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2024-05-05 04:41:47

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Chlorobium tepidum TLS, TLS

Number of genes found: 140

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Chlorobium tepidum TLS, TLS
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA CT1173 conserved hypothetical proteinchromosome CDS1103542 480 - 0.502083
NA CT1398 conserved hypothetical proteinchromosome CDS1311309 1305 + 0.587739
NA CT0598 metallo-beta-lactamase superfamily proteinchromosome CDS599789 1410 + 0.625532
NA CT0098 ribosomal protein L11 methyltransferase, putativechromosome CDS91963 870 + 0.585057
NA CT1255 spoU rRNA methylase family proteinchromosome CDS1179613 510 - 0.601961
NA CT0397 hypothetical proteinchromosome CDS409924 1086 - 0.559853
NA CT2056 mannose-1-phosphate guanylyltransferase, putativechromosome CDS1951796 930 + 0.582796
NA CT0595 conserved hypothetical proteinchromosome CDS596629 579 + 0.632124
NA CT1489 hypothetical proteinchromosome CDS1393781 771 + 0.565499
NA CT1735 hypothetical proteinchromosome CDS1648733 357 - 0.557423
NA CT0994 cytidine and deoxycytidylate deaminase family proteinchromosome CDS944473 585 + 0.594872
NA CT1929 TIM-barrel protein, nifR3 familychromosome CDS1823480 1059 - 0.613787
NA CT1831 conserved hypothetical proteinchromosome CDS1735994 453 - 0.618102
NA CT1983 prokaryotic and mitochondrial release factors family proteinchromosome CDS1882732 420 - 0.569048
NA CT1816 translation initiation factor, eIF-2B, putativechromosome CDS1719920 1065 + 0.598122
NA CT1993 conserved hypothetical proteinchromosome CDS1890043 1335 - 0.607491
NA CT0285 GTP-binding proteinchromosome CDS296557 1092 - 0.593407
NA CT0009 RNA methyltransferase, TrmA familychromosome CDS7593 1452 + 0.601928
NA CT0004 ribonuclease P protein component, putativechromosome CDS3494 465 + 0.546237
NA CT1627 spoU rRNA methylase family proteinchromosome CDS1533414 774 - 0.596899
NA CT1566 conserved hypothetical proteinchromosome CDS1475789 1230 - 0.622764
NA CT1888 spoU rRNA methylase family proteinchromosome CDS1787500 792 - 0.64899
NA CT1067 conserved hypothetical proteinchromosome CDS1002621 180 - 0.522222
NA CT1634 hypothetical proteinchromosome CDS1544650 378 - 0.455026
NA CT1305 hypothetical proteinchromosome CDS1228332 1386 + 0.510101
NA CT0381 cytosine deaminase, putativechromosome CDS394138 459 + 0.614379
NA CT0990 polyA polymerase family proteinchromosome CDS938566 1428 - 0.598039
NA CT0291.1 MiaB-like tRNA modifying enzymechromosome CDS303506 1341 + 0.515287
NA CT1715 SUA5/yciO/yrdC family proteinchromosome CDS1627216 972 + 0.602881
NA CT0846 hypothetical proteinchromosome CDS809626 222 - 0.414414
alaS CT0166 alanyl-tRNA synthetasechromosome CDS172843 2658 + 0.625658
argS CT0015 arginyl-tRNA synthetasechromosome CDS13318 1656 + 0.591184
aspS CT1323 aspartyl-tRNA synthetasechromosome CDS1244210 1812 - 0.576159
cafA CT2260 ribonuclease Gchromosome CDS2124011 1683 - 0.585859
cdd CT0588 cytosine deaminasechromosome CDS591492 447 + 0.635347
ctc CT1362 general stress protein Ctcchromosome CDS1281772 600 + 0.568333
cysS CT2158 cysteinyl-tRNA synthetasechromosome CDS2045675 1464 + 0.596311
deaD-1 CT0597 ATP-dependent RNA helicase DeaDchromosome CDS597656 1974 + 0.591185
deaD-2 CT1034 ATP-dependent RNA helicase DeaDchromosome CDS971014 1245 - 0.576707
