Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
Number of genes found: 178
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Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
XCC0209 | tRNA/rRNA methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 265555 | 477 | - | 0.641509 | |
XCC0225 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 282790 | 738 | + | 0.659892 | |
XCC0227 | peptidyl-tRNA hydrolase | SubName: Full=Peptidyl-tRNA hydrolase; | chromosome | CDS | 284990 | 432 | + | 0.675926 | |
XCC0273 | pseudouridylate synthase | RecName: Full=Ribosomal large subunit pseudouridine synthase E; EC=5.4.99.20; AltName: Full=rRNA pseudouridylate synthase E; AltName: Full=rRNA-uridine isomerase E; | chromosome | CDS | 335774 | 564 | + | 0.691489 | |
XCC0309 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 379229 | 393 | + | 0.669211 | |
XCC0476 | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 576882 | 429 | + | 0.608392 | |
XCC0516 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 622586 | 387 | - | 0.612403 | |
XCC0763 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-; | chromosome | CDS | 919670 | 999 | - | 0.673674 | |
XCC0817 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 975611 | 561 | - | 0.672014 | |
XCC0917 | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 1067158 | 393 | + | 0.608142 | |
XCC0937 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1090174 | 858 | + | 0.70979 | |
XCC1277 | RNA methyltransferase | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 1493907 | 1335 | + | 0.644195 | |
XCC1291 | putative mRNA 3'-end processing factor | SubName: Full=Putative mRNA 3-end processing factor; | chromosome | CDS | 1509728 | 1011 | - | 0.680514 | |
XCC1319 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1537577 | 603 | + | 0.661692 | |
XCC1325 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1544213 | 348 | + | 0.632184 | |
XCC1519 | tRNA/rRNA methyltransferase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 1778257 | 750 | + | 0.690667 | |
XCC1573 | initiation factor eIF-2B | RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; | chromosome | CDS | 1836694 | 1065 | + | 0.694836 | |
XCC1711 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1986254 | 306 | - | 0.633987 | |
XCC1895 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2219477 | 378 | - | 0.608466 | |
XCC1902 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2226045 | 1002 | + | 0.542914 | |
XCC2015 | glucose-1-phosphate cytidylyltransferase | SubName: Full=Glucose-1-phosphate cytidylyltransferase; | chromosome | CDS | 2364249 | 774 | - | 0.635659 | |
XCC2169 | conserved hypothetical protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 2557551 | 516 | - | 0.680233 | |
XCC2214 | pseudouridylate synthase | RecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; | chromosome | CDS | 2610473 | 1479 | + | 0.696416 | |
XCC2276 | tRNA/rRNA methyltransferase | SubName: Full=tRNA/rRNA methyltransferase; | chromosome | CDS | 2677643 | 777 | - | 0.689833 | |
XCC2293 | aminoacyl-tRNA synthetase: glutamyl homolog | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 2695445 | 894 | + | 0.706935 | |
XCC2328 | conserved hypothetical protein | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 2735233 | 1458 | + | 0.641975 | |
XCC2564 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 3040457 | 1374 | - | 0.654294 | |
XCC2640 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3129747 | 723 | - | 0.644537 | |
XCC2803 | sigma-54 modulation protein | SubName: Full=Sigma-54 modulation protein; | chromosome | CDS | 3309395 | 318 | + | 0.628931 | |
XCC2843 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3355331 | 252 | + | 0.670635 | |
XCC2951 | pseudouridylate synthase | SubName: Full=Pseudouridylate synthase; | chromosome | CDS | 3511935 | 711 | - | 0.666667 | |
XCC3165 | tRNA/rRNA methyltransferase | SubName: Full=tRNA/rRNA methyltransferase; | chromosome | CDS | 3753287 | 903 | - | 0.716501 | |
XCC3167 | acetyltransferase | SubName: Full=Acetyltransferase; | chromosome | CDS | 3755780 | 579 | - | 0.680484 | |
XCC3720 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4429097 | 405 | + | 0.674074 | |
XCC3737 | conserved hypothetical protein | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 4443997 | 450 | - | 0.666667 | |
XCC3756 | conserved hypothetical protein | RecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; | chromosome | CDS | 4465448 | 564 | + | 0.718085 | |
XCC3776 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 4487426 | 1722 | - | 0.692799 | |
XCC3945 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase A; EC=1.-.-.-; | chromosome | CDS | 4673448 | 1008 | - | 0.69246 | |
XCC4138 | acetyltransferase | SubName: Full=Acetyltransferase; | chromosome | CDS | 4931396 | 558 | - | 0.673835 | |
XCC4189 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 4995846 | 897 | - | 0.649944 | |
