 0.378378
NA LA1273 unknown proteinchromosome I CDS1267951 501 - 0.363273
NA LA3204 hypothetical proteinchromosome I CDS3183121 204 + 0.318627
NA LA2349 Peptidyl-tRNA hydrolasechromosome I CDS2324736 573 - 0.354276
NA LA2873 conserved hypothetical proteinchromosome I CDS2854401 1269 - 0.37431
NA LA0695 hypothetical proteinchromosome I CDS700810 723 + 0.369295
NA LA0554 hypothetical proteinchromosome I CDS551866 258 + 0.329457
NA LA2917 Ribonuclease Dchromosome I CDS2888505 639 - 0.356808
NA LA0947 Polyribonucleotide nucleotidyltransferasechromosome I CDS941309 2097 + 0.395804
NA LA0787 SpoU rRNA Methylase family proteinchromosome I CDS794989 855 - 0.350877
NA LA0812 unknown proteinchromosome I CDS817172 354 + 0.384181
NA LA0737 Elongation factor Tuchromosome I CDS760747 1206 + 0.436153
NA LA2165 Peptide chain release factorchromosome I CDS2131069 468 + 0.33547
NA LA4049 ATP-dependent RNA helicasechromosome I CDS4024617 1566 + 0.386973
NA LA1094 aminoglycoside N6'-acetyltransferasechromosome I CDS1096219 243 + 0.386831
NA LA3862 conserved hypothetical proteinchromosome I CDS3824231 744 - 0.358871
NA LA1105 putative epimerasechromosome I CDS1107515 1350 + 0.397037
NA LB202 queuosine biosynthesis proteinchromosome II CDS194483 1059 - 0.350331
NA LA1217 probable Acetyltransferase, GNAT family proteinchromosome I CDS1218314 606 - 0.364686
NA LA3553 conserved hypothetical proteinchromosome I CDS3509303 999 + 0.386386
NA LA2977 RNA methyltransferasechromosome I CDS2954425 1365 + 0.320147
NA LA3435 ATP-dependent RNA helicasechromosome I CDS3394804 1623 - 0.378312
NA LA3557 Acetyltransferaseschromosome I CDS3512309 792 - 0.383838
NA LA3297 Translation elongation factor Tschromosome I CDS3266058 600 - 0.416667
NA LA2753 hypothetical proteinchromosome I CDS2732634 783 - 0.326948
NA LA0647 rRNA methylasechromosome I CDS652399 462 + 0.380952
NA LA0007 conserved hypothetical proteinchromosome I CDS11073 990 + 0.374747
NA LA2984 unknown proteinchromosome I CDS2963050 912 + 0.377193
NA LA0098 RNA methyltransferasechromosome I CDS101861 1248 + 0.330929
NA LA0009 unknownchromosome I CDS12655 738 + 0.342818
NA LA2543 hypothetical proteinchromosome I CDS2528936 126 + 0.293651
NA LA1870 hypothetical proteinchromosome I CDS1844343 255 + 0.282353
NA LA2995 unknown proteinchromosome I CDS2972080 324 + 0.385802
NA LA2295 LipL45 proteinchromosome I CDS2272712 1173 - 0.387894
NA LA0501 hypothetical proteinchromosome I CDS492599 219 - 0.305936
NA LA0388 conserved hypothetical proteinchromosome I CDS382316 1314 - 0.385084
NA LA3095 tRNA-guanine transglycosylasechromosome I CDS3072283 1125 + 0.397333
NA LA1455 hypothetical proteinchromosome I CDS1455724 261 + 0.436782
NA LA1581 mannose-1-phosphate guanyltransferasechromosome I CDS1574080 804 + 0.358209
NA LA0176 hypothetical proteinchromosome I CDS184756 153 + 0.326797
NA LA1954 unknown proteinchromosome I CDS1923576 357 + 0.319328
NA LA1596 methionyl-tRNA(fMet) N-formyltransferase proteinchromosome I CDS1587978 954 + 0.310273
