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2024-05-07 01:25:13

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Yersinia pestis KIM, KIM

Number of genes found: 181

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Yersinia pestis KIM, KIM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
alaS alanyl-tRNA synthetasechromosome CDS992238 2628 + 0.5
ansA cytoplasmic L-asparaginase Ichromosome CDS2389132 1017 + 0.476893
ansB periplasmic L-asparaginase IIchromosome CDS3082839 1038 - 0.467245
argS arginine tRNA synthetasechromosome CDS2494665 1731 + 0.499133
asnS asparagine tRNA synthetasechromosome CDS3045805 1401 + 0.498929
aspS aspartate tRNA synthetasechromosome CDS2486068 1797 - 0.510295
cafA cytoplasmic filament proteinchromosome CDS211201 1470 - 0.476871
cca tRNA nucleotidyl transferasechromosome CDS3913843 1239 + 0.533495
cysS cysteine tRNA synthetasechromosome CDS1245716 1431 + 0.494759
dbpA ATP-dependent RNA helicasechromosome CDS2792757 1383 - 0.501085
deaD inducible ATP-independent RNA helicasechromosome CDS781467 2010 + 0.535323
def peptide deformylasechromosome CDS4462047 513 - 0.452242
efp elongation factor P (EF-P)chromosome CDS691748 567 + 0.485009
fmt 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferasechromosome CDS4461075 948 - 0.470464
frr ribosome releasing factorchromosome CDS3446092 558 - 0.47491
ftsJ cell division proteinchromosome CDS763931 642 + 0.453271
fusA GTP-binding protein chain elongation factor EF-Gchromosome CDS4437385 2109 + 0.480797
glnS glutamine tRNA synthetasechromosome CDS1352518 1797 + 0.491375
gltX glutamate tRNA synthetase, catalytic subunitchromosome CDS1659754 1416 - 0.492232
glyQ glycine tRNA synthetase, alpha subunitchromosome CDS4540086 915 - 0.527869
glyS glycine tRNA synthetase, beta subunitchromosome CDS4538007 2070 - 0.523188
gshB glutathione synthetasechromosome CDS3655274 960 + 0.491667
hemK possible protoporphyrinogen oxidasechromosome CDS2525704 831 - 0.535499
hisS histidine tRNA synthetasechromosome CDS1505369 1275 + 0.508235
holE DNA polymerase III, theta subunitchromosome CDS2787116 270 + 0.444444
ileS isoleucine tRNA synthetasechromosome CDS4111052 2817 - 0.500887
infA protein chain initiation factor IF-1chromosome CDS3110712 219 + 0.497717
infB protein chain initiation factor IF-2chromosome CDS771942 2679 + 0.4972
infC protein chain initiation factor IF-3chromosome CDS2101260 351 + 0.475783
iucB acetyl CoA:N6-hydroxylsyine acetyl transferasechromosome CDS3727395 951 + 0.554154
ksgA S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferasechromosome CDS4094820 819 + 0.47619
leuS leucine tRNA synthetasechromosome CDS1327045 2583 - 0.510647
lysS lysine tRNA synthetasechromosome CDS3601776 1518 - 0.479578
map methionine aminopeptidasechromosome CDS954351 786 - 0.510178
map methionine aminopeptidasechromosome CDS3449864 792 + 0.488636
miaA delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS712247 942 + 0.511677
pcnB poly(A) polymerase Ichromosome CDS880112 1476 - 0.523713
pheS phenylalanine tRNA synthetase, alpha-subunitchromosome CDS2102797 984 + 0.47561
pnp polynucleotide phosphorylasechromosome CDS778073 2214 + 0.498645
prfA peptide chain release factor RF-1chromosome CDS2526534 1083 - 0.514312
