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2024-05-07 15:00:02

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Xylella fastidiosa Temecula1, Temecula1

Number of genes found: 150

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Xylella fastidiosa Temecula1, Temecula1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PD0636 sigma-54 modulation proteinchromosome CDS785109 318 - 0.477987
NA PD1607 modification methylase NspVchromosome CDS1858516 1455 - 0.556014
NA PD1681 conserved hypothetical proteinchromosome CDS1950020 999 - 0.514515
NA PD1086 conserved hypothetical proteinchromosome CDS1287476 345 - 0.527536
NA PD1351 conserved hypothetical proteinchromosome CDS1573338 384 + 0.580729
NA PD1334 conserved hypothetical proteinchromosome CDS1560599 333 - 0.54955
NA PD0391 L-asparaginasechromosome CDS474686 486 - 0.49177
NA PD0497 conserved hypothetical proteinchromosome CDS593144 255 + 0.392157
NA PD0072 conserved hypothetical proteinchromosome CDS93334 306 + 0.473856
NA PD1240 conserved hypothetical proteinchromosome CDS1443573 360 - 0.436111
NA PD1761 conserved hypothetical proteinchromosome CDS2051445 1296 - 0.592593
NA PD0769 conserved hypothetical proteinchromosome CDS951363 420 + 0.564286
NA PD1706 translation initiation inhibitorchromosome CDS1989554 384 - 0.549479
NA PD1560 nucleotidyl transferasechromosome CDS1808981 723 + 0.565699
NA PD1768 conserved hypothetical proteinchromosome CDS2060862 564 + 0.570922
NA PD1936 translation initiation factor EIF-2Bchromosome CDS2276107 1065 - 0.580282
NA PD1492 tRNA/rRNA methyltransferasechromosome CDS1735291 759 - 0.565217
NA PD0831 conserved hypothetical proteinchromosome CDS1029905 312 + 0.516026
NA PD1184 toxin-like proteinchromosome CDS1383357 267 + 0.546816
NA PD1779 conserved hypothetical proteinchromosome CDS2070099 1428 + 0.547619
alaS PD0094 alanyl-tRNA synthetasechromosome CDS119363 2655 + 0.525047
argS PD0116 arginyl-tRNA synthetasechromosome CDS147780 1689 - 0.53878
asnS PD1947 asparaginyl-tRNA synthetasechromosome CDS2289479 1401 + 0.541042
aspS PD0946 aspartyl-tRNA synthetasechromosome CDS1143888 1770 + 0.511864
cafA PD0416 ribonuclease Gchromosome CDS510673 1494 + 0.522088
cca PD0602 tRNA nucleotidyl transferasechromosome CDS737874 1251 - 0.546763
cysS PD0287 cysteinyl-tRNA synthetasechromosome CDS364424 1425 - 0.583158
deaD PD0205 ATP-dependent RNA helicasechromosome CDS261295 1848 - 0.570887
def PD1763 polypeptide deformylasechromosome CDS2053766 513 - 0.538012
efp PD1253 elongation factor Pchromosome CDS1461783 567 + 0.550265
efp PD1490 elongation factor Pchromosome CDS1733472 567 - 0.511464
fcy1 PD0306 cytosine deaminasechromosome CDS385941 498 - 0.616466
fmt PD1762 methionyl-tRNA formyltransferasechromosome CDS2052737 924 - 0.589827
frr PD0331 ribosome recycling factorchromosome CDS424504 558 - 0.498208
ftsJ PD0071 cell division proteinchromosome CDS92623 642 - 0.496885
fusA PD1997 elongation factor Gchromosome CDS2352521 2118 - 0.466006
glnS PD0584 glutaminyl-tRNA synthetasechromosome CDS715624 1743 - 0.555364
gltX PD1848 glutamyl-tRNA synthetasechromosome CDS2166835 1404 + 0.57265
glyQ PD0840 glycyl-tRNA synthetase alpha chainchromosome CDS1040886 924 + 0.524892
glyS PD0841 glycyl-tRNA synthetase beta chainchromosome CDS1041901 2169 + 0.506224
gshB PD0844 glutathione synthetasechromosome CDS1046373 945 - 0.537566
hemK PD0728 protoporphyrinogen oxidasechromosome CDS892524 828 - 0.585749
hisS PD1270 histidyl-tRNA synthetasechromosome CDS1479126 1401 - 0.552463
ileS PD1437 isoleucyl-tRNA synthetasechromosome CDS1672364 2832 - 0.58863
infA PD0666 initiation factor IF-1chromosome CDS816413 219 - 0.43379
infB PD0194 translation initiation factor IF-2chromosome CDS244341 2679 + 0.516237
infC PD1915 initiation factor IF-3chromosome CDS2244925 465 - 0.47957
