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2024-04-28 16:08:42

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Xanthomonas axonopodis pv. citri str. 306, 306

Number of genes found: 183

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Xanthomonas axonopodis pv. citri str. 306, 306
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XAC0230 tRNA/rRNA methyltransferasechromosome CDS279073 477 - 0.637317
XAC0244 pseudouridylate synthasechromosome CDS292046 735 + 0.647619
XAC0246 peptidyl-tRNA hydrolasechromosome CDS293853 432 + 0.680556
XAC0277 conserved hypothetical proteinchromosome CDS331068 1233 - 0.652879
XAC0290 pseudouridylate synthasechromosome CDS344222 579 + 0.675302
XAC0323 conserved hypothetical proteinchromosome CDS384688 411 + 0.673966
XAC0816 conserved hypothetical proteinchromosome CDS973973 999 - 0.674675
XAC0890 conserved hypothetical proteinchromosome CDS1052002 561 - 0.672014
XAC1014 pseudouridylate synthasechromosome CDS1170385 795 + 0.691824
XAC1329 RNA methyltransferasechromosome CDS1534335 1356 + 0.649705
XAC1342 mRNA 3'-end processing factorchromosome CDS1549288 1023 - 0.670577
XAC1365 conserved hypothetical proteinchromosome CDS1573286 603 + 0.661692
XAC1371 conserved hypothetical proteinchromosome CDS1580071 348 + 0.658046
XAC1553 conserved hypothetical proteinchromosome CDS1793415 735 + 0.647619
XAC1569 tRNA/rRNA methyltransferasechromosome CDS1812938 750 + 0.684
XAC1630 initiation factor eIF-2Bchromosome CDS1877576 1065 + 0.692958
XAC1730 conserved hypothetical proteinchromosome CDS1989253 306 - 0.627451
XAC2038 conserved hypothetical proteinchromosome CDS2382670 510 + 0.67451
XAC2232 repressor binding proteinchromosome CDS2615050 1083 - 0.606648
XAC2318 pseudouridylate synthasechromosome CDS2711970 1653 + 0.702359
XAC2384 tRNA/rRNA methyltransferasechromosome CDS2778692 765 - 0.679739
XAC2400 aminoacyl-tRNA synthetase:glutamyl homologchromosome CDS2796385 900 + 0.703333
XAC2445 conserved hypothetical proteinchromosome CDS2846777 234 + 0.653846
XAC2461 conserved hypothetical proteinchromosome CDS2865087 1359 + 0.630611
XAC2735 conserved hypothetical proteinchromosome CDS3198750 1374 - 0.631004
XAC2811 pseudouridylate synthasechromosome CDS3296455 723 - 0.625173
XAC2955 nucleotidyl transferasechromosome CDS3460286 711 + 0.637131
XAC2973 sigma-54 modulation proteinchromosome CDS3475763 318 + 0.628931
XAC3012 conserved hypothetical proteinchromosome CDS3522485 255 + 0.65098
XAC3129 pseudouridylate synthasechromosome CDS3681447 711 - 0.661041
XAC3316 tRNA/rRNA methyltransferasechromosome CDS3901881 918 - 0.696078
XAC3317 acetyltransferasechromosome CDS3903089 636 - 0.669811
XAC3762 conserved hypothetical proteinchromosome CDS4440028 399 + 0.679198
XAC3789 conserved hypothetical proteinchromosome CDS4458158 441 - 0.662132
XAC3808 conserved hypothetical proteinchromosome CDS4480281 564 + 0.73227
XAC3858 conserved hypothetical proteinchromosome CDS4541477 198 - 0.636364
XAC3925 conserved hypothetical proteinchromosome CDS4616718 570 - 0.626316
XAC4025 conserved hypothetical proteinchromosome CDS4716300 1005 - 0.673632
XAC4205 conserved hypothetical proteinchromosome CDS4953153 837 + 0.508961
XAC4280 acetyltransferasechromosome CDS5056018 555 - 0.648649