NA LA3820 Peptidyl-tRNA hydrolasechromosome I CDS3782101 564 - 0.363475
NA LA3757 Acetyltransferaseschromosome I CDS3726328 678 - 0.342183
NA LA1862 tRNA/rRNA methyltransferasechromosome I CDS1835739 663 - 0.355958
NA LA0535 hypothetical proteinchromosome I CDS528555 954 - 0.336478
NA LA4091 Ribonuclease Dchromosome I CDS4062449 1266 + 0.35782
NA LA1138 conserved hypothetical proteinchromosome I CDS1142614 1314 + 0.394977
NA LA0021 predicted translation factor SUA5chromosome I CDS23057 609 + 0.325123
NA LA3315 Acetyltransferaseschromosome I CDS3278149 747 - 0.309237
NA LA2329 GTP-binding proteinchromosome I CDS2307638 1098 - 0.388889
NA LB294 elongation factor Pchromosome II CDS293655 717 - 0.379358
NA LA1189 probable sigma-54 modulation proteinchromosome I CDS1194261 288 + 0.322917
alaS LA3407 alanyl-tRNA synthetasechromosome I CDS3367293 2934 - 0.398432
amic LA1333 putative amidasechromosome I CDS1326606 1503 + 0.430472
argS LA1688 arginyl-tRNA synthetasechromosome I CDS1684372 1791 + 0.357901
asnS LA1866 asparaginyl-tRNA synthetasechromosome I CDS1839820 1308 + 0.393731
aspS LA1680 Aspartyl-tRNA synthetasechromosome I CDS1677306 1806 + 0.381506
codA LA4330 cytosine deaminasechromosome I CDS4303934 606 + 0.30198
cysS LA1863 Cysteinyl-tRNA synthetasechromosome I CDS1836491 1416 - 0.366525
fusA1 LA0313 Translation elongation and release factorchromosome I CDS310064 2121 - 0.423857
fusA2 LA0736 Translation elongation and release factorchromosome I CDS758831 1866 + 0.404609
gatA LA2507 glutamyl-tRNAGln amidotransferase subunit Achromosome I CDS2481108 1464 - 0.380464
gatB LA0256 glutamyl-tRNAGln amidotransferase subunit Bchromosome I CDS249960 1461 + 0.402464
gatC LA2508 Glu-tRNAGln amidotransferase subunit Cchromosome I CDS2482568 291 - 0.367698
gltX LA4190 Glutamyl-tRNA synthetasechromosome I CDS4158346 1566 - 0.378033
glyS LA1388 Glycyl-tRNA synthetasechromosome I CDS1381357 1395 - 0.387097
hemK LA0308 protoporphyrinogen oxidase HemKchromosome I CDS304004 861 - 0.336818
hisS1 LA0054 histidyl-tRNA synthetasechromosome I CDS57723 1320 - 0.362879
ileS LA1325 Isoleucyl-tRNA synthetasechromosome I CDS1317064 2745 + 0.3898
infA LA0761 Translation initiation factor IF-1chromosome I CDS773120 219 + 0.429224
infB1 LA0943 Translation initiation factor IF-2chromosome I CDS937088 2643 + 0.443057
infB2 LA2868 Putative translation initiation factor eIF-2Bchromosome I CDS2849208 1095 + 0.39726
infC LA1242 Translation initiation factor IF3chromosome I CDS1245801 540 + 0.383333
ksgA LA0405 dimethyladenosine transferasechromosome I CDS401414 942 - 0.354565
leuS LA3714 Leucyl-tRNA synthetasechromosome I CDS3668371 2487 + 0.395657
ligT LA0109 2'-5' RNA ligasechromosome I CDS115445 549 - 0.349727
lysS1 LA1995 Lysyl-tRNA synthetasechromosome I CDS1971908 1488 - 0.384409
lysS2 LB329 lysyl-tRNA synthetasechromosome II CDS325387 1017 - 0.351032
miaA LA1516 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome I CDS1518169 894 + 0.394855