ksgA PD1208 dimethyladenosine transferasechromosome CDS1410144 798 + 0.5401
leuS PD1230 leucyl-tRNA synthetasechromosome CDS1431807 2664 + 0.540165
lysS PD1938 lysyl-tRNA synthetasechromosome CDS2278195 954 - 0.571279
lysU PD0404 lysyl-tRNA synthetasechromosome CDS494346 1521 + 0.5286
map PD0085 methionine aminopeptidasechromosome CDS107277 777 + 0.534106
metG PD1590 methionyl-tRNA synthetasechromosome CDS1841655 2109 + 0.571361
miaA PD0067 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS88481 954 - 0.532495
pcnB PD0185 polynucleotide adenyltransferasechromosome CDS234920 1185 + 0.520675
pheS PD1912 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2242816 1002 - 0.50499
pnp PD0198 polynucleotide phosphorylasechromosome CDS249040 2160 + 0.499537
prfA PD2022 peptide chain release factor 1chromosome CDS2378536 1086 + 0.56814
prfB PD0403 peptide chain release factor 2chromosome CDS493256 909 + 0.530253
prfC PD0142 peptide chain release factor 3chromosome CDS182199 1605 + 0.497819
prmA PD1251 ribosomal protein L11 methyltransferasechromosome CDS1460225 927 + 0.606257
proS PD1635 prolyl-tRNA synthetasechromosome CDS1892691 1695 - 0.501475
pth PD2014 peptidyl tRNA hydrolasechromosome CDS2371450 579 - 0.483592
queA PD0562 S-adenosylmethionine: tRNA ribosyltransferase-isomerasechromosome CDS690656 1044 + 0.511494
rbfA PD0195 ribosomal-binding factor Achromosome CDS247129 378 + 0.494709
rhlB PD2053 ATP-dependent RNA helicasechromosome CDS2419308 1632 - 0.515319
rhlE PD0157 ATP-dependent RNA helicasechromosome CDS200530 1341 + 0.515287
rimK PD1918 ribosomal protein S6 modification proteinchromosome CDS2249743 906 + 0.549669
rimM PD0082 16S rRNA processing proteinchromosome CDS104868 513 + 0.518519
rluC PD1982 pseudouridylate synthasechromosome CDS2329409 993 - 0.526687
rluD PD1755 ribosomal large subunit pseudouridine synthase Dchromosome CDS2044023 996 - 0.567269
rnd PD1904 ribonuclease Dchromosome CDS2234334 1089 + 0.523416
rne PD1983 ribonuclease Echromosome CDS2330801 3399 + 0.500441
rnpA PD2122 ribonuclease Pchromosome CDS2519116 408 - 0.448529
rph PD0722 ribonuclease PHchromosome CDS885458 726 + 0.563361
rplA PD2004 50S ribosomal protein L1chromosome CDS2366064 699 - 0.439199
rplB PD0440 50S ribosomal protein L2chromosome CDS538562 828 + 0.466184
rplC PD0437 50S ribosomal protein L3chromosome CDS536986 648 + 0.473765
rplD PD0438 50S ribosomal protein L4chromosome CDS537643 609 + 0.461412
rplE PD0449 50S ribosomal protein L5chromosome CDS542371 540 + 0.409259
rplF PD0452 50S ribosomal protein L6chromosome CDS543802 528 + 0.414773
rplI PD1943 50S ribosomal protein L9chromosome CDS2287401 450 - 0.548889
rplJ PD2003 50S ribosomal protein L10chromosome CDS2365033 528 - 0.467803
rplK PD2005 50S ribosomal protein L11chromosome CDS2366767 429 - 0.477855
rplL PD2002 50S ribosomal protein L7/L12chromosome CDS2364609 369 - 0.460705
rplM PD0752 50S ribosomal protein L13chromosome CDS926352 429 - 0.524476
rplN PD0447 50S ribosomal protein L14chromosome CDS541658 369 + 0.449865
rplO PD0456 50S ribosomal protein L15chromosome CDS545681 444 + 0.470721
rplP PD0444 50S ribosomal protein L16chromosome CDS540758 414 + 0.451691
rplQ PD0462 50S ribosomal protein L17chromosome CDS550236 381 + 0.43832
rplR PD0453 50S ribosomal protein L18chromosome CDS544416 360 + 0.477778
rplS PD0084 50S ribosomal protein L19chromosome CDS106440 411 + 0.489051
rplT PD1913 50S ribosomal protein L20chromosome CDS2244112 360 - 0.483333
rplU PD1443 50S ribosomal protein L21chromosome CDS1679917 321 - 0.52648
rplV PD0442 50S ribosomal protein L22chromosome CDS539679 336 + 0.449405
rplW PD0439 50S ribosomal protein L23chromosome CDS538248 303 + 0.40264
rplX PD0448 50S ribosomal protein L24chromosome CDS542042 318 + 0.40566
rplY PD2015 50S ribosomal protein L25chromosome CDS2372083 624 - 0.501603