XAC4309 phosphotransferasechromosome CDS5096043 180 + 0.694444
XAC4320 pseudouridylate synthasechromosome CDS5104812 897 - 0.664437
alaS alanyl-tRNA synthetasechromosome CDS2001827 2649 + 0.641752
argA amino-acid acetyltransferasechromosome CDS2742485 597 - 0.658291
argS arginyl-tRNA synthetasechromosome CDS4601625 1710 + 0.654386
asnS asparaginyl-tRNA synthetasechromosome CDS1863022 1395 - 0.632975
aspG asparaginasechromosome CDS1096146 486 - 0.588477
aspS aspartyl-tRNA synthetasechromosome CDS3704027 1767 - 0.658744
cca tRNA nucleotidyltransferasechromosome CDS854150 1233 - 0.663423
codA cytosine deaminasechromosome CDS754077 456 - 0.640351
cysS cysteinyl-tRNA synthetasechromosome CDS2749400 1431 + 0.651293
dbpA ATP-dependent RNA helicasechromosome CDS2784754 1377 + 0.670298
deaD ATP-dependent RNA helicasechromosome CDS3299957 1899 - 0.678778
def peptide deformylasechromosome CDS4148183 516 - 0.624031
def polypeptide deformylasechromosome CDS4472009 513 - 0.615984
efP elongation factor Pchromosome CDS2773669 567 - 0.626102
fmt 10-Formyltetrahydrofolate:L-methionyl-tRNAN-form yltransferasechromosome CDS4470685 924 - 0.711039
frr ribosome recycling factorchromosome CDS1633139 558 - 0.620072
ftsJ cell division proteinchromosome CDS1989624 633 + 0.635071
fusA elongation factor Gchromosome CDS1131295 2118 + 0.615675
gatA Glu-tRNAGln amidotransferase A subunitchromosome CDS364456 1413 - 0.717622
gatAX Glu-tRNAGln amidotransferase A subunitchromosome CDS1155975 1530 - 0.684967
glnS glutaminyl-tRNA synthetasechromosome CDS1054921 1740 - 0.647701
gluS glutamyl-tRNA synthetasechromosome CDS3338819 1404 - 0.644587
glyQ glycyl-tRNA synthetase alpha chainchromosome CDS4961621 909 - 0.643564
glyS glycyl-tRNA synthetase beta chainchromosome CDS4959182 2238 - 0.661305
gshB glutathione synthetasechromosome CDS3646078 951 + 0.679285
hemK protoporphyrinogen oxidasechromosome CDS1069474 861 + 0.696864
hisS histidyl-tRNA synthetasechromosome CDS2121571 1437 + 0.663187
hslR heat shock protein 15 homologchromosome CDS1487774 408 + 0.671569
ileS isoleucyl-tRNA synthetasechromosome CDS1430692 2832 + 0.661017
infA initiation factor IF-1chromosome CDS2338149 219 - 0.547945
infB protein chain initiation factor IF-2chromosome CDS3145197 2715 - 0.65267
infC initiation factor IF-3chromosome CDS3053268 480 - 0.604167
ksgA dimethyladenosine transferasechromosome CDS1024298 789 - 0.652725
leuS leucyl-tRNA synthetasechromosome CDS3259948 2643 - 0.653424
lysS lysyl-tRNA synthetasechromosome CDS1875628 963 + 0.646937
lysU lysyl-tRNA synthetase heat induciblechromosome CDS2176503 1518 + 0.650198
map methionine aminopeptidasechromosome CDS1644875 777 + 0.621622
map methionine aminopeptidasechromosome CDS4452924 771 - 0.61738
miaA tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1993285 984 + 0.693089
pcnB polynucleotide adenyltransferasechromosome CDS2052441 1368 + 0.642544
pheS phenylalanyl-tRNA synthetase alpha chainchromosome CDS3051208 996 - 0.646586
pnp polynucleotide phosphorylasechromosome CDS3140958 2115 - 0.630733
prfA peptide chain release factor 1chromosome CDS1106178 1086 - 0.653775
prfB peptide chain release factor 2chromosome CDS2175309 990 + 0.638384
prfC peptide chain release factor 3chromosome CDS3559192 1605 + 0.626791