def CT1454 peptide deformylasechromosome CDS1365277 564 - 0.579787
efp CT0159 translation elongation factor Pchromosome CDS166774 567 - 0.546737
fmt CT1453 methionyl-tRNA formyltransferasechromosome CDS1364329 945 - 0.61164
frr CT1577 ribosome recycling factorchromosome CDS1487415 561 + 0.58467
fusA-1 CT2192 translation elongation factor Gchromosome CDS2066057 2115 - 0.542317
fusA-2 CT0144 translation elongation factor Gchromosome CDS144731 2079 - 0.561328
gatA CT0268 glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS280610 1446 + 0.599585
gatB CT2215 glutamyl-tRNA(Gln) amidotransferase subunit Bchromosome CDS2083861 1428 - 0.60084
gatC CT1833 glutamyl-tRNA(Gln) amidotransferase subunit Cchromosome CDS1736772 288 - 0.555556
gltX CT0299 glutamyl-tRNA synthetasechromosome CDS310224 1512 + 0.579365
glyS CT2255 glycyl-tRNA synthetasechromosome CDS2117985 1413 + 0.593064
hemK CT1487 hemK proteinchromosome CDS1392405 885 - 0.613559
hisS CT0236 histidyl-tRNA synthetasechromosome CDS247867 1293 + 0.597061
ileS CT0311 isoleucyl-tRNA synthetasechromosome CDS324937 3255 + 0.595084
infA CT2167 translation initiation factor IF-1chromosome CDS2052483 219 - 0.502283
infB CT0241 translation initiation factor IF-2chromosome CDS252116 2745 + 0.588342
infC CT2127 translation initiation factor IF-3chromosome CDS2015356 642 + 0.521807
ksgA CT0803 dimethyladenosine transferasechromosome CDS767218 828 - 0.561594
leuS CT1650 leucyl-tRNA synthetasechromosome CDS1561714 2424 + 0.596947
lysS CT1387 lysyl-tRNA synthetasechromosome CDS1300998 1536 + 0.58724
map CT2168 methionine aminopeptidasechromosome CDS2052761 774 - 0.549096
miaA CT0973 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS918956 990 - 0.568687
pheS CT2130 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS2016639 1026 + 0.605263
pnp CT1649 polyribonucleotide nucleotidyltransferasechromosome CDS1559399 2202 + 0.604905
prfA CT0123 peptide chain release factor 1chromosome CDS116816 1074 - 0.621043
prfC CT0818 peptide chain release factor 3chromosome CDS779123 1596 - 0.587093
proS CT1491 prolyl-tRNA synthetasechromosome CDS1394666 1446 + 0.592669
pth CT1252 peptidyl-tRNA hydrolasechromosome CDS1178098 564 + 0.567376
queA-1 CT0545 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS553309 1023 - 0.609971
queA-2 CT1316 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1238996 1041 + 0.552354
rbfA CT0242 ribosome-binding factor Achromosome CDS254879 363 + 0.53719
rimM CT1165 16S rRNA processing protein RimMchromosome CDS1096272 504 - 0.539683
rluD CT1299 ribosomal large subunit pseudouridine synthase Dchromosome CDS1220882 990 + 0.609091
rplA CT0152 ribosomal protein L1chromosome CDS153756 696 + 0.54454
rplB CT2186 ribosomal protein L2chromosome CDS2061909 840 - 0.528571
rplC CT2189 ribosomal protein L3chromosome CDS2063770 630 - 0.520635
rplD CT2188 ribosomal protein L4chromosome CDS2063124 627 - 0.53748
rplE CT2177 ribosomal protein L5chromosome CDS2057971 552 - 0.547101
rplF CT2174 ribosomal protein L6chromosome CDS2056652 540 - 0.564815
rplI CT2132 ribosomal protein L9chromosome CDS2018353 459 - 0.538126
rplJ CT0153 ribosomal protein L10chromosome CDS154473 522 + 0.52682
rplK CT0151 ribosomal protein L11chromosome CDS153270 426 + 0.565728
rplL CT0154 ribosomal protein L7/L12chromosome CDS155050 381 + 0.548556
rplM CT1783 ribosomal protein L13chromosome CDS1688567 453 - 0.536424
