Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Xanthomonas axonopodis pv. citri str. 306, 306
Number of genes found: 183
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Xanthomonas axonopodis pv. citri str. 306, 306 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
XAC0230 | tRNA/rRNA methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 279073 | 477 | - | 0.637317 | |
XAC0244 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 292046 | 735 | + | 0.647619 | |
XAC0246 | peptidyl-tRNA hydrolase | SubName: Full=Peptidyl-tRNA hydrolase; | chromosome | CDS | 293853 | 432 | + | 0.680556 | |
XAC0277 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 331068 | 1233 | - | 0.652879 | |
XAC0290 | pseudouridylate synthase | RecName: Full=Ribosomal large subunit pseudouridine synthase E; EC=5.4.99.20; AltName: Full=rRNA pseudouridylate synthase E; AltName: Full=rRNA-uridine isomerase E; | chromosome | CDS | 344222 | 579 | + | 0.675302 | |
XAC0323 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 384688 | 411 | + | 0.673966 | |
XAC0816 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-; | chromosome | CDS | 973973 | 999 | - | 0.674675 | |
XAC0890 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1052002 | 561 | - | 0.672014 | |
XAC1014 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1170385 | 795 | + | 0.691824 | |
XAC1329 | RNA methyltransferase | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 1534335 | 1356 | + | 0.649705 | |
XAC1342 | mRNA 3'-end processing factor | SubName: Full=mRNA 3-end processing factor; | chromosome | CDS | 1549288 | 1023 | - | 0.670577 | |
XAC1365 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1573286 | 603 | + | 0.661692 | |
XAC1371 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1580071 | 348 | + | 0.658046 | |
XAC1553 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1793415 | 735 | + | 0.647619 | |
XAC1569 | tRNA/rRNA methyltransferase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 1812938 | 750 | + | 0.684 | |
XAC1630 | initiation factor eIF-2B | RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; | chromosome | CDS | 1877576 | 1065 | + | 0.692958 | |
XAC1730 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1989253 | 306 | - | 0.627451 | |
XAC2038 | conserved hypothetical protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 2382670 | 510 | + | 0.67451 | |
XAC2232 | repressor binding protein | SubName: Full=Repressor binding protein; | chromosome | CDS | 2615050 | 1083 | - | 0.606648 | |
XAC2318 | pseudouridylate synthase | RecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; | chromosome | CDS | 2711970 | 1653 | + | 0.702359 | |
XAC2384 | tRNA/rRNA methyltransferase | SubName: Full=tRNA/rRNA methyltransferase; | chromosome | CDS | 2778692 | 765 | - | 0.679739 | |
XAC2400 | aminoacyl-tRNA synthetase:glutamyl homolog | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 2796385 | 900 | + | 0.703333 | |
XAC2445 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2846777 | 234 | + | 0.653846 | |
XAC2461 | conserved hypothetical protein | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 2865087 | 1359 | + | 0.630611 | |
XAC2735 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 3198750 | 1374 | - | 0.631004 | |
XAC2811 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3296455 | 723 | - | 0.625173 | |
XAC2955 | nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 3460286 | 711 | + | 0.637131 | |
XAC2973 | sigma-54 modulation protein | SubName: Full=Sigma-54 modulation protein; | chromosome | CDS | 3475763 | 318 | + | 0.628931 | |
XAC3012 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3522485 | 255 | + | 0.65098 | |
XAC3129 | pseudouridylate synthase | SubName: Full=Pseudouridylate synthase; | chromosome | CDS | 3681447 | 711 | - | 0.661041 | |
XAC3316 | tRNA/rRNA methyltransferase | SubName: Full=tRNA/rRNA methyltransferase; | chromosome | CDS | 3901881 | 918 | - | 0.696078 | |
XAC3317 | acetyltransferase | SubName: Full=Acetyltransferase; | chromosome | CDS | 3903089 | 636 | - | 0.669811 | |
XAC3762 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4440028 | 399 | + | 0.679198 | |
XAC3789 | conserved hypothetical protein | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 4458158 | 441 | - | 0.662132 | |
XAC3808 | conserved hypothetical protein | RecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; | chromosome | CDS | 4480281 | 564 | + | 0.73227 | |
XAC3858 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4541477 | 198 | - | 0.636364 | |
XAC3925 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4616718 | 570 | - | 0.626316 | |
XAC4025 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase A; EC=1.-.-.-; | chromosome | CDS | 4716300 | 1005 | - | 0.673632 | |
XAC4205 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4953153 | 837 | + | 0.508961 | |
XAC4280 | acetyltransferase | SubName: Full=Acetyltransferase; | chromosome | CDS | 5056018 | 555 | - | 0.648649 | |
XAC4309 | phosphotransferase | chromosome | CDS | 5096043 | 180 | + | 0.694444 | ||