prfB peptide chain release factor RF-2chromosome CDS3603303 933 - 0.46731
prfC peptide chain release factor RF-3chromosome CDS4169136 1590 - 0.497484
prmA methylase for 50S ribosomal subunit protein L11chromosome CDS227347 921 + 0.53203
proS proline tRNA synthetasechromosome CDS3422414 1719 + 0.499127
pth peptidyl-tRNA hydrolasechromosome CDS2532835 621 + 0.47182
queA probably S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS1120869 1071 + 0.513539
rbfA ribosome-binding factor Achromosome CDS774632 465 + 0.453763
rhlB putative ATP-dependent RNA helicasechromosome CDS400456 1287 - 0.486402
rimJ ribosomal-protein-alanine N-acetyltransferasechromosome CDS2506979 585 - 0.483761
rnd RNase Dchromosome CDS2462022 1161 - 0.477175
rne RNase Echromosome CDS1930742 3651 - 0.510819
rnpA RNase Pchromosome CDS4567376 360 + 0.508333
rph RNase PHchromosome CDS103145 717 - 0.51325
rplA 50S ribosomal subunit protein L1chromosome CDS537730 705 + 0.47234
rplB 50S ribosomal subunit protein L2chromosome CDS4444670 825 + 0.515152
rplC 50S ribosomal subunit protein L3chromosome CDS4443103 630 + 0.488889
rplD 50S ribosomal subunit protein L4chromosome CDS4443749 606 + 0.50165
rplE 50S ribosomal subunit protein L5chromosome CDS4448610 540 + 0.488889
rplF 50S ribosomal subunit protein L6chromosome CDS4449909 534 + 0.513109
rplI 50S ribosomal subunit protein L9chromosome CDS730390 453 + 0.494481
rplJ 50S ribosomal subunit protein L10chromosome CDS538799 498 + 0.493976
rplK 50S ribosomal subunit protein L11chromosome CDS537298 429 + 0.487179
rplL 50S ribosomal subunit protein L7/L12chromosome CDS539363 369 + 0.468835
rplM 50S ribosomal subunit protein L13chromosome CDS145814 444 - 0.490991
rplN 50S ribosomal subunit protein L14chromosome CDS4447899 372 + 0.502688
rplO 50S ribosomal subunit protein L15chromosome CDS4451509 435 + 0.510345
rplP 50S ribosomal subunit protein L16chromosome CDS4446863 411 + 0.508516
rplQ 50S ribosomal subunit protein L17chromosome CDS4456049 390 + 0.54359
rplR 50S ribosomal subunit protein L18chromosome CDS4450452 354 + 0.516949
rplS 50S ribosomal subunit protein L19chromosome CDS1006245 348 + 0.477012
rplT 50S ribosomal subunit protein L20chromosome CDS2101942 357 + 0.498599
rplU 50S ribosomal subunit protein L21chromosome CDS756483 360 + 0.463889
rplV 50S ribosomal subunit protein L22chromosome CDS4445802 333 + 0.501502
rplW 50S ribosomal subunit protein L23chromosome CDS4444351 303 + 0.485149
rplX 50S ribosomal subunit protein L24chromosome CDS4448281 315 + 0.460317
rplY 50S ribosomal subunit protein L25chromosome CDS3226637 285 + 0.463158
rpmA 50S ribosomal subunit protein L27chromosome CDS756862 258 + 0.488372
rpmC 50S ribosomal subunit protein L29chromosome CDS4447273 192 + 0.5
rpmD 50S ribosomal subunit protein L30chromosome CDS4451326 180 + 0.433333
rpmE 50S ribosomal subunit protein L31chromosome CDS319574 273 + 0.505495
rpmF 50S ribosomal subunit protein L32chromosome CDS1937327 168 + 0.553571
rpmG 50S ribosomal subunit protein L33chromosome CDS98285 168 - 0.392857
rpmH 50S ribosomal subunit protein L34chromosome CDS4567217 141 + 0.510638
rpsA 30S ribosomal subunit protein S1chromosome CDS3073855 1674 - 0.479092
rpsB 30S ribosomal subunit protein S2chromosome CDS3448704 810 - 0.47284
