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2024-05-03 17:18:07

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Deinococcus radiodurans, R1

Number of genes found: 171

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Deinococcus radiodurans, R1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
DR0033 conserved hypothetical proteinchromosome 1 CDS33903 474 - 0.654008
DR0066 aminoglycoside 3`-phosphotransferasechromosome 1 CDS63356 792 - 0.705808
DR0085 ribosomal protein L27chromosome 1 CDS87904 276 - 0.619565
DR0086 ribosomal protein L21chromosome 1 CDS88194 510 - 0.611765
DR0098 ribosomal protein S6chromosome 1 CDS100030 309 + 0.614887
DR0101 ribosomal protein S18chromosome 1 CDS101418 279 + 0.637993
DR0102 ribosomal protein L9chromosome 1 CDS101709 441 + 0.643991
DR0119 elongation factor Pchromosome 1 CDS117584 558 - 0.607527
DR0148 valyl-tRNA synthetasechromosome 1 CDS147105 2742 - 0.652808
DR0174 ribosomal protein L13chromosome 1 CDS175469 525 + 0.638095
DR0175 ribosomal protein S9chromosome 1 CDS175996 402 + 0.674129
DR0197 conserved hypothetical proteinchromosome 1 CDS201504 612 - 0.70915
DR0209 gid proteinchromosome 1 CDS209636 1449 - 0.670807
DR0231 RNA methyltransferase, putativechromosome 1 CDS230497 477 + 0.672956
DR0235 6-aminohexanoate-cyclic-dimer hydrolasechromosome 1 CDS231866 1686 + 0.710558
DR0245 hemK proteinchromosome 1 CDS241532 837 - 0.724014
DR0305 ribosomal protein S12chromosome 1 CDS306969 396 + 0.643939
DR0306 ribosomal protein S7chromosome 1 CDS307475 471 + 0.66879
DR0307 elongation factor Gchromosome 1 CDS308203 2097 + 0.635193
DR0309 elongation factor TUchromosome 1 CDS311142 1218 + 0.642857
DR0310 ribosomal protein S10chromosome 1 CDS312365 324 + 0.623457
DR0311 ribosomal protein L3chromosome 1 CDS312685 636 + 0.652516
DR0312 ribosomal protein L4chromosome 1 CDS313320 618 + 0.661812
DR0313 ribosomal protein L23chromosome 1 CDS313934 288 + 0.635417
DR0314 ribosomal protein L2chromosome 1 CDS314235 828 + 0.672705
DR0315 ribosomal protein S19chromosome 1 CDS315074 288 + 0.583333
DR0316 ribosomal protein L22chromosome 1 CDS315358 405 + 0.624691
DR0317 ribosomal protein S3chromosome 1 CDS315762 750 + 0.678667
DR0318 ribosomal protein L16chromosome 1 CDS316508 429 + 0.620047
DR0319 ribosomal protein L29chromosome 1 CDS316923 204 + 0.632353
DR0320 ribosomal protein S17chromosome 1 CDS317123 291 + 0.608247
DR0321 ribosomal protein L14chromosome 1 CDS317410 405 + 0.681481
DR0322 ribosomal protein L24chromosome 1 CDS317814 348 + 0.632184
DR0323 ribosomal protein L5chromosome 1 CDS318280 543 + 0.59116
DR0335 ATP-dependent RNA helicase, putativechromosome 1 CDS331099 1437 + 0.718163
DR0341 ribosomal protein S15chromosome 1 CDS339492 276 + 0.655797
DR0360 hypothetical proteinchromosome 1 CDS359866 432 + 0.685185
DR0372 lysyl-tRNA synthetasechromosome 1 CDS371543 1578 + 0.649556
DR0393 elongation factor Gchromosome 1 CDS391614 2037 + 0.68974
DR0427 general stress protein Ctc, putativechromosome 1 CDS426085 762 + 0.639108
DR0485 glutamyl-tRNA synthetasechromosome 1 CDS487540 1578 + 0.647022
DR0529 hypothetical proteinchromosome 1 CDS530455 264 - 0.727273