XAC4320 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 5104812 | 897 | - | 0.664437 | |
alaS | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 2001827 | 2649 | + | 0.641752 | |
argA | amino-acid acetyltransferase | SubName: Full=Amino-acid acetyltransferase; | chromosome | CDS | 2742485 | 597 | - | 0.658291 | |
argS | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 4601625 | 1710 | + | 0.654386 | |
asnS | asparaginyl-tRNA synthetase | RecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; | chromosome | CDS | 1863022 | 1395 | - | 0.632975 | |
aspG | asparaginase | SubName: Full=Asparaginase; | chromosome | CDS | 1096146 | 486 | - | 0.588477 | |
aspS | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; | chromosome | CDS | 3704027 | 1767 | - | 0.658744 | |
cca | tRNA nucleotidyltransferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 854150 | 1233 | - | 0.663423 | |
codA | cytosine deaminase | SubName: Full=Cytosine deaminase; | chromosome | CDS | 754077 | 456 | - | 0.640351 | |
cysS | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 2749400 | 1431 | + | 0.651293 | |
dbpA | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 2784754 | 1377 | + | 0.670298 | |
deaD | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3299957 | 1899 | - | 0.678778 | |
def | peptide deformylase | RecName: Full=Peptide deformylase 1; Short=PDF 1; EC=3.5.1.88; AltName: Full=Polypeptide deformylase 1; | chromosome | CDS | 4148183 | 516 | - | 0.624031 | |
def | polypeptide deformylase | RecName: Full=Peptide deformylase 2; Short=PDF 2; EC=3.5.1.88; AltName: Full=Polypeptide deformylase 2; | chromosome | CDS | 4472009 | 513 | - | 0.615984 | |
efP | elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 2773669 | 567 | - | 0.626102 | |
fmt | 10-Formyltetrahydrofolate:L-methionyl-tRNAN-form yltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4470685 | 924 | - | 0.711039 | |
frr | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 1633139 | 558 | - | 0.620072 | |
ftsJ | cell division protein | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 1989624 | 633 | + | 0.635071 | |
fusA | elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 1131295 | 2118 | + | 0.615675 | |
gatA | Glu-tRNAGln amidotransferase A subunit | SubName: Full=Glu-tRNAGln amidotransferase A subunit; | chromosome | CDS | 364456 | 1413 | - | 0.717622 | |
gatAX | Glu-tRNAGln amidotransferase A subunit | SubName: Full=Glu-tRNAGln amidotransferase A subunit; | chromosome | CDS | 1155975 | 1530 | - | 0.684967 | |
glnS | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 1054921 | 1740 | - | 0.647701 | |
gluS | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 3338819 | 1404 | - | 0.644587 | |
glyQ | glycyl-tRNA synthetase alpha chain | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; | chromosome | CDS | 4961621 | 909 | - | 0.643564 | |
glyS | glycyl-tRNA synthetase beta chain | SubName: Full=Glycyl-tRNA synthetase beta chain; | chromosome | CDS | 4959182 | 2238 | - | 0.661305 | |
gshB | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; | chromosome | CDS | 3646078 | 951 | + | 0.679285 | |
hemK | protoporphyrinogen oxidase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 1069474 | 861 | + | 0.696864 | |
hisS | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 2121571 | 1437 | + | 0.663187 | |
hslR | heat shock protein 15 homolog | SubName: Full=Heat shock protein 15 homolog; | chromosome | CDS | 1487774 | 408 | + | 0.671569 | |
ileS | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 1430692 | 2832 | + | 0.661017 | |
infA | initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 2338149 | 219 | - | 0.547945 | |
infB | protein chain initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 3145197 | 2715 | - | 0.65267 | |
infC | initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 3053268 | 480 | - | 0.604167 | |
ksgA | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 1024298 | 789 | - | 0.652725 | |
leuS | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 3259948 | 2643 | - | 0.653424 | |
lysS | lysyl-tRNA synthetase | SubName: Full=Lysyl-tRNA synthetase; | chromosome | CDS | 1875628 | 963 | + | 0.646937 | |
lysU | lysyl-tRNA synthetase heat inducible | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 2176503 | 1518 | + | 0.650198 | |
map | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 1644875 | 777 | + | 0.621622 | |
map | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 4452924 | 771 | - | 0.61738 | |
miaA | tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 1993285 | 984 | + | 0.693089 | |
pcnB | polynucleotide adenyltransferase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 2052441 | 1368 | + | 0.642544 | |
pheS | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 3051208 | 996 | - | 0.646586 | |
pnp | polynucleotide phosphorylase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 3140958 | 2115 | - | 0.630733 | |
prfA | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 1106178 | 1086 | - | 0.653775 | |