alaS | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 2001814 | 2649 | + | 0.639487 | |
argA | amino-acid acetyltransferase | SubName: Full=Amino-acid acetyltransferase; | chromosome | CDS | 2642105 | 612 | - | 0.674837 | |
argS | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 4583153 | 1689 | + | 0.656009 | |
asnS | asparaginyl-tRNA synthetase | RecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; | chromosome | CDS | 1821398 | 1395 | - | 0.645161 | |
aspG | asparaginase | SubName: Full=Asparaginase; | chromosome | CDS | 1016303 | 486 | - | 0.623457 | |
aspS | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; | chromosome | CDS | 3576045 | 1767 | - | 0.661007 | |
cca | tRNA nucleotidyltransferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 4056635 | 1233 | + | 0.682887 | |
codA | cytosine deaminase | SubName: Full=Cytosine deaminase; | chromosome | CDS | 4158836 | 456 | + | 0.633772 | |
cysS | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 2649142 | 1374 | + | 0.676856 | |
dbpA | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 2683748 | 1377 | + | 0.672476 | |
deaD | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3133068 | 1929 | - | 0.687403 | |
def | peptide deformylase | RecName: Full=Peptide deformylase 1; Short=PDF 1; EC=3.5.1.88; AltName: Full=Polypeptide deformylase 1; | chromosome | CDS | 829445 | 516 | + | 0.635659 | |
def | polypeptide deformylase | RecName: Full=Peptide deformylase 2; Short=PDF 2; EC=3.5.1.88; AltName: Full=Polypeptide deformylase 2; | chromosome | CDS | 4457304 | 513 | - | 0.631579 | |
efP | elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 2672588 | 567 | - | 0.624339 | |
fmt | 10-Formyltetrahydrofolate:L-methionyl-tRNAN-form yltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4455985 | 924 | - | 0.695887 | |
frr | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 1594647 | 558 | - | 0.623656 | |
ftsJ | cell division protein | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 1986619 | 639 | + | 0.630673 | |
fusA | elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 1051768 | 2118 | + | 0.618036 | |
gatA | Glu-tRNAGln amidotransferase A subunit | SubName: Full=Glu-tRNAGln amidotransferase A subunit; | chromosome | CDS | 357320 | 1461 | - | 0.710472 | |
gatAX | Glu-tRNAGln amidotransferase A subunit | SubName: Full=Glu-tRNAGln amidotransferase A subunit; | chromosome | CDS | 1073880 | 1518 | - | 0.692358 | |
glgC | nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 3294577 | 711 | + | 0.658228 | |
glnS | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 978905 | 1740 | - | 0.661494 | |
gluS | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 3183612 | 1404 | - | 0.657407 | |
glyQ | glycyl-tRNA synthetase alpha chain | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; | chromosome | CDS | 4859122 | 909 | - | 0.643564 | |
glyS | glycyl-tRNA synthetase beta chain | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 4856732 | 2097 | - | 0.660467 | |
gshB | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; | chromosome | CDS | 3476601 | 951 | + | 0.683491 | |
hemK | protoporphyrinogen oxidase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 992975 | 852 | + | 0.712441 | |
hisS | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 2106716 | 1434 | + | 0.663877 | |
hslR | heat shock protein 15 homolog | RecName: Full=Heat shock protein 15; | chromosome | CDS | 1405638 | 408 | + | 0.669118 | |
ileS | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 1343215 | 2832 | + | 0.66596 | |
infA | initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 2306541 | 219 | - | 0.547945 | |
infB | protein chain initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 2983000 | 2751 | - | 0.647037 | |
infC | initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 2923388 | 480 | - | 0.597917 | |
ksgA | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 948781 | 789 | - | 0.657795 | |
leuS | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 3106357 | 2514 | - | 0.652347 | |
leuS | leucyl-tRNA synthetase | SubName: Full=Leucyl-tRNA synthetase; | chromosome | CDS | 3106167 | 279 | - | 0.663082 | |
lysS | lysyl-tRNA synthetase | SubName: Full=Lysyl-tRNA synthetase; | chromosome | CDS | 1834874 | 975 | + | 0.658462 | |
lysU | putative lysyl tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 2156683 | 1518 | + | 0.658103 | |
map | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 1606327 | 777 | + | 0.630631 | |
miaA | tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 1990474 | 984 | + | 0.698171 | |
pcnB | polynucleotide adenyltransferase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 2052382 | 1368 | + | 0.671053 | |
pheS | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 2921270 | 1011 | - | 0.64095 | |
pnp | polynucleotide phosphorylase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 2978781 | 2115 | - | 0.630733 | |
