Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Streptococcus pneumoniae R6, R6
Number of genes found: 155
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Streptococcus pneumoniae R6, R6 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
DEAD/H | DEAD RNA helicase | chromosome | CDS | 1322922 | 1083 | + | 0.409049 | |
alaS | Alanyl-tRNA synthetase | chromosome | CDS | 1238887 | 2619 | - | 0.445972 | |
aldR | Transcription regulator | chromosome | CDS | 1410440 | 381 | - | 0.435696 | |
ansB | L-asparaginase (L-asparagine amidohydrolase) | chromosome | CDS | 1782113 | 963 | + | 0.457944 | |
argS | Arginyl-tRNA synthetase(arginine--tRNA ligase) (ARGRS) | chromosome | CDS | 1869051 | 1692 | + | 0.423759 | |
asnS | Asparaginyl-tRNA synthetase (asparagine--tRNA ligase) | chromosome | CDS | 1375766 | 1344 | - | 0.438244 | |
aspS | Aspartyl-tRNA synthetase (aspartate-tRNA ligase) | chromosome | CDS | 1906865 | 1764 | - | 0.456349 | |
cca | tRNA nucleotidyltransferase | chromosome | CDS | 1399941 | 1200 | - | 0.439167 | |
cspR | rRNA methylase | chromosome | CDS | 432843 | 543 | + | 0.412523 | |
cysS | Cysteinyl-tRNA synthetase | chromosome | CDS | 519634 | 1344 | + | 0.443452 | |
def | Formylmethionine deformylase | chromosome | CDS | 1392416 | 411 | - | 0.454988 | |
efp | Elongation factor P | chromosome | CDS | 388250 | 561 | - | 0.409982 | |
fms | Peptide deformylase, N-formylmethionylaminoacyl-tRNA deformylase | chromosome | CDS | 1300763 | 612 | + | 0.429739 | |
fmt | Methionyl-tRNA formyltransferase | chromosome | CDS | 1560141 | 936 | - | 0.459402 | |
frr | Ribosome recycling factor | chromosome | CDS | 843969 | 558 | + | 0.422939 | |
fusA | Elongation factor G | chromosome | CDS | 248889 | 2082 | + | 0.432757 | |
gatA | Glu-tRNAGln amidotransferase subunit A | chromosome | CDS | 390381 | 1467 | - | 0.453306 | |
gatB | Glutamyl tRNA-Gln amidotransferase subunit B | chromosome | CDS | 388939 | 1443 | - | 0.456687 | |
gatC | Glutamyl tRNA-Gln amidotransferase, subunit C | chromosome | CDS | 391847 | 303 | - | 0.458746 | |
gidA | Glucose inhibited division protein | chromosome | CDS | 841805 | 1335 | + | 0.451685 | |
gltX | Glutamyl-tRNA synthetase (glutamate--tRNA ligase) | chromosome | CDS | 1857547 | 1461 | - | 0.408624 | |
glyQ | Glycyl-tRNA synthetase alpha chain | chromosome | CDS | 1316630 | 918 | - | 0.436819 | |
glyS | Glycyl-tRNA synthetase beta chain | chromosome | CDS | 1314334 | 2037 | - | 0.419244 | |
hemK | HemK protein homolog; possible protoporphyrinogen oxidase | chromosome | CDS | 911365 | 840 | + | 0.379762 | |
hisS | Histidyl-tRNA synthetase | chromosome | CDS | 1911671 | 1290 | - | 0.465891 | |
ileS | Isoleucyl-tRNA synthetase | chromosome | CDS | 1480465 | 2793 | - | 0.426781 | |
infA | Translation initiation factor IF-1 | chromosome | CDS | 207771 | 273 | + | 0.384615 | |
infB | Initiation factor IF2 | chromosome | CDS | 481913 | 2793 | + | 0.448264 | |