prfB | peptide chain release factor 2 | SubName: Full=Peptide chain release factor 2; | chromosome | CDS | 2175309 | 990 | + | 0.638384 | |
prfC | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 3559192 | 1605 | + | 0.626791 | |
prmA | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 616029 | 921 | - | 0.674267 | |
proS | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 4230528 | 1752 | + | 0.659247 | |
pth | peptidyl tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 1113814 | 582 | + | 0.640893 | |
queA | S-adenosylmethionine:tRNAribosyltransferase-isom erase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 2943476 | 1071 | - | 0.68254 | |
rbfA | ribosomal-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 3144664 | 393 | - | 0.64631 | |
rhlB | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 4502369 | 1716 | - | 0.680653 | |
rhlE | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 527052 | 1293 | - | 0.688322 | |
rhlE | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 4282079 | 1383 | + | 0.680405 | |
rimJ | ribosomal protein alanine acetyltransferase | SubName: Full=Ribosomal protein alanine acetyltransferase; | chromosome | CDS | 3632539 | 639 | - | 0.657277 | |
rimK | ribosomal protein S6 modification protein | RecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; | chromosome | CDS | 3832959 | 159 | - | 0.679245 | |
rimK | ribosomal protein S6 modification protein | RecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; | chromosome | CDS | 3833099 | 747 | - | 0.668005 | |
rimM | 16S rRNA processing protein RimM | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 1482120 | 513 | + | 0.608187 | |
rluC | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2468719 | 987 | + | 0.665653 | |
rluD | ribosomal large subunit pseudouridine synthase D | RecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; | chromosome | CDS | 3790576 | 996 | - | 0.699799 | |
rnD | ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 2813482 | 1092 | + | 0.674908 | |
rne | ribonuclease E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 2464653 | 3666 | - | 0.66994 | |
rng | ribonuclease G | SubName: Full=Ribonuclease G; | chromosome | CDS | 3246584 | 1503 | - | 0.651364 | |
rnpA | ribonuclease P, protein component | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 5174737 | 438 | - | 0.657534 | |
rph | ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 4004369 | 726 | + | 0.681818 | |
rplA | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 1119093 | 699 | + | 0.648069 | |
rplB | 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 1137016 | 828 | + | 0.640097 | |
rplC | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 1135441 | 651 | + | 0.628264 | |
rplD | 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 1136104 | 606 | + | 0.613861 | |
rplE | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 1140832 | 543 | + | 0.574586 | |
rplF | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 1142317 | 528 | + | 0.638258 | |
rplI | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 1866183 | 450 | + | 0.633333 | |
rplJ | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 1120335 | 534 | + | 0.634831 | |
rplK | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 1118661 | 429 | + | 0.617716 | |
rplL | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 1120923 | 366 | + | 0.598361 | |
rplM | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 576634 | 429 | + | 0.613054 | |
rplN | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 1140119 | 369 | + | 0.593496 | |
rplO | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 1144182 | 444 | + | 0.63964 | |
rplP | 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 1139225 | 414 | + | 0.615942 | |
rplQ | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 1148964 | 384 | + | 0.627604 | |
rplR | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 1142933 | 360 | + | 0.638889 | |
rplS | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 1483599 | 408 | + | 0.620098 | |
rplT | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 3052454 | 360 | - | 0.613889 | |
rplU | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 1425496 | 321 | + | 0.604361 | |
rplV | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 1138126 | 342 | + | 0.605263 | |
rplW | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 1136706 | 300 | + | 0.573333 | |
rplX | 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 1140503 | 318 | + | 0.616352 | |
rplY | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 1113127 | 636 | + | 0.619497 | |
rpmA | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 1425829 | 261 | + | 0.632184 | |
rpmB | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 4888778 | 237 | - | 0.603376 | |
rpmC | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 1139638 | 186 | + | 0.602151 | |
rpmD | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 1144016 | 162 | + | 0.604938 | |