prfA | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 1026700 | 1086 | - | 0.660221 | |
prfB | putative peptide release factor 2 | SubName: Full=Putative peptide release factor 2; | chromosome | CDS | 2155527 | 942 | + | 0.641189 | |
prfC | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 3380918 | 1605 | + | 0.639875 | |
prmA | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 617853 | 921 | - | 0.684039 | |
proS | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 763884 | 1695 | - | 0.659587 | |
pth | peptidyl tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 1034350 | 582 | + | 0.646048 | |
queA | S-adenosylmethionine: tRNA ribosyltransferase-isomerase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 2812186 | 1071 | - | 0.687208 | |
rbfA | ribosomal-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 2982492 | 399 | - | 0.661654 | |
repA | phage-related protein | SubName: Full=Phage-related protein; | chromosome | CDS | 1703794 | 3564 | + | 0.648429 | |
rhlE | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 517880 | 1293 | - | 0.694509 | |
rhlE | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 710483 | 1389 | - | 0.688985 | |
rimJ | ribosomal protein alanine acetyltransferase | SubName: Full=Ribosomal protein alanine acetyltransferase; | chromosome | CDS | 3463296 | 573 | - | 0.663176 | |
rimK | ribosomal protein S6 modification protein | RecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; | chromosome | CDS | 3682004 | 876 | - | 0.679224 | |
rimM | 16S rRNA processing protein RimM | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 1400627 | 513 | + | 0.621832 | |
rluC | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2453255 | 984 | - | 0.671748 | |
rluD | ribosomal large subunit pseudouridine synthase D | RecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; | chromosome | CDS | 3659739 | 996 | - | 0.701807 | |
rnD | ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 2711524 | 1089 | + | 0.666667 | |
rne | ribonuclease E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 2454642 | 3564 | + | 0.677048 | |
rng | ribonuclease G | SubName: Full=Ribonuclease G; | chromosome | CDS | 3095984 | 1500 | - | 0.653333 | |
rnpA | ribonuclease P protein component | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 5075361 | 447 | - | 0.693512 | |
rph | ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 3863560 | 726 | + | 0.676309 | |
rplA | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 1039628 | 699 | + | 0.645207 | |
rplB | 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 1057478 | 828 | + | 0.644928 | |
rplC | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 1055903 | 651 | + | 0.620584 | |
rplD | 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 1056566 | 606 | + | 0.612211 | |
rplE | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 1061294 | 543 | + | 0.569061 | |
rplF | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 1062780 | 528 | + | 0.628788 | |
rplI | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 1824637 | 450 | + | 0.64 | |
rplJ | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 1040875 | 534 | + | 0.61985 | |
rplK | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 1039196 | 429 | + | 0.624709 | |
rplL | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 1041463 | 366 | + | 0.617486 | |
rplN | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 1060581 | 369 | + | 0.609756 | |
rplO | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 1064640 | 444 | + | 0.632883 | |
rplP | 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 1059687 | 414 | + | 0.615942 | |
rplQ | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 1069420 | 384 | + | 0.632812 | |
rplR | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 1063390 | 360 | + | 0.644444 | |
rplS | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 1402107 | 408 | + | 0.620098 | |
rplT | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 2922580 | 360 | - | 0.6 | |
rplU | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 1337916 | 321 | + | 0.598131 | |
rplV | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 1058588 | 342 | + | 0.590643 | |
rplW | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 1057168 | 300 | + | 0.553333 | |
rplX | 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 1060965 | 318 | + | 0.613208 | |
rplY | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 1033670 | 630 | + | 0.606349 | |
rpmA | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 1338249 | 261 | + | 0.624521 | |
rpmB | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 4783936 | 237 | - | 0.603376 | |
rpmC | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 1060100 | 186 | + | 0.612903 | |
rpmD | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 1064474 | 162 | + | 0.592593 | |
rpmE | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31 type B; | chromosome | CDS | 3845312 | 243 | - | 0.555556 | |