infC | Translation initiation factor IF-3 | chromosome | CDS | 855261 | 588 | + | 0.396259 | |
ksgA | Dimethyladenosine transferase | chromosome | CDS | 1770284 | 873 | - | 0.463918 | |
leuS | Leucyl-tRNA synthetase | chromosome | CDS | 227269 | 2502 | + | 0.446043 | |
lysS | Lysyl-tRNA synthetase (lysine--tRNA ligase) (LYSRS) | chromosome | CDS | 632850 | 1491 | + | 0.434608 | |
map | Methionine aminopeptidase | chromosome | CDS | 976908 | 861 | + | 0.416957 | |
miaA | tRNA isopentenylpyrophosphate transferase | chromosome | CDS | 602334 | 936 | + | 0.442308 | |
pheS | Phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 505506 | 1128 | + | 0.453901 | |
pnpA | Polyribonucleotide nucleotidyltransferase | chromosome | CDS | 515696 | 2328 | + | 0.439003 | |
prfA | Peptide chain release factor I | chromosome | CDS | 910286 | 1080 | + | 0.450926 | |
prfB | Peptide chain release factor 2 | chromosome | CDS | 668470 | 990 | + | 0.426263 | |
prfC | Peptide chain release factor 3 | chromosome | CDS | 392362 | 1545 | + | 0.457605 | |
prmA | Ribosomal protein methyltransferase | chromosome | CDS | 1583980 | 978 | - | 0.480573 | |
proS | Prolyl-tRNA synthetase | chromosome | CDS | 236774 | 1854 | + | 0.430421 | |
pth | Peptidyl-tRNA hydrolase | chromosome | CDS | 4186 | 570 | + | 0.333333 | |
queA | S-adenosylmethionine:tRNAribosyltransferase-isom erase | chromosome | CDS | 1267181 | 1041 | + | 0.473583 | |
rbfA | Ribosome binding factor A | chromosome | CDS | 484929 | 378 | + | 0.415344 | |
rheB | ATP-dependent RNA helicase | chromosome | CDS | 674561 | 1344 | + | 0.404762 | |
rimM | 16S rRNA processing protein RimM | chromosome | CDS | 688409 | 519 | + | 0.402698 | |
rluB | Ribosomal large subunit pseudouridine synthase B | chromosome | CDS | 1660220 | 723 | - | 0.456432 | |
rluD | Ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 1799011 | 876 | + | 0.396119 | |
rluD | 23S rRNA pseudouridine synthase | chromosome | CDS | 988523 | 897 | + | 0.409142 | |
rluD | 23S rRNA pseudouridine synthase (supresses ftsH(ts) mutants) | chromosome | CDS | 830091 | 888 | + | 0.44482 | |
rnpA | Ribonuclease P-protein component | chromosome | CDS | 1828283 | 372 | - | 0.379032 | |
rplA | 50S Ribosomal protein L1 | chromosome | CDS | 555382 | 690 | + | 0.407246 | |
rplB | 50S Ribosomal protein L2 | chromosome | CDS | 197664 | 834 | + | 0.446043 | |
rplC | 50S Ribosomal protein L3 | chromosome | CDS | 196076 | 627 | + | 0.430622 | |
rplD | 50S Ribosomal protein L4 | chromosome | CDS | 196727 | 624 | + | 0.434295 | |
rplE | 50S Ribosomal protein L5 | chromosome | CDS | 201623 | 543 | + | 0.406998 | |
rplF | 50S Ribosomal protein L6 | chromosome | CDS | 203327 | 537 | + | 0.404097 | |
rplI | 50S Ribosomal protein subunit L9 | chromosome | CDS | 2002111 | 453 | - | 0.364238 | |
rplJ | 50S Ribosomal protein L10 | chromosome | CDS | 1207765 | 501 | - | 0.431138 | |