rpmE | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31 type B; | chromosome | CDS | 3995796 | 243 | - | 0.526749 | |
rpmF | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1274156 | 195 | + | 0.641026 | |
rpmG | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 4888597 | 168 | - | 0.505952 | |
rpmH | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 5175213 | 141 | - | 0.64539 | |
rpmI | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 3052824 | 198 | - | 0.611111 | |
rpmJ | 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 2690615 | 126 | + | 0.611111 | |
rpsA | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 2687891 | 1686 | - | 0.615065 | |
rpsB | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 1637560 | 798 | - | 0.639098 | |
rpsC | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 1138485 | 735 | + | 0.612245 | |
rpsD | 30S ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 1147105 | 627 | + | 0.604466 | |
rpsE | 30S ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 1143451 | 543 | + | 0.624309 | |
rpsF | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 1865322 | 432 | + | 0.618056 | |
rpsG | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 1130690 | 468 | + | 0.587607 | |
rpsH | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 1141903 | 399 | + | 0.588972 | |
rpsI | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 577065 | 393 | + | 0.636132 | |
rpsJ | 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 1135118 | 312 | + | 0.586538 | |
rpsK | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 1146697 | 393 | + | 0.62341 | |
rpsL | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 1130303 | 375 | + | 0.624 | |
rpsM | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 1146330 | 357 | + | 0.619048 | |
rpsN | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 1141393 | 306 | + | 0.614379 | |
rpsO | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 3143241 | 261 | - | 0.586207 | |
rpsP | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 1481819 | 258 | + | 0.651163 | |
rpsQ | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 1139835 | 270 | + | 0.574074 | |
rpsR | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 1865765 | 231 | + | 0.593074 | |
rpsS | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 1137850 | 270 | + | 0.566667 | |
rpsT | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 1427500 | 270 | - | 0.625926 | |
rpsU | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 4556200 | 216 | + | 0.611111 | |
rsmC | ribosomal RNA small subunit methyltransferase C | SubName: Full=Ribosomal RNA small subunit methyltransferase C; | chromosome | CDS | 4356308 | 1068 | - | 0.684457 | |
rsuA | ribosomal small subunit pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 4355598 | 714 | - | 0.669468 | |
serS | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 1904872 | 1281 | + | 0.637002 | |
smpA | outer membrane protein | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 1750349 | 396 | - | 0.611111 | |
sun | Sun protein | RecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; | chromosome | CDS | 4469375 | 1311 | - | 0.687262 | |
tdcF | TdcF protein | SubName: Full=TdcF protein; | chromosome | CDS | 4031257 | 504 | - | 0.605159 | |
tgt | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 2942242 | 1146 | - | 0.664049 | |
thrS | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 3053859 | 1905 | - | 0.63622 | |
trmD | tRNA (guanine-N1-)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 1482696 | 759 | + | 0.671937 | |
trmU | tRNA methyltransferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 2333279 | 1137 | - | 0.670185 | |
trpS | tryptophanyl-tRNA synthetase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; | chromosome | CDS | 4698692 | 1299 | - | 0.635874 | |
truA | tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 3180487 | 774 | - | 0.661499 | |
truB | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 3143658 | 927 | - | 0.659115 | |
tsf | elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 1636512 | 879 | - | 0.638225 | |
tufA | elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 1133461 | 1191 | + | 0.632242 | |
tufB | elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 1116063 | 1191 | + | 0.634761 | |
tyrS | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 4582318 | 1212 | - | 0.633663 | |
uahA | urea amidolyase | SubName: Full=Urea amidolyase; | chromosome | CDS | 5114835 | 1800 | - | 0.671667 | |
valS | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 4217539 | 2835 | + | 0.633862 | |
ychF | GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 1114473 | 1092 | + | 0.630952 | |
yeiP | elongation factor P | RecName: Full=Elongation factor P-like protein; | chromosome | CDS | 2145715 | 567 | - | 0.619048 | |
yfcB | adenine-specific methylase | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 3187621 | 927 | - | 0.653722 | |
yjgF | translation initiation inhibitor | SubName: Full=Translation initiation inhibitor; | chromosome | CDS | 3999352 | 381 | - | 0.653543 |