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2024-05-01 05:40:13

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913

Number of genes found: 178

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Xanthomonas campestris pv. campestris str. ATCC 33913, ATCC 33913
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
XCC0209 tRNA/rRNA methyltransferasechromosome CDS265555 477 - 0.641509
XCC0225 pseudouridylate synthasechromosome CDS282790 738 + 0.659892
XCC0227 peptidyl-tRNA hydrolasechromosome CDS284990 432 + 0.675926
XCC0273 pseudouridylate synthasechromosome CDS335774 564 + 0.691489
XCC0309 conserved hypothetical proteinchromosome CDS379229 393 + 0.669211
XCC0476 50S ribosomal protein L13chromosome CDS576882 429 + 0.608392
XCC0516 conserved hypothetical proteinchromosome CDS622586 387 - 0.612403
XCC0763 conserved hypothetical proteinchromosome CDS919670 999 - 0.673674
XCC0817 conserved hypothetical proteinchromosome CDS975611 561 - 0.672014
XCC0917 30S ribosomal protein S11chromosome CDS1067158 393 + 0.608142
XCC0937 pseudouridylate synthasechromosome CDS1090174 858 + 0.70979
XCC1277 RNA methyltransferasechromosome CDS1493907 1335 + 0.644195
XCC1291 putative mRNA 3'-end processing factorchromosome CDS1509728 1011 - 0.680514
XCC1319 conserved hypothetical proteinchromosome CDS1537577 603 + 0.661692
XCC1325 conserved hypothetical proteinchromosome CDS1544213 348 + 0.632184
XCC1519 tRNA/rRNA methyltransferasechromosome CDS1778257 750 + 0.690667
XCC1573 initiation factor eIF-2Bchromosome CDS1836694 1065 + 0.694836
XCC1711 conserved hypothetical proteinchromosome CDS1986254 306 - 0.633987
XCC1895 hypothetical proteinchromosome CDS2219477 378 - 0.608466
XCC1902 conserved hypothetical proteinchromosome CDS2226045 1002 + 0.542914
XCC2015 glucose-1-phosphate cytidylyltransferasechromosome CDS2364249 774 - 0.635659
XCC2169 conserved hypothetical proteinchromosome CDS2557551 516 - 0.680233
XCC2214 pseudouridylate synthasechromosome CDS2610473 1479 + 0.696416
XCC2276 tRNA/rRNA methyltransferasechromosome CDS2677643 777 - 0.689833
XCC2293 aminoacyl-tRNA synthetase: glutamyl homologchromosome CDS2695445 894 + 0.706935
XCC2328 conserved hypothetical proteinchromosome CDS2735233 1458 + 0.641975
XCC2564 conserved hypothetical proteinchromosome CDS3040457 1374 - 0.654294
XCC2640 pseudouridylate synthasechromosome CDS3129747 723 - 0.644537
XCC2803 sigma-54 modulation proteinchromosome CDS3309395 318 + 0.628931
XCC2843 conserved hypothetical proteinchromosome CDS3355331 252 + 0.670635
XCC2951 pseudouridylate synthasechromosome CDS3511935 711 - 0.666667
XCC3165 tRNA/rRNA methyltransferasechromosome CDS3753287 903 - 0.716501
XCC3167 acetyltransferasechromosome CDS3755780 579 - 0.680484
XCC3720 conserved hypothetical proteinchromosome CDS4429097 405 + 0.674074
XCC3737 conserved hypothetical proteinchromosome CDS4443997 450 - 0.666667
XCC3756 conserved hypothetical proteinchromosome CDS4465448 564 + 0.718085
XCC3776 ATP-dependent RNA helicasechromosome CDS4487426 1722 - 0.692799
XCC3945 conserved hypothetical proteinchromosome CDS4673448 1008 - 0.69246
XCC4138 acetyltransferasechromosome CDS4931396 558 - 0.673835