prmA ribosomal protein L11 methyltransferasechromosome CDS616029 921 - 0.674267
proS prolyl-tRNA synthetasechromosome CDS4230528 1752 + 0.659247
pth peptidyl tRNA hydrolasechromosome CDS1113814 582 + 0.640893
queA S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS2943476 1071 - 0.68254
rbfA ribosomal-binding factor Achromosome CDS3144664 393 - 0.64631
rhlB ATP-dependent RNA helicasechromosome CDS4502369 1716 - 0.680653
rhlE ATP-dependent RNA helicasechromosome CDS4282079 1383 + 0.680405
rhlE ATP-dependent RNA helicasechromosome CDS527052 1293 - 0.688322
rimJ ribosomal protein alanine acetyltransferasechromosome CDS3632539 639 - 0.657277
rimK ribosomal protein S6 modification proteinchromosome CDS3832959 159 - 0.679245
rimK ribosomal protein S6 modification proteinchromosome CDS3833099 747 - 0.668005
rimM 16S rRNA processing protein RimMchromosome CDS1482120 513 + 0.608187
rluC pseudouridylate synthasechromosome CDS2468719 987 + 0.665653
rluD ribosomal large subunit pseudouridine synthase Dchromosome CDS3790576 996 - 0.699799
rnD ribonuclease Dchromosome CDS2813482 1092 + 0.674908
rne ribonuclease Echromosome CDS2464653 3666 - 0.66994
rng ribonuclease Gchromosome CDS3246584 1503 - 0.651364
rnpA ribonuclease P, protein componentchromosome CDS5174737 438 - 0.657534
rph ribonuclease PHchromosome CDS4004369 726 + 0.681818
rplA 50S ribosomal protein L1chromosome CDS1119093 699 + 0.648069
rplB 50S ribosomal protein L2chromosome CDS1137016 828 + 0.640097
rplC 50S ribosomal protein L3chromosome CDS1135441 651 + 0.628264
rplD 50S ribosomal protein L4chromosome CDS1136104 606 + 0.613861
rplE 50S ribosomal protein L5chromosome CDS1140832 543 + 0.574586
rplF 50S ribosomal protein L6chromosome CDS1142317 528 + 0.638258
rplI 50S ribosomal protein L9chromosome CDS1866183 450 + 0.633333
rplJ 50S ribosomal protein L10chromosome CDS1120335 534 + 0.634831
rplK 50S ribosomal protein L11chromosome CDS1118661 429 + 0.617716
rplL 50S ribosomal protein L7/L12chromosome CDS1120923 366 + 0.598361
rplM 50S ribosomal protein L13chromosome CDS576634 429 + 0.613054
rplN 50S ribosomal protein L14chromosome CDS1140119 369 + 0.593496
rplO 50S ribosomal protein L15chromosome CDS1144182 444 + 0.63964
rplP 50S ribosomal protein L16chromosome CDS1139225 414 + 0.615942
rplQ 50S ribosomal protein L17chromosome CDS1148964 384 + 0.627604
rplR 50S ribosomal protein L18chromosome CDS1142933 360 + 0.638889
rplS 50S ribosomal protein L19chromosome CDS1483599 408 + 0.620098
rplT 50S ribosomal protein L20chromosome CDS3052454 360 - 0.613889
rplU 50S ribosomal protein L21chromosome CDS1425496 321 + 0.604361
rplV 50S ribosomal protein L22chromosome CDS1138126 342 + 0.605263
rplW 50S ribosomal protein L23chromosome CDS1136706 300 + 0.573333
rplX 50S ribosomal protein L24chromosome CDS1140503 318 + 0.616352
rplY 50S ribosomal protein L25chromosome CDS1113127 636 + 0.619497
rpmA 50S ribosomal protein L27chromosome CDS1425829 261 + 0.632184
rpmB 50S ribosomal protein L28chromosome CDS4888778 237 - 0.603376
rpmC 50S ribosomal protein L29chromosome CDS1139638 186 + 0.602151
rpmD 50S ribosomal protein L30chromosome CDS1144016 162 + 0.604938
rpmE 50S ribosomal protein L31chromosome CDS3995796 243 - 0.526749