DR0558 tryptophanyl-tRNA synthetasechromosome 1 CDS563314 993 - 0.635448
DR0576 RNA methyltransferase, putativechromosome 1 CDS588583 768 + 0.683594
DR0604 acetyltransferase, putativechromosome 1 CDS616378 567 - 0.675485
DR0653 conserved hypothetical proteinchromosome 1 CDS664043 531 - 0.700565
DR0710 mannose-1-phosphate guanyltransferase, putativechromosome 1 CDS727033 849 - 0.650177
DR0748 RNA methyltransferase, TrmH familychromosome 1 CDS764031 741 - 0.703104
DR0755 ribosomal protein L19chromosome 1 CDS770965 501 + 0.670659
DR0796 acetyltransferase, putativechromosome 1 CDS811086 561 - 0.705882
DR0798 acetyltransferase, putativechromosome 1 CDS812222 624 - 0.652244
DR0825 ribosomal protein L31chromosome 1 CDS837572 222 + 0.603604
DR0890 conserved hypothetical proteinchromosome 1 CDS898628 438 + 0.696347
DR0896 ribosomal large subunit pseudouridine synthase Bchromosome 1 CDS903759 774 + 0.710594
DR0901 ribosome-binding factor A, putativechromosome 1 CDS908143 387 + 0.682171
DR0914 conserved hypothetical proteinchromosome 1 CDS927660 897 + 0.735786
DR0961 ribosomal large subunit pseudouridine synthase, Rlu familychromosome 1 CDS974336 774 - 0.697674
DR0976 peptide chain release factor 1chromosome 1 CDS991972 1128 - 0.687943
DR0983 tRNA nucleotidyltransferase, putativechromosome 1 CDS999399 1125 - 0.742222
DR1017 rRNA methylasechromosome 1 CDS1029452 798 + 0.719298
DR1055 aspartyl-tRNA synthetase, non-discriminatingchromosome 1 CDS1065318 1308 - 0.657492
DR1082 light-repressed protein A, putativechromosome 1 CDS1089419 576 + 0.647569
DR1093 tryptophanyl-tRNA synthetasechromosome 1 CDS1101113 1056 + 0.690341
DR1150 conserved hypothetical proteinchromosome 1 CDS1159623 1518 + 0.663373
DR1191 tRNA nucleotidyltransferase/poly A polymerase family proteinchromosome 1 CDS1199855 1305 + 0.721073
DR1251 hypothetical proteinchromosome 1 CDS1256947 558 + 0.639785
DR1266 prolyl-tRNA synthetasechromosome 1 CDS1273515 1500 + 0.645333
DR1275 Glu-tRNA(Gln) amidotransferase, subunit Cchromosome 1 CDS1281624 291 + 0.67354
DR1276 seryl-tRNA synthetasechromosome 1 CDS1281986 1278 + 0.664319
DR1294 ribosomal protein S16chromosome 1 CDS1301344 255 - 0.65098
DR1309 ribosomal protein S20chromosome 1 CDS1315979 279 - 0.65233
DR1311 methionine aminopeptidasechromosome 1 CDS1317290 780 - 0.652564
DR1323 tRNA pseudouridine 55 synthase, putativechromosome 1 CDS1327901 927 - 0.709817
DR1335 isoleucyl-tRNA synthetasechromosome 1 CDS1339259 3237 - 0.665431
DR1347 aspartyl-tRNA synthetase, discriminatingchromosome 1 CDS1352139 1734 - 0.662053
DR1349 histidyl-tRNA synthetasechromosome 1 CDS1354258 1284 - 0.692368
DR1377 amidase, putativechromosome 1 CDS1384371 1185 + 0.70211
DR1383 hypothetical proteinchromosome 1 CDS1389480 600 - 0.623333
DR1386 conserved hypothetical proteinchromosome 1 CDS1391767 1098 + 0.629326
DR1433 methionyl-tRNA synthetasechromosome 1 CDS1433912 2046 + 0.655425
DR1510 ribosome recycling factorchromosome 1 CDS1525895 552 - 0.615942
DR1512 elongation factor Tschromosome 1 CDS1527349 795 - 0.625157
DR1513 ribosomal protein S2chromosome 1 CDS1528236 795 - 0.641509
DR1521 ribosomal protein L11 methyltransferase, putativechromosome 1 CDS1536271 822 - 0.687348