XCC4189 pseudouridylate synthasechromosome CDS4995846 897 - 0.649944
alaS alanyl-tRNA synthetasechromosome CDS2001814 2649 + 0.639487
argA amino-acid acetyltransferasechromosome CDS2642105 612 - 0.674837
argS arginyl-tRNA synthetasechromosome CDS4583153 1689 + 0.656009
asnS asparaginyl-tRNA synthetasechromosome CDS1821398 1395 - 0.645161
aspG asparaginasechromosome CDS1016303 486 - 0.623457
aspS aspartyl-tRNA synthetasechromosome CDS3576045 1767 - 0.661007
cca tRNA nucleotidyltransferasechromosome CDS4056635 1233 + 0.682887
codA cytosine deaminasechromosome CDS4158836 456 + 0.633772
cysS cysteinyl-tRNA synthetasechromosome CDS2649142 1374 + 0.676856
dbpA ATP-dependent RNA helicasechromosome CDS2683748 1377 + 0.672476
deaD ATP-dependent RNA helicasechromosome CDS3133068 1929 - 0.687403
def polypeptide deformylasechromosome CDS4457304 513 - 0.631579
def peptide deformylasechromosome CDS829445 516 + 0.635659
efP elongation factor Pchromosome CDS2672588 567 - 0.624339
fmt 10-Formyltetrahydrofolate:L-methionyl-tRNAN-form yltransferasechromosome CDS4455985 924 - 0.695887
frr ribosome recycling factorchromosome CDS1594647 558 - 0.623656
ftsJ cell division proteinchromosome CDS1986619 639 + 0.630673
fusA elongation factor Gchromosome CDS1051768 2118 + 0.618036
gatA Glu-tRNAGln amidotransferase A subunitchromosome CDS357320 1461 - 0.710472
gatAX Glu-tRNAGln amidotransferase A subunitchromosome CDS1073880 1518 - 0.692358
glgC nucleotidyl transferasechromosome CDS3294577 711 + 0.658228
glnS glutaminyl-tRNA synthetasechromosome CDS978905 1740 - 0.661494
gluS glutamyl-tRNA synthetasechromosome CDS3183612 1404 - 0.657407
glyQ glycyl-tRNA synthetase alpha chainchromosome CDS4859122 909 - 0.643564
glyS glycyl-tRNA synthetase beta chainchromosome CDS4856732 2097 - 0.660467
gshB glutathione synthetasechromosome CDS3476601 951 + 0.683491
hemK protoporphyrinogen oxidasechromosome CDS992975 852 + 0.712441
hisS histidyl-tRNA synthetasechromosome CDS2106716 1434 + 0.663877
hslR heat shock protein 15 homologchromosome CDS1405638 408 + 0.669118
ileS isoleucyl-tRNA synthetasechromosome CDS1343215 2832 + 0.66596
infA initiation factor IF-1chromosome CDS2306541 219 - 0.547945
infB protein chain initiation factor IF-2chromosome CDS2983000 2751 - 0.647037
infC initiation factor IF-3chromosome CDS2923388 480 - 0.597917
ksgA dimethyladenosine transferasechromosome CDS948781 789 - 0.657795
leuS leucyl-tRNA synthetasechromosome CDS3106357 2514 - 0.652347
leuS leucyl-tRNA synthetasechromosome CDS3106167 279 - 0.663082
lysS lysyl-tRNA synthetasechromosome CDS1834874 975 + 0.658462
lysU putative lysyl tRNA synthetasechromosome CDS2156683 1518 + 0.658103
map methionine aminopeptidasechromosome CDS1606327 777 + 0.630631
miaA tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1990474 984 + 0.698171
pcnB polynucleotide adenyltransferasechromosome CDS2052382 1368 + 0.671053
pheS phenylalanyl-tRNA synthetase alpha chainchromosome CDS2921270 1011 - 0.64095
pnp polynucleotide phosphorylasechromosome CDS2978781 2115 - 0.630733
prfA peptide chain release factor 1chromosome CDS1026700 1086 - 0.660221
prfB putative peptide release factor 2chromosome CDS2155527 942 + 0.641189