rplK | 50S Ribosomal protein L11 | chromosome | CDS | 554749 | 426 | + | 0.413146 | |
rplL | 50S Ribosomal protein L12 | chromosome | CDS | 1207321 | 384 | - | 0.403646 | |
rplM | 50S Ribosomal protein L13 | chromosome | CDS | 272399 | 447 | + | 0.39821 | |
rplN | 50S Ribosomal protein L14 | chromosome | CDS | 200848 | 369 | + | 0.441734 | |
rplO | 50S Ribosomal protein L15 | chromosome | CDS | 205156 | 441 | + | 0.414966 | |
rplP | 50S Ribosomal protein L16 | chromosome | CDS | 199908 | 414 | + | 0.444444 | |
rplQ | 50S Ribosomal protein L17 | chromosome | CDS | 209958 | 387 | + | 0.416021 | |
rplR | 50S Ribosomal protein L18 | chromosome | CDS | 203947 | 357 | + | 0.456583 | |
rplS | 50S Ribosomal protein L19 | chromosome | CDS | 1173490 | 348 | - | 0.425287 | |
rplT | 50S Ribosomal protein L20 | chromosome | CDS | 856133 | 360 | + | 0.408333 | |
rplU | 50S Ribosomal protein L21 | chromosome | CDS | 993785 | 315 | + | 0.384127 | |
rplV | 50S Ribosomal protein L22 | chromosome | CDS | 198894 | 345 | + | 0.414493 | |
rplW | 50S Ribosomal protein L23 | chromosome | CDS | 197350 | 297 | + | 0.363636 | |
rplX | 50S Ribosomal protein L24 | chromosome | CDS | 201294 | 306 | + | 0.395425 | |
rpmA | 50S Ribosomal protein L27 | chromosome | CDS | 994500 | 270 | + | 0.437037 | |
rpmB | 50S Ribosomal protein L28 | chromosome | CDS | 394776 | 189 | + | 0.391534 | |
rpmC | 50S Ribosomal protein L29 | chromosome | CDS | 200331 | 207 | + | 0.352657 | |
rpmD | 50S Ribosomal protein L30 | chromosome | CDS | 204829 | 183 | + | 0.371585 | |
rpmE | 50S ribosomal protein L31 | chromosome | CDS | 1176610 | 243 | + | 0.419753 | |
rpmF | 50S Ribosomal protein L32 | chromosome | CDS | 1924956 | 183 | + | 0.415301 | |
rpmG | 50S Ribosomal protein L33 | chromosome | CDS | 867410 | 150 | + | 0.346667 | |
rpmG | 50S Ribosomal protein L33 | chromosome | CDS | 1796524 | 153 | - | 0.411765 | |
rpmG | 50S Ribosomal protein L33 | chromosome | CDS | 1925154 | 150 | + | 0.38 | |
rpmH | 50S Ribosomal protein L34 | chromosome | CDS | 1778068 | 135 | - | 0.466667 | |
rpmI | 50S Ribosomal protein L35 | chromosome | CDS | 855881 | 201 | + | 0.412935 | |
rpmJ | 50S Ribosomal protein L36 | chromosome | CDS | 208068 | 117 | + | 0.376068 | |
rpsA | 30S Ribosomal protein S1 | chromosome | CDS | 759737 | 1203 | + | 0.409809 | |
rpsB | 30S Ribosomal protein S2 | chromosome | CDS | 2011840 | 780 | - | 0.419231 | |
rpsC | 30S Ribosomal protein S3 | chromosome | CDS | 199251 | 654 | + | 0.429664 | |
rpsD | 30S Ribosomal protein S4 | chromosome | CDS | 85780 | 612 | + | 0.436274 | |
rpsE | 30S Ribosomal protein S5 | chromosome | CDS | 204321 | 495 | + | 0.430303 | |
rpsF | 30S Ribosomal protein S6 (S6) | chromosome | CDS | 1375323 | 291 | - | 0.38488 | |
rpsG | 30S Ribosomal protein S7 | chromosome | CDS | 247994 | 471 | + | 0.443737 | |