rpsC 30S ribosomal subunit protein S3chromosome CDS4446152 699 + 0.493562
rpsD 30S ribosomal subunit protein S4chromosome CDS4454373 621 + 0.478261
rpsE 30S ribosomal subunit protein S5chromosome CDS4450820 504 + 0.484127
rpsF 30S ribosomal subunit protein S6chromosome CDS729400 393 + 0.508906
rpsG 30S ribosomal subunit protein S7chromosome CDS4436821 471 + 0.47983
rpsH 30S ribosomal subunit protein S8, and regulatorchromosome CDS4449502 393 + 0.475827
rpsI 30S ribosomal subunit protein S9chromosome CDS145407 399 - 0.493734
rpsJ 30S ribosomal subunit protein S10chromosome CDS4442759 312 + 0.525641
rpsK 30S ribosomal subunit protein S11chromosome CDS4453953 390 + 0.502564
rpsL 30S ribosomal subunit protein S12chromosome CDS4436350 375 + 0.506667
rpsM 30S ribosomal subunit protein S13chromosome CDS4453580 357 + 0.504202
rpsN 30S ribosomal subunit protein S14chromosome CDS4449163 306 + 0.513072
rpsO 30S ribosomal subunit protein S15chromosome CDS776192 270 + 0.485185
rpsP 30S ribosomal subunit protein S16chromosome CDS1004567 249 + 0.502008
rpsR 30S ribosomal subunit protein S18chromosome CDS730123 228 + 0.473684
rpsT 30S ribosomal subunit protein S20chromosome CDS4115253 264 + 0.465909
rpsU 30S ribosomal subunit protein S21chromosome CDS3919191 216 + 0.462963
rsuA 16S pseudouridylate 516 synthasechromosome CDS3223497 708 - 0.519774
selB selenocysteinyl-tRNA-specific translation factorchromosome CDS4516344 1953 - 0.55658
serS serine tRNA synthetasechromosome CDS3095713 1293 - 0.491106
sfhB suppressor of ftsH mutationchromosome CDS1019458 978 + 0.482618
smpA small membrane protein Achromosome CDS3386972 351 + 0.45584
speG spermidine N1-acetyltransferasechromosome CDS1562612 546 - 0.39011
spoU putative RNA methylasechromosome CDS111081 693 + 0.496392
srmB ATP-dependent RNA helicasechromosome CDS1429871 1326 - 0.505279
sun hypothetical proteinchromosome CDS4459692 1290 - 0.460465
tccC1 putative toxin subunitchromosome CDS198944 2832 + 0.481992
tgt tRNA-guanine transglycosylasechromosome CDS1122032 1125 + 0.490667
thrS threonine tRNA synthetasechromosome CDS2099127 1929 + 0.473302
trmA tRNA (uracil-5-)-methyltransferasechromosome CDS351204 1104 - 0.477355
trmD tRNA (guanine-7-)-methyltransferasechromosome CDS1005367 798 + 0.518797
trpS tryptophan tRNA synthetasechromosome CDS4394039 1041 + 0.48415
truA pseudouridylate synthase Ichromosome CDS1767991 882 + 0.50907
truB tRNA pseudouridine 5S synthasechromosome CDS775096 975 + 0.494359
tsf protein chain elongation factor EF-Tschromosome CDS3447719 858 - 0.480186
tufB protein chain elongation factor EF-Tuchromosome CDS4439566 1185 + 0.481857
tufB protein chain elongation factor EF-Tuchromosome CDS534742 1185 + 0.479325
tyrS tyrosine tRNA synthetasechromosome CDS2165848 1287 + 0.487956
valS valine tRNA synthetasechromosome CDS827335 2898 - 0.519669
y0071 hypothetical proteinchromosome CDS80349 585 + 0.488889
y0155 putative sigma-54 modulation proteinchromosome CDS163684 108 + 0.361111
y0156 probable sigma-54 modulation proteinchromosome CDS163798 174 + 0.385057
y0163 hypothetical proteinchromosome CDS167848 426 + 0.476526
y0170 hypotheticalchromosome CDS175412 645 - 0.415504
y0213 putative dehydrogenasechromosome CDS228754 1068 + 0.5103