prfC peptide chain release factor 3chromosome CDS3380918 1605 + 0.639875
prmA ribosomal protein L11 methyltransferasechromosome CDS617853 921 - 0.684039
proS prolyl-tRNA synthetasechromosome CDS763884 1695 - 0.659587
pth peptidyl tRNA hydrolasechromosome CDS1034350 582 + 0.646048
queA S-adenosylmethionine: tRNA ribosyltransferase-isomerasechromosome CDS2812186 1071 - 0.687208
rbfA ribosomal-binding factor Achromosome CDS2982492 399 - 0.661654
repA phage-related proteinchromosome CDS1703794 3564 + 0.648429
rhlE ATP-dependent RNA helicasechromosome CDS710483 1389 - 0.688985
rhlE ATP-dependent RNA helicasechromosome CDS517880 1293 - 0.694509
rimJ ribosomal protein alanine acetyltransferasechromosome CDS3463296 573 - 0.663176
rimK ribosomal protein S6 modification proteinchromosome CDS3682004 876 - 0.679224
rimM 16S rRNA processing protein RimMchromosome CDS1400627 513 + 0.621832
rluC pseudouridylate synthasechromosome CDS2453255 984 - 0.671748
rluD ribosomal large subunit pseudouridine synthase Dchromosome CDS3659739 996 - 0.701807
rnD ribonuclease Dchromosome CDS2711524 1089 + 0.666667
rne ribonuclease Echromosome CDS2454642 3564 + 0.677048
rng ribonuclease Gchromosome CDS3095984 1500 - 0.653333
rnpA ribonuclease P protein componentchromosome CDS5075361 447 - 0.693512
rph ribonuclease PHchromosome CDS3863560 726 + 0.676309
rplA 50S ribosomal protein L1chromosome CDS1039628 699 + 0.645207
rplB 50S ribosomal protein L2chromosome CDS1057478 828 + 0.644928
rplC 50S ribosomal protein L3chromosome CDS1055903 651 + 0.620584
rplD 50S ribosomal protein L4chromosome CDS1056566 606 + 0.612211
rplE 50S ribosomal protein L5chromosome CDS1061294 543 + 0.569061
rplF 50S ribosomal protein L6chromosome CDS1062780 528 + 0.628788
rplI 50S ribosomal protein L9chromosome CDS1824637 450 + 0.64
rplJ 50S ribosomal protein L10chromosome CDS1040875 534 + 0.61985
rplK 50S ribosomal protein L11chromosome CDS1039196 429 + 0.624709
rplL 50S ribosomal protein L7/L12chromosome CDS1041463 366 + 0.617486
rplN 50S ribosomal protein L14chromosome CDS1060581 369 + 0.609756
rplO 50S ribosomal protein L15chromosome CDS1064640 444 + 0.632883
rplP 50S ribosomal protein L16chromosome CDS1059687 414 + 0.615942
rplQ 50S ribosomal protein L17chromosome CDS1069420 384 + 0.632812
rplR 50S ribosomal protein L18chromosome CDS1063390 360 + 0.644444
rplS 50S ribosomal protein L19chromosome CDS1402107 408 + 0.620098
rplT 50S ribosomal protein L20chromosome CDS2922580 360 - 0.6
rplU 50S ribosomal protein L21chromosome CDS1337916 321 + 0.598131
rplV 50S ribosomal protein L22chromosome CDS1058588 342 + 0.590643
rplW 50S ribosomal protein L23chromosome CDS1057168 300 + 0.553333
rplX 50S ribosomal protein L24chromosome CDS1060965 318 + 0.613208
rplY 50S ribosomal protein L25chromosome CDS1033670 630 + 0.606349
rpmA 50S ribosomal protein L27chromosome CDS1338249 261 + 0.624521
rpmB 50S ribosomal protein L28chromosome CDS4783936 237 - 0.603376
rpmC 50S ribosomal protein L29chromosome CDS1060100 186 + 0.612903
rpmD 50S ribosomal protein L30chromosome CDS1064474 162 + 0.592593
rpmE 50S ribosomal protein L31chromosome CDS3845312 243 - 0.555556