rpsH | 30S Ribosomal protein S8 (S8) | chromosome | CDS | 202737 | 399 | + | 0.390977 | |
rpsI | 30S Ribosomal protein S9 | chromosome | CDS | 272865 | 393 | + | 0.450382 | |
rpsJ | 30S Ribosomal protein S10 | chromosome | CDS | 195551 | 309 | + | 0.420712 | |
rpsK | 30S Ribosomal protein S11 | chromosome | CDS | 208585 | 384 | + | 0.4375 | |
rpsL | 30S Ribosomal protein S12 | chromosome | CDS | 247561 | 414 | + | 0.432367 | |
rpsM | 30S Ribosomal protein S13 | chromosome | CDS | 208202 | 366 | + | 0.418033 | |
rpsN | 30S Ribosomal protein S14 | chromosome | CDS | 202183 | 270 | + | 0.440741 | |
rpsO | 30S Ribosomal protein S15 | chromosome | CDS | 1449589 | 270 | - | 0.414815 | |
rpsP | 30S Ribosomal protein S16 | chromosome | CDS | 686482 | 273 | + | 0.399267 | |
rpsQ | 30S Ribosomal protein S17 | chromosome | CDS | 200562 | 261 | + | 0.386973 | |
rpsR | 30S Ribosomal protein S18 | chromosome | CDS | 1374570 | 240 | - | 0.4125 | |
rpsS | 30S Ribosomal protein S19 | chromosome | CDS | 198601 | 282 | + | 0.400709 | |
rpsT | 30S Ribosomal protein subunit S20 | chromosome | CDS | 737815 | 252 | - | 0.384921 | |
rpsU | 30S Ribosomal protein S21 | chromosome | CDS | 1266019 | 201 | - | 0.368159 | |
rsuA | Ribosomal small subunit pseudouridine synthase A | chromosome | CDS | 258090 | 723 | + | 0.44675 | |
rsuA | Ribosomal small subunit pseudouridine synthase A | chromosome | CDS | 608867 | 726 | - | 0.433884 | |
serS | Seryl-tRNA synthetase | chromosome | CDS | 372211 | 1338 | - | 0.443199 | |
spnII-interrupted-C | Uncharacterized restriction enzyme, interrupted-C | chromosome | CDS | 1099497 | 3255 | - | 0.375422 | |
spr0004 | Conserved hypothetical protein | chromosome | CDS | 3000 | 1116 | + | 0.399642 | |
spr0007 | Conserved hypothetical protein | chromosome | CDS | 8323 | 267 | + | 0.348315 | |
spr0022 | Conserved hypothetical protein | chromosome | CDS | 24122 | 468 | + | 0.438034 | |
spr0107 | Hypothetical protein | chromosome | CDS | 115766 | 468 | + | 0.299145 | |
spr0236 | Conserved hypothetical protein | chromosome | CDS | 229964 | 696 | + | 0.446839 | |
spr0440 | Hypothetical protein | chromosome | CDS | 441113 | 4980 | + | 0.415261 | |
spr0480 | Conserved hypothetical protein | chromosome | CDS | 481597 | 300 | + | 0.413333 | |
spr0490 | Conserved hypothetical protein | chromosome | CDS | 490168 | 558 | + | 0.46595 | |
spr0689 | Hypothetical protein | chromosome | CDS | 690017 | 321 | - | 0.389408 | |
spr0743 | Conserved hypothetical protein | chromosome | CDS | 739884 | 591 | + | 0.399323 | |
spr0855 | Conserved hypothetical protein | chromosome | CDS | 849329 | 570 | + | 0.389474 | |
spr0926 | Conserved hypothetical protein | chromosome | CDS | 912179 | 612 | + | 0.437909 | |
spr0932 | Conserved hypothetical protein | chromosome | CDS | 917259 | 1632 | + | 0.407476 | |
spr0967 | Conserved hypothetical protein | chromosome | CDS | 948960 | 1224 | + | 0.273693 | |