papS LA1970 Poly(A) polymerasechromosome I CDS1945541 1299 - 0.342571
pcnB LA3002 Probable poly(A) polymerasechromosome I CDS2979090 1464 - 0.368852
pheS LA4150 Phenylalanyl-tRNA synthetase alpha chainchromosome I CDS4118731 1026 - 0.352827
prfA LA0114 Peptide chain release factor 1chromosome I CDS122863 1065 - 0.385915
prfB LA3767 Peptide chain release factor 2chromosome I CDS3734940 1104 + 0.40308
prfC LA2733 Peptide chain release factor 3chromosome I CDS2714116 1773 - 0.397067
prmA LA1391 ribosomal protein L11 methyltransferasechromosome I CDS1385286 903 + 0.380952
proS LA3290 prolyl-tRNA synthetasechromosome I CDS3258503 1731 - 0.383593
rbfA1 LA0944 ribosome binding factor Achromosome I CDS939740 354 + 0.423729
rfbA LA3802 glucose-1-phosphate thymidylyltransferasechromosome I CDS3765971 1047 + 0.39255
rfbF1 LA1631 Glucose-1-phosphate cytidylyltransferasechromosome I CDS1626991 768 + 0.404948
rfbM2 LA3892 GDP-mannose pyrophosphorylasechromosome I CDS3858359 729 - 0.347051
rimM LA2389 RimM protein, required for 16S rRNA processingchromosome I CDS2361116 531 - 0.367232
rluB LA2291 ribosomal large subunit pseudouridine synthase Bchromosome I CDS2268055 741 - 0.364372
rluC1 LA1490 Ribosomal large subunit pseudouridine synthase Cchromosome I CDS1490749 1098 + 0.313297
rluC2 LA2896 ribosomal large subunit pseudouridine synthase Cchromosome I CDS2872154 879 + 0.30603
rluD LA0223 ribosomal large subunit pseudouridine synthase Dchromosome I CDS221168 939 + 0.368477
rplA LA3423 ribosomal protein L1chromosome I CDS3385988 693 - 0.4329
rplB LA0742 ribosomal protein L2chromosome I CDS763875 840 + 0.442857
rplC LA0739 ribosomal protein L3chromosome I CDS762287 621 + 0.452496
rplD LA0740 ribosomal protein L4chromosome I CDS762925 636 + 0.389937
rplE LA0751 ribosomal protein L5chromosome I CDS767779 549 + 0.404372
rplF LA0754 ribosomal protein L6chromosome I CDS768980 540 + 0.385185
rplG LA3421 ribosomal protein L7/L12chromosome I CDS3384994 384 - 0.458333
rplI LA1678 ribosomal protein L9chromosome I CDS1675478 450 + 0.395556
rplJ LA3422 ribosomal protein L10chromosome I CDS3385427 534 - 0.434457
rplK LA3424 ribosomal protein L11chromosome I CDS3386687 429 - 0.452214
rplM LA3409 Ribosomal protein L13chromosome I CDS3370719 450 - 0.397778
rplN LA0749 ribosomal protein L14chromosome I CDS767024 393 + 0.424936
rplO LA0758 ribosomal protein L15chromosome I CDS770607 543 + 0.416206
rplP LA0746 ribosomal protein L16chromosome I CDS766049 414 + 0.432367
rplQ LA0766 ribosomal protein L17chromosome I CDS775891 516 + 0.339147
rplR LA0755 ribosomal protein L18chromosome I CDS769523 369 + 0.425474
rplS LA2387 Ribosomal protein L19chromosome I CDS2360055 417 - 0.381295
rplT LA1244 ribosomal protein L20chromosome I CDS1246576 354 + 0.392655
rplU LA0848 ribosomal protein L21chromosome I CDS849193 315 + 0.396825
rplV LA0744 ribosomal protein L22chromosome I CDS765004 333 + 0.408408
rplW LA0741 ribosomal protein L23chromosome I CDS763557 315 + 0.393651
rplX LA0750 ribosomal protein L24chromosome I CDS767416 360 + 0.347222