rpmF | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1164630 | 195 | + | 0.630769 | |
rpmG | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 4783755 | 168 | - | 0.488095 | |
rpmH | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 5075846 | 141 | - | 0.666667 | |
rpmI | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 2922950 | 198 | - | 0.616162 | |
rpmJ | 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 2589252 | 126 | + | 0.619048 | |
rpsA | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 2586535 | 1680 | - | 0.61131 | |
rpsB | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 1599127 | 828 | - | 0.637681 | |
rpsC | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 1058947 | 735 | + | 0.614966 | |
rpsD | 30S RIBOSOMAL PROTEIN S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 1067566 | 627 | + | 0.604466 | |
rpsE | 30S ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 1063909 | 543 | + | 0.639042 | |
rpsF | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 1823668 | 435 | + | 0.618391 | |
rpsG | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 1051163 | 468 | + | 0.581197 | |
rpsH | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 1062366 | 399 | + | 0.58396 | |
rpsI | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 577313 | 393 | + | 0.636132 | |
rpsJ | 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 1055580 | 312 | + | 0.602564 | |
rpsL | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 1050776 | 375 | + | 0.616 | |
rpsM | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 1066791 | 357 | + | 0.619048 | |
rpsN | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 1061855 | 306 | + | 0.601307 | |
rpsO | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 2981069 | 261 | - | 0.605364 | |
rpsP | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 1400323 | 261 | + | 0.666667 | |
rpsQ | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 1060297 | 270 | + | 0.577778 | |
rpsR | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 1824114 | 231 | + | 0.580087 | |
rpsS | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 1058312 | 270 | + | 0.562963 | |
rpsT | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 1339904 | 270 | - | 0.622222 | |
rpsU | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 4536489 | 216 | + | 0.62963 | |
rsmC | ribosomal RNA small subunit methyltransferase C | SubName: Full=Ribosomal RNA small subunit methyltransferase C; | chromosome | CDS | 4339936 | 1068 | - | 0.708802 | |
rsuA | ribosomal small subunit pseudouridylate synthase | SubName: Full=Ribosomal small subunit pseudouridylate synthase; | chromosome | CDS | 4339226 | 714 | - | 0.686275 | |
serS | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 1862425 | 1281 | + | 0.649493 | |
smpA | outer membrane protein | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 1715632 | 396 | - | 0.613636 | |
sun | Sun protein | RecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; | chromosome | CDS | 4454675 | 1314 | - | 0.700913 | |
tdcF | TdcF protein | SubName: Full=TdcF protein; | chromosome | CDS | 3889916 | 504 | - | 0.638889 | |
tgt | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 2810955 | 1146 | - | 0.678883 | |
thrS | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 2923979 | 1911 | - | 0.632653 | |
trmD | tRNA (guanine-N1-)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 1401204 | 759 | + | 0.657444 | |
trmU | tRNA methyltransferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 2301503 | 1137 | - | 0.674582 | |
trpS | tryptophanyl-tRNA synthetase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; | chromosome | CDS | 4654367 | 1296 | - | 0.64892 | |
truA | tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 3019729 | 774 | - | 0.683463 | |
truB | tRNA pseudouridine synthase B | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 2981487 | 927 | - | 0.688242 | |
tsf | elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 1598078 | 927 | - | 0.634304 | |
tufA | elongation factor Tu | RecName: Full=Elongation factor Tu-A; Short=EF-Tu-A; | chromosome | CDS | 1036595 | 1191 | + | 0.619647 | |
tufB | elongation factor Tu | RecName: Full=Elongation factor Tu-B; Short=EF-Tu-B; | chromosome | CDS | 1053934 | 1191 | + | 0.622166 | |
tyrS | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 4563621 | 1212 | - | 0.633663 | |
valS | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 771736 | 2835 | - | 0.643386 | |
ychF | GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 1035008 | 1092 | + | 0.626374 | |
yeiP | elongation factor P | RecName: Full=Elongation factor P-like protein; | chromosome | CDS | 2132752 | 567 | - | 0.62963 | |
yfcB | adenine-specific methylase | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 3027419 | 927 | - | 0.661273 | |
yjgF | translation initiation inhibitor | SubName: Full=Translation initiation inhibitor; | chromosome | CDS | 3848853 | 381 | - | 0.664042 |