spr0990 | Conserved hypothetical protein | chromosome | CDS | 975065 | 558 | + | 0.358423 | |
spr1013 | Conserved hypothetical protein | chromosome | CDS | 994115 | 345 | + | 0.42029 | |
spr1086 | Conserved hypothetical protein | chromosome | CDS | 1082099 | 816 | - | 0.446078 | |
spr1103 | Hypothetical protein | chromosome | CDS | 1104862 | 264 | - | 0.356061 | |
spr1117 | Conserved hypothetical protein | chromosome | CDS | 1115894 | 564 | - | 0.320922 | |
spr1178 | Hypothetical protein | chromosome | CDS | 1176909 | 579 | - | 0.393782 | |
spr1259 | Conserved hypothetical protein | chromosome | CDS | 1257581 | 804 | - | 0.460199 | |
spr1275 | Conserved hypothetical protein | chromosome | CDS | 1270613 | 552 | - | 0.414855 | |
spr1392 | Conserved hypothetical protein | chromosome | CDS | 1372514 | 387 | - | 0.428941 | |
spr1440 | Conserved hypothetical protein | chromosome | CDS | 1423788 | 1575 | - | 0.435556 | |
spr1486 | Conserved hypothetical protein | chromosome | CDS | 1462462 | 444 | - | 0.414414 | |
spr1593 | Conserved hypothetical protein | chromosome | CDS | 1571297 | 312 | - | 0.387821 | |
spr1627 | Conserved hypothetical protein | chromosome | CDS | 1601116 | 447 | - | 0.38255 | |
spr1717 | Conserved hypothetical protein | chromosome | CDS | 1697564 | 1356 | - | 0.378319 | |
spr1719 | Conserved hypothetical protein | chromosome | CDS | 1699822 | 534 | + | 0.38015 | |
spr1994 | Conserved hypothetical protein | chromosome | CDS | 1986304 | 1011 | + | 0.48269 | |
spr2011 | Conserved hypothetical protein | chromosome | CDS | 2004669 | 549 | - | 0.340619 | |
sunL | rRNA methylase | chromosome | CDS | 1558835 | 1317 | - | 0.443432 | |
tgt | tRNA-guanine transglycosylase (guanine insertion enzyme) | chromosome | CDS | 1840531 | 1143 | - | 0.446194 | |
thrS | Threonyl-tRNA synthetase 1 | chromosome | CDS | 1451840 | 1983 | + | 0.450328 | |
trmD | tRNA (guanine-N1)-methyltransferase | chromosome | CDS | 688917 | 720 | + | 0.429167 | |
trmH | tRNA (guanosine-2'-O-)-methyltransferase, TrmH family | chromosome | CDS | 1301386 | 762 | + | 0.429134 | |
trmU | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | chromosome | CDS | 130562 | 1176 | + | 0.479592 | |
trpS | Tryptophanyl-tRNA synthetase | chromosome | CDS | 2025178 | 1026 | - | 0.387914 | |
truA | tRNA pseudouridine synthase A | chromosome | CDS | 1434742 | 750 | - | 0.438667 | |
truB | tRNA pseudouridine 5S synthase | chromosome | CDS | 1086726 | 879 | - | 0.449374 | |
tsf | Elongation factor TS | chromosome | CDS | 2010734 | 1041 | - | 0.411143 | |
tufA | Translation elongation factor TU | chromosome | CDS | 1326964 | 1197 | - | 0.442774 | |
tyrS | Tyrosyl-tRNA synthetase 1 | chromosome | CDS | 1888643 | 1257 | + | 0.43755 | |
valS | Valyl-tRNA synthetase | chromosome | CDS | 491701 | 2652 | + | 0.46267 | |
yjfA | Possible rRNA/tRNA methylase | chromosome | CDS | 1760461 | 759 | - | 0.41502 |