rpmF 50S ribosomal protein L32chromosome CDS1164630 195 + 0.630769
rpmG 50S ribosomal protein L33chromosome CDS4783755 168 - 0.488095
rpmH 50S ribosomal protein L34chromosome CDS5075846 141 - 0.666667
rpmI 50S ribosomal protein L35chromosome CDS2922950 198 - 0.616162
rpmJ 50S ribosomal protein L36chromosome CDS2589252 126 + 0.619048
rpsA 30S ribosomal protein S1chromosome CDS2586535 1680 - 0.61131
rpsB 30S ribosomal protein S2chromosome CDS1599127 828 - 0.637681
rpsC 30S ribosomal protein S3chromosome CDS1058947 735 + 0.614966
rpsD 30S RIBOSOMAL PROTEIN S4chromosome CDS1067566 627 + 0.604466
rpsE 30S ribosomal protein S5chromosome CDS1063909 543 + 0.639042
rpsF 30S ribosomal protein S6chromosome CDS1823668 435 + 0.618391
rpsG 30S ribosomal protein S7chromosome CDS1051163 468 + 0.581197
rpsH 30S ribosomal protein S8chromosome CDS1062366 399 + 0.58396
rpsI 30S ribosomal protein S9chromosome CDS577313 393 + 0.636132
rpsJ 30S ribosomal protein S10chromosome CDS1055580 312 + 0.602564
rpsL 30S ribosomal protein S12chromosome CDS1050776 375 + 0.616
rpsM 30S ribosomal protein S13chromosome CDS1066791 357 + 0.619048
rpsN 30S ribosomal protein S14chromosome CDS1061855 306 + 0.601307
rpsO 30S ribosomal protein S15chromosome CDS2981069 261 - 0.605364
rpsP 30S ribosomal protein S16chromosome CDS1400323 261 + 0.666667
rpsQ 30S ribosomal protein S17chromosome CDS1060297 270 + 0.577778
rpsR 30S ribosomal protein S18chromosome CDS1824114 231 + 0.580087
rpsS 30S ribosomal protein S19chromosome CDS1058312 270 + 0.562963
rpsT 30S ribosomal protein S20chromosome CDS1339904 270 - 0.622222
rpsU 30S ribosomal protein S21chromosome CDS4536489 216 + 0.62963
rsmC ribosomal RNA small subunit methyltransferase Cchromosome CDS4339936 1068 - 0.708802
rsuA ribosomal small subunit pseudouridylate synthasechromosome CDS4339226 714 - 0.686275
serS seryl-tRNA synthetasechromosome CDS1862425 1281 + 0.649493
smpA outer membrane proteinchromosome CDS1715632 396 - 0.613636
sun Sun proteinchromosome CDS4454675 1314 - 0.700913
tdcF TdcF proteinchromosome CDS3889916 504 - 0.638889
tgt queuine tRNA-ribosyltransferasechromosome CDS2810955 1146 - 0.678883
thrS threonyl-tRNA synthetasechromosome CDS2923979 1911 - 0.632653
trmD tRNA (guanine-N1-)-methyltransferasechromosome CDS1401204 759 + 0.657444
trmU tRNA methyltransferasechromosome CDS2301503 1137 - 0.674582
trpS tryptophanyl-tRNA synthetasechromosome CDS4654367 1296 - 0.64892
truA tRNA pseudouridine synthase Achromosome CDS3019729 774 - 0.683463
truB tRNA pseudouridine synthase Bchromosome CDS2981487 927 - 0.688242
tsf elongation factor Tschromosome CDS1598078 927 - 0.634304
tufA elongation factor Tuchromosome CDS1036595 1191 + 0.619647
tufB elongation factor Tuchromosome CDS1053934 1191 + 0.622166
tyrS tyrosyl-tRNA synthetasechromosome CDS4563621 1212 - 0.633663
valS valyl-tRNA synthetasechromosome CDS771736 2835 - 0.643386
ychF GTP-binding proteinchromosome CDS1035008 1092 + 0.626374
yeiP elongation factor Pchromosome CDS2132752 567 - 0.62963
yfcB adenine-specific methylasechromosome CDS3027419 927 - 0.661273
yjgF translation initiation inhibitorchromosome CDS3848853 381 - 0.664042