rpmA PD1442 50S ribosomal protein L27chromosome CDS1679636 258 - 0.515504
rpmB PD0488 50S ribosomal protein L28chromosome CDS584054 237 + 0.535865
rpmC PD0445 50S ribosomal protein L29chromosome CDS541171 198 + 0.409091
rpmD PD0455 50S ribosomal protein L30chromosome CDS545513 162 + 0.407407
rpmE PD0749 50S ribosomal protein L31chromosome CDS923980 243 + 0.432099
rpmF PD1049 50S ribosomal protein L32chromosome CDS1252514 195 - 0.492308
rpmG PD0489 50S ribosomal protein L33chromosome CDS584304 165 + 0.430303
rpmH PD2123 50S ribosomal protein L34chromosome CDS2519582 141 - 0.482269
rpmI PD1914 50S ribosomal protein L35chromosome CDS2244482 198 - 0.525253
rpmJ PD1458 50S ribosomal protein L36chromosome CDS1699218 126 + 0.492063
rpsA PD1456 30S ribosomal protein S1chromosome CDS1696391 1677 - 0.486583
rpsB PD1960 30S ribosomal protein S2chromosome CDS2302451 801 - 0.534332
rpsC PD0443 30S ribosomal protein S3chromosome CDS540033 720 + 0.444444
rpsD PD0460 30S ribosomal protein S4chromosome CDS548425 627 + 0.425837
rpsE PD0454 30S ribosomal protein S5chromosome CDS544954 540 + 0.433333
rpsF PD1945 30S ribosomal protein S6chromosome CDS2288249 432 - 0.509259
rpsG PD1998 30S ribosomal protein S7chromosome CDS2354774 468 - 0.470085
rpsH PD0451 30S ribosomal protein S8chromosome CDS543391 399 + 0.401002
rpsI PD0751 30S ribosomal protein S9chromosome CDS925955 393 - 0.493639
rpsJ PD0436 30S ribosomal protein S10chromosome CDS536660 312 + 0.471154
rpsK PD0459 30S ribosomal protein S11chromosome CDS548018 393 + 0.445293
rpsL PD1999 30S ribosomal protein S12chromosome CDS2355257 375 - 0.509333
rpsM PD0458 30S ribosomal protein S13chromosome CDS547646 357 + 0.431373
rpsN PD0450 30S ribosomal protein S14chromosome CDS542927 306 + 0.411765
rpsO PD0197 30S ribosomal protein S15chromosome CDS248684 261 + 0.436782
rpsP PD0081 30S ribosomal protein S16chromosome CDS104564 261 + 0.54023
rpsQ PD0446 30S ribosomal protein S17chromosome CDS541365 270 + 0.388889
rpsR PD1944 30S ribosomal protein S18chromosome CDS2288007 231 - 0.445887
rpsS PD0441 30S ribosomal protein S19chromosome CDS539397 270 + 0.392593
rpsT PD1440 30S ribosomal protein S20chromosome CDS1678011 270 + 0.52963
rpsU PD1644 30S ribosomal protein S21chromosome CDS1903305 216 + 0.509259
rsuA PD0484 ribosomal small subunit pseudouridine synthasechromosome CDS580749 711 + 0.52602
serS PD1318 seryl-tRNA synthetasechromosome CDS1546548 1281 - 0.509758
smpA PD1375 outer membrane proteinchromosome CDS1598955 438 + 0.47032
tgt PD0180 queuine tRNA-ribosyltransferasechromosome CDS230067 1134 + 0.538801
thrS PD1916 threonyl-tRNA synthetasechromosome CDS2245520 1908 - 0.503145
trmA PD1385 RNA methyltransferasechromosome CDS1607330 1332 - 0.525526
trmD PD0083 tRNA (guanine-N1-)-methyltransferasechromosome CDS105490 786 + 0.530534
trmU PD0662 tRNA methyltransferasechromosome CDS811561 1140 - 0.547368
trpS PD1650 tryptophanyl-tRNA synthetasechromosome CDS1910085 1308 - 0.543578
truA PD0610 pseudouridylate synthasechromosome CDS749259 777 + 0.566281
truB PD0196 tRNA pseudouridine synthase Bchromosome CDS247597 909 + 0.517052
tsf PD1959 elongation factor Tschromosome CDS2301384 879 - 0.498294
tuf PD2009 elongation factor Tuchromosome CDS2368611 1191 - 0.498741
tuf PD1996 elongation factor Tuchromosome CDS2351224 1191 - 0.498741
tyrS PD0132 tyrosyl-tRNA synthetasechromosome CDS169277 1257 + 0.464598
valS PD0102 valyl-tRNA synthetasechromosome CDS130675 2985 - 0.58727
ychF PD2013 GTP-binding proteinchromosome CDS2370346 1092 - 0.490842
yciL PD1471 pseudouridylate synthasechromosome CDS1714445 1431 + 0.552061
yfcB PD0606 adenine-specific methylasechromosome CDS743507 939 + 0.547391
yibK PD0830 tRNA/rRNA methylasechromosome CDS1029227 462 - 0.549784
yjfH PD0821 tRNA/rRNA methyltransferasechromosome CDS1012288 750 + 0.545333