rplY LA3821 ribosomal protein L25chromosome I CDS3782711 639 - 0.413146
rpmA LA0851 ribosomal protein L27chromosome I CDS849820 255 + 0.431373
rpmB LA2162 ribosomal protein L28chromosome I CDS2129703 285 + 0.424561
rpmC LA0747 ribosomal protein L29chromosome I CDS766459 285 + 0.354386
rpmD LA0757 ribosomal protein L30chromosome I CDS770412 180 + 0.366667
rpmE LA1020 ribosomal protein L31chromosome I CDS1027423 204 - 0.382353
rpmF LA1263 Ribosomal protein L32chromosome I CDS1263031 201 + 0.378109
rpmH LA0175 ribosomal protein L34chromosome I CDS184417 162 + 0.425926
rpmI LA1243 ribosomal protein L35chromosome I CDS1246373 204 + 0.372549
rpsA1 LA0646 ribosomal protein S1chromosome I CDS651240 1155 + 0.365368
rpsA2 LA1260 Ribosomal protein S1chromosome I CDS1259667 1683 + 0.37552
rpsB LA3298 ribosomal protein S2chromosome I CDS3266669 885 - 0.418079
rpsC LA0745 ribosomal protein S3chromosome I CDS765349 678 + 0.396755
rpsD LA0764 ribosomal protein S4chromosome I CDS774266 624 + 0.405449
rpsE LA0756 ribosomal protein S5chromosome I CDS769854 546 + 0.417582
rpsF LA1675 ribosomal protein S6chromosome I CDS1674425 276 + 0.42029
rpsG LA3416 ribosomal protein S7chromosome I CDS3375610 474 - 0.409283
rpsH LA0753 ribosomal protein S8chromosome I CDS768552 402 + 0.385572
rpsI LA3408 ribosomal protein S9chromosome I CDS3370310 420 - 0.407143
rpsJ LA0738 ribosomal protein S10chromosome I CDS761967 309 + 0.411003
rpsK LA0763 ribosomal protein S11chromosome I CDS773844 411 + 0.445255
rpsL LA3417 ribosomal protein S12chromosome I CDS3376101 375 - 0.448
rpsM LA0762 ribosomal protein S13chromosome I CDS773464 378 + 0.402116
rpsN LA0752 ribosomal protein S14chromosome I CDS768347 186 + 0.446237
rpsO LA0946 ribosomal protein S15chromosome I CDS941007 291 + 0.323024
rpsP LA2391 ribosomal protein S16chromosome I CDS2361869 345 - 0.365217
rpsQ LA0748 ribosomal protein S17chromosome I CDS766753 270 + 0.366667
rpsR LA1677 ribosomal protein S18chromosome I CDS1675157 312 + 0.397436
rpsS LA0743 ribosomal protein S19chromosome I CDS764723 282 + 0.375887
rpsT LA3799 ribosomal protein S20chromosome I CDS3762362 267 + 0.378277
rpsU LA2229 Ribosomal protein S21chromosome I CDS2210359 258 + 0.352713
serS LA4339 Seryl-tRNA synthetasechromosome I CDS4312315 1254 - 0.363636
thrS LA1240 threonyl-tRNA synthetasechromosome I CDS1242400 1917 + 0.380282
tlyA LA0327 hemolysinchromosome I CDS324579 831 + 0.350181
trmD LA2388 tRNA (Guanine-N1)-methyltransferasechromosome I CDS2360431 696 - 0.405172
trmU LA1487 Probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome I CDS1486160 1128 + 0.393617
trpS LA0408 Tryptophanyl-tRNA synthetasechromosome I CDS405456 969 - 0.370485
truA LA2740 tRNA pseudouridine synthase Achromosome I CDS2721734 624 + 0.362179
truB LA0945 tRNA pseudouridine synthase Bchromosome I CDS940128 852 + 0.367371
tyrS LA2237 tyrosyl tRNA synthetasechromosome I CDS2217027 1218 + 0.360427
valS LA3763 Valyl-tRNA synthetasechromosome I CDS3729536 2406 + 0.402743