y0551 hypotheticalchromosome CDS618106 1080 - 0.525
y0554 hypotheticalchromosome CDS621131 1062 - 0.490584
y0574 hypothetical proteinchromosome CDS649215 1038 + 0.519268
y0618 putative lysyl-tRNA synthetasechromosome CDS696809 999 + 0.491491
y0638 hypothetical proteinchromosome CDS722960 741 + 0.538462
y0680 hypothetical proteinchromosome CDS763503 294 - 0.438776
y0789 putative tRNA synthetasechromosome CDS881676 1155 - 0.500433
y0793 hypothetical proteinchromosome CDS884396 576 - 0.565972
y0810 hypotheticalchromosome CDS907473 126 + 0.507937
y0895 hypothetical proteinchromosome CDS1004825 561 + 0.467023
y0910 putative yhbH sigma 54 modulatorchromosome CDS1017874 465 - 0.434409
y0920 hypothetical proteinchromosome CDS1036186 1182 + 0.532995
y0928 putative glutamyl-tRNA(gln) amidotransferase subunit Achromosome CDS1044498 1398 - 0.550072
y1048 putative ribosomal proteinchromosome CDS1181975 324 - 0.429012
y1068 putative glucose-1-phosphate cytidylyltransferasechromosome CDS1203414 786 + 0.437659
y1195 hypothetical proteinchromosome CDS1338920 1539 - 0.481481
y1307 putative deaminasechromosome CDS1449259 603 + 0.533997
y1332 putative ATP synthase beta subunitchromosome CDS1478572 774 + 0.502584
y1584 putative adenine-specific methylasechromosome CDS1751198 1002 + 0.48004
y1750 hypothetical proteinchromosome CDS1934904 1026 + 0.501949
y1799 hypothetical proteinchromosome CDS1979034 1116 - 0.499104
y1801 hypothetical proteinchromosome CDS1980775 627 - 0.492823
y1830 hypothetical proteinchromosome CDS2015426 408 - 0.426471
y1919 putative transformylasechromosome CDS2112386 2004 + 0.457585
y2053 hypothetical proteinchromosome CDS2261768 621 + 0.460548
y2054 hypothetical proteinchromosome CDS2262752 1035 + 0.510145
y2070 hypothetical proteinchromosome CDS2280805 327 + 0.477064
y2240 hypothetical proteinchromosome CDS2469182 345 + 0.486957
y2298 putative GTP-binding proteinchromosome CDS2533619 1092 + 0.495421
y2312 hypotheticalchromosome CDS2545915 1074 + 0.485102
y2313 hypotheticalchromosome CDS2547779 906 + 0.40287
y2355 hypotheticalchromosome CDS2595870 900 - 0.438889
y2407 hypotheticalchromosome CDS2678272 582 + 0.489691
y2845 putative enzymechromosome CDS3145392 1131 - 0.521662
y2901 putative elongation factorchromosome CDS3204538 642 + 0.457944
y3015 putative regulator proteinchromosome CDS3323569 945 - 0.486772
y3111 hypothetical proteinchromosome CDS3425034 441 - 0.489796
y3143 hypothetical proteinchromosome CDS3455475 774 - 0.48708
y3542 hypotheticalchromosome CDS3924909 513 - 0.419103
y3550 hypotheticalchromosome CDS3931393 405 - 0.511111
y3551 hypothetical proteinchromosome CDS3932082 381 - 0.354331
y3590 putative enzymechromosome CDS3983335 1191 - 0.496222
y3678 hypothetical proteinchromosome CDS4088198 621 + 0.489533
y3708 hypotheticalchromosome CDS4122538 2448 + 0.35335
y3753 putative enzymechromosome CDS4171842 1044 + 0.521073
y3782 hypotheticalchromosome CDS4202247 537 - 0.409683
y3800 hypothetical proteinchromosome CDS4219550 438 - 0.488584
y3834 pectate lyasechromosome CDS4266709 1719 + 0.4968
y3920 hypothetical proteinchromosome CDS4376839 408 - 0.522059
y4027 hypothetical proteinchromosome CDS4464830 585 + 0.466667
ysuH putative siderophore biosynthetic proteinchromosome CDS2906820 582 - 0.484536