rpmF 50S ribosomal protein L32chromosome CDS1274156 195 + 0.641026
rpmG 50S ribosomal protein L33chromosome CDS4888597 168 - 0.505952
rpmH 50S ribosomal protein L34chromosome CDS5175213 141 - 0.64539
rpmI 50S ribosomal protein L35chromosome CDS3052824 198 - 0.611111
rpmJ 50S ribosomal protein L36chromosome CDS2690615 126 + 0.611111
rpsA 30S ribosomal protein S1chromosome CDS2687891 1686 - 0.615065
rpsB 30S ribosomal protein S2chromosome CDS1637560 798 - 0.639098
rpsC 30S ribosomal protein S3chromosome CDS1138485 735 + 0.612245
rpsD 30S ribosomal protein S4chromosome CDS1147105 627 + 0.604466
rpsE 30S ribosomal protein S5chromosome CDS1143451 543 + 0.624309
rpsF 30S ribosomal protein S6chromosome CDS1865322 432 + 0.618056
rpsG 30S ribosomal protein S7chromosome CDS1130690 468 + 0.587607
rpsH 30S ribosomal protein S8chromosome CDS1141903 399 + 0.588972
rpsI 30S ribosomal protein S9chromosome CDS577065 393 + 0.636132
rpsJ 30S ribosomal protein S10chromosome CDS1135118 312 + 0.586538
rpsK 30S ribosomal protein S11chromosome CDS1146697 393 + 0.62341
rpsL 30S ribosomal protein S12chromosome CDS1130303 375 + 0.624
rpsM 30S ribosomal protein S13chromosome CDS1146330 357 + 0.619048
rpsN 30S ribosomal protein S14chromosome CDS1141393 306 + 0.614379
rpsO 30S ribosomal protein S15chromosome CDS3143241 261 - 0.586207
rpsP 30S ribosomal protein S16chromosome CDS1481819 258 + 0.651163
rpsQ 30S ribosomal protein S17chromosome CDS1139835 270 + 0.574074
rpsR 30S ribosomal protein S18chromosome CDS1865765 231 + 0.593074
rpsS 30S ribosomal protein S19chromosome CDS1137850 270 + 0.566667
rpsT 30S ribosomal protein S20chromosome CDS1427500 270 - 0.625926
rpsU 30S ribosomal protein S21chromosome CDS4556200 216 + 0.611111
rsmC ribosomal RNA small subunit methyltransferase Cchromosome CDS4356308 1068 - 0.684457
rsuA ribosomal small subunit pseudouridylate synthasechromosome CDS4355598 714 - 0.669468
serS seryl-tRNA synthetasechromosome CDS1904872 1281 + 0.637002
smpA outer membrane proteinchromosome CDS1750349 396 - 0.611111
sun Sun proteinchromosome CDS4469375 1311 - 0.687262
tdcF TdcF proteinchromosome CDS4031257 504 - 0.605159
tgt queuine tRNA-ribosyltransferasechromosome CDS2942242 1146 - 0.664049
thrS threonyl-tRNA synthetasechromosome CDS3053859 1905 - 0.63622
trmD tRNA (guanine-N1-)-methyltransferasechromosome CDS1482696 759 + 0.671937
trmU tRNA methyltransferasechromosome CDS2333279 1137 - 0.670185
trpS tryptophanyl-tRNA synthetasechromosome CDS4698692 1299 - 0.635874
truA tRNA pseudouridine synthase Achromosome CDS3180487 774 - 0.661499
truB tRNA pseudouridine synthase Bchromosome CDS3143658 927 - 0.659115
tsf elongation factor Tschromosome CDS1636512 879 - 0.638225
tufA elongation factor Tuchromosome CDS1133461 1191 + 0.632242
tufB elongation factor Tuchromosome CDS1116063 1191 + 0.634761
tyrS tyrosyl-tRNA synthetasechromosome CDS4582318 1212 - 0.633663
uahA urea amidolyasechromosome CDS5114835 1800 - 0.671667
valS valyl-tRNA synthetasechromosome CDS4217539 2835 + 0.633862
ychF GTP-binding proteinchromosome CDS1114473 1092 + 0.630952
yeiP elongation factor Pchromosome CDS2145715 567 - 0.619048
yfcB adenine-specific methylasechromosome CDS3187621 927 - 0.653722
yjgF translation initiation inhibitorchromosome CDS3999352 381 - 0.653543