DR1526 dimethyladenosine transferasechromosome 1 CDS1542334 1011 - 0.679525
DR1534 acetyltransferase, putativechromosome 1 CDS1550885 549 - 0.688525
DR1553 peptide chain release factor 3chromosome 1 CDS1570273 1617 - 0.649969
DR1577 s-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome 1 CDS1597834 1089 - 0.69146
DR1585 ribonuclease PHchromosome 1 CDS1605150 741 - 0.677463
DR1625 amidase, putativechromosome 1 CDS1646352 1641 + 0.699573
DR1670 cysteinyl-tRNA synthetasechromosome 1 CDS1695607 1599 - 0.644153
DR1684 pseudouridine synthase, putativechromosome 1 CDS1706952 966 + 0.697723
DR1687 glutamyl-tRNA synthetase-related proteinchromosome 1 CDS1708848 888 + 0.724099
DR1690 tRNA delta-2-isopentenylpyrophosphate transferasechromosome 1 CDS1712255 921 - 0.725299
DR1693 hypothetical proteinchromosome 1 CDS1715891 753 + 0.675963
DR1698 conserved hypothetical proteinchromosome 1 CDS1720843 1002 + 0.681637
DR1702 kanamycin resistance protein-related proteinchromosome 1 CDS1724954 567 - 0.694885
DR1716 conserved hypothetical proteinchromosome 1 CDS1740056 555 - 0.700901
DR1754 conserved hypothetical proteinchromosome 1 CDS1782142 402 + 0.629353
DR1759 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome 1 CDS1787323 1242 + 0.660225
DR1789 ribosomal large subunit pseudouridine synthase Dchromosome 1 CDS1816987 1017 + 0.704031
DR1799 initiation factor 2chromosome 1 CDS1826681 1794 + 0.641026
DR1800 acetyltransferase, putativechromosome 1 CDS1828575 540 + 0.7
DR1814 hypothetical proteinchromosome 1 CDS1840323 429 + 0.67366
DR1842 hypothetical proteinchromosome 1 CDS1868602 417 - 0.717026
DR1856 glutamyl-tRNA(Gln) amidotransferase, subunit Achromosome 1 CDS1880131 1449 + 0.703934
DR1862 SUA5-related proteinchromosome 1 CDS1884384 693 - 0.759019
DR1983 ribosomal protein S1, putativechromosome 1 CDS2005829 1890 + 0.65291
DR2004 ribosomal protein L20chromosome 1 CDS2025228 357 - 0.630252
DR2005 ribosomal protein L35chromosome 1 CDS2025588 201 - 0.59204
DR2010 16S rRNA processing protein RimM, putativechromosome 1 CDS2028250 567 + 0.705467
DR2011 tRNA (guanine-N1)-methyltransferasechromosome 1 CDS2028821 840 + 0.691667
DR2043 ribosomal protein L7/L12chromosome 1 CDS2058546 369 - 0.598916
DR2044 ribosomal protein L10chromosome 1 CDS2058978 510 - 0.64902
DR2045 ribosomal protein L1chromosome 1 CDS2059694 702 - 0.679487
DR2046 ribosomal protein L11chromosome 1 CDS2060388 435 - 0.634483
DR2049 ribosomal protein L33chromosome 1 CDS2061817 249 - 0.586345
DR2050 elongation factor TUchromosome 1 CDS2062196 1218 - 0.639573
DR2059 glycyl-tRNA synthetasechromosome 1 CDS2073487 1566 + 0.618774
DR2063 polynucleotide phosphorylasechromosome 1 CDS2076870 2433 + 0.668311
DR2081 threonyl-tRNA synthetasechromosome 1 CDS2094421 1950 - 0.643077
DR2087 initiation factor 3chromosome 1 CDS2099093 639 - 0.638498
DR2109 ribosomal protein S14chromosome 1 CDS2118762 324 + 0.645062
DR2110 ribosomal protein S8chromosome 1 CDS2119330 402 + 0.649254
DR2111 ribosomal protein L6chromosome 1 CDS2119749 639 + 0.643192
DR2112 ribosomal protein L18chromosome 1 CDS2120387 345 + 0.66087
DR2113 ribosomal protein S5chromosome 1 CDS2120715 591 + 0.654822
DR2114 ribosomal protein L30chromosome 1 CDS2121302 168 + 0.625
DR2115 ribosomal protein L15chromosome 1 CDS2121466 471 + 0.677282
DR2123 initiation factor 1chromosome 1 CDS2129051 258 + 0.596899
DR2124 ribosomal protein L36chromosome 1 CDS2129426 114 + 0.517544
DR2125 ribosomal protein S13chromosome 1 CDS2129542 381 + 0.614173
DR2126 ribosomal protein S11chromosome 1 CDS2129926 396 + 0.664141
DR2127 ribosomal protein S4chromosome 1 CDS2130469 618 + 0.619741
DR2129 ribosomal protein L17chromosome 1 CDS2132212 351 + 0.683761
DR2151 ribonuclease P protein componentchromosome 1 CDS2152405 501 - 0.726547
DR2152 ribosomal protein L34chromosome 1 CDS2152999 144 - 0.659722
DR2168 sun protein, putativechromosome 1 CDS2164411 1320 - 0.706061
DR2174 leucyl-tRNA synthetasechromosome 1 CDS2170158 2625 + 0.646857
DR2194 ribosomal protein S6 modification proteinchromosome 1 CDS2190374 888 + 0.673423
DR2211 rRNA methylase SpoUchromosome 1 CDS2209209 693 + 0.683983
DR2290 pseudouridylate synthase Ichromosome 1 CDS2288637 843 - 0.698695
DR2300 alanyl-tRNA synthetasechromosome 1 CDS2297503 2673 + 0.674149
DR2339 2`-5` RNA ligase, putativechromosome 1 CDS2337094 705 + 0.696454
DR2353 L-asparaginasechromosome 1 CDS2351555 1044 + 0.701149
DR2354 phenylalanyl-tRNA synthetase, alpha subunitchromosome 1 CDS2352747 1020 + 0.653922
DR2366 ribosomal protein L32chromosome 1 CDS2364753 183 - 0.63388
DR2372 peptidyl-tRNA hydrolasechromosome 1 CDS2370797 648 - 0.689815
DR2427 hypothetical proteinchromosome 1 CDS2429364 852 + 0.653756
DR2434 polypeptide deformylasechromosome 1 CDS2435717 699 + 0.645207
DR2435 methionyl-tRNA formyltransferasechromosome 1 CDS2436412 957 + 0.702194
DR2440 nifR3 proteinchromosome 1 CDS2440624 1221 - 0.702703
DR2443 ribosomal protein N-acetyltransferase, putativechromosome 1 CDS2443193 561 - 0.675579
DR2504 hypothetical proteinchromosome 1 CDS2503646 825 - 0.66303
DR2512 protein translation inhibitor, putativechromosome 1 CDS2514111 378 - 0.661376
DR2524 ribosomal protein L28chromosome 1 CDS2526817 246 - 0.609756
DR2555 glutamyl-tRNA(Gln) amidotransferase, subunit Bchromosome 1 CDS2557407 1533 - 0.664057
DR2568 arginyl-tRNA synthetasechromosome 1 CDS2570368 1830 + 0.667213
DR2578 queuine tRNA ribosyltransferasechromosome 1 CDS2583500 1185 - 0.603376
DR2611 glutaminyl-tRNA synthetasechromosome 1 CDS2619535 2559 - 0.692458
DR2624 hypothetical proteinchromosome 1 CDS2634670 570 + 0.694737
DR2634 tyrosyl-tRNA synthetasechromosome 1 CDS2644264 1236 + 0.645631
DRA0069 cleavage and polyadenylation specificity factor-related proteinchromosome 2 CDS74064 1500 + 0.687333
DRA0074 hypothetical proteinchromosome 2 CDS79518 723 - 0.616874
DRA0077 hypothetical proteinchromosome 2 CDS83459 429 + 0.652681
DRA0087 hypothetical proteinchromosome 2 CDS87486 501 + 0.638723
DRA0189 conserved hypothetical proteinchromosome 2 CDS197036 1515 + 0.654125
DRA0190 hypothetical proteinchromosome 2 CDS198551 1572 - 0.688931
DRA0234 hypothetical proteinchromosome 2 CDS243966 174 - 0.655172
DRB0098 hypothetical proteinMP1 CDS117655 1242 - 0.710145
DRC0008 hypothetical proteinCP1 CDS7470 588 - 0.573129