rplN CT2179 ribosomal protein L14chromosome CDS2058979 369 - 0.528455
rplO CT2170 ribosomal protein L15chromosome CDS2054893 561 - 0.54902
rplP CT2182 ribosomal protein L16chromosome CDS2059942 420 - 0.55
rplQ CT2161 ribosomal protein L17chromosome CDS2049225 474 - 0.552743
rplR CT2173 ribosomal protein L18chromosome CDS2056233 360 - 0.561111
rplS CT1163 ribosomal protein L19chromosome CDS1095102 366 - 0.560109
rplT CT2129 ribosomal protein L20chromosome CDS2016272 348 + 0.548851
rplU CT1505 ribosomal protein L21chromosome CDS1412295 288 + 0.534722
rplV CT2184 ribosomal protein L22chromosome CDS2061189 360 - 0.544444
rplW CT2187 ribosomal protein L23chromosome CDS2062779 312 - 0.50641
rplX CT2178 ribosomal protein L24chromosome CDS2058620 243 - 0.534979
rpmA CT1506 ribosomal protein L27chromosome CDS1412619 255 + 0.576471
rpmB CT1611 ribosomal protein L28chromosome CDS1518211 219 + 0.525114
rpmC CT2181 ribosomal protein L29chromosome CDS2059705 207 - 0.487923
rpmD CT2171 ribosomal protein L30chromosome CDS2055487 186 - 0.521505
rpmE CT1576 ribosomal protein L31chromosome CDS1487154 228 + 0.54386
rpmF CT2112 ribosomal protein L32chromosome CDS1999192 192 + 0.614583
rpmG CT1373 ribosomal protein L33chromosome CDS1290861 183 + 0.459016
rpmH CT0003 ribosomal protein L34chromosome CDS3285 162 + 0.506173
rpmI CT2128 ribosomal protein L35chromosome CDS2016045 195 + 0.528205
rpmJ CT2166 ribosomal protein L36chromosome CDS2052254 117 - 0.435897
rpsA CT0288 ribosomal protein S1chromosome CDS298676 1653 + 0.560799
rpsB CT1781 ribosomal protein S2chromosome CDS1687274 750 - 0.569333
rpsC CT2183 ribosomal protein S3chromosome CDS2060412 762 - 0.555118
rpsD CT2163 ribosomal protein S4chromosome CDS2050762 612 - 0.531046
rpsE CT2172 ribosomal protein S5chromosome CDS2055691 519 - 0.529865
rpsF CT2135 ribosomal protein S6chromosome CDS2019739 396 - 0.530303
rpsG CT2193 ribosomal protein S7chromosome CDS2068213 471 - 0.562633
rpsH CT2175 ribosomal protein S8chromosome CDS2057221 396 - 0.502525
rpsI CT1782 ribosomal protein S9chromosome CDS1688162 390 - 0.579487
rpsJ CT2190 ribosomal protein S10chromosome CDS2064434 312 - 0.474359
rpsK CT2164 ribosomal protein S11chromosome CDS2051410 384 - 0.536458
rpsL CT2194 ribosomal protein S12chromosome CDS2068708 399 - 0.546366
rpsM CT2165 ribosomal protein S13chromosome CDS2051841 378 - 0.52381
rpsN CT2176 ribosomal protein S14chromosome CDS2057682 270 - 0.551852
rpsO CT0245 ribosomal protein S15chromosome CDS257032 270 + 0.522222
rpsP CT1166 ribosomal protein S16chromosome CDS1096809 405 - 0.582716
rpsQ CT2180 ribosomal protein S17chromosome CDS2059382 270 - 0.522222
rpsR CT2133 ribosomal protein S18chromosome CDS2018858 225 - 0.475556
rpsS CT2185 ribosomal protein S19chromosome CDS2061579 297 - 0.515152
rpsT CT0261 ribosomal protein S20chromosome CDS271656 279 + 0.530466
rpsU CT1919 ribosomal protein S21chromosome CDS1814914 198 - 0.479798
rsuA CT0479 ribosomal small subunit pseudouridine synthase Achromosome CDS493940 744 + 0.596774
serS CT0606 seryl-tRNA synthetasechromosome CDS608846 1284 - 0.601246
spoU CT0879 tRNA methyltransferase SpoUchromosome CDS833971 690 - 0.585507
sun CT0603 sun proteinchromosome CDS604791 1287 - 0.640249
tgt CT1397 tRNA-guanine transglycosylasechromosome CDS1310189 1134 + 0.590829
thrS CT2126 threonyl-tRNA synthetasechromosome CDS2013356 1974 + 0.606383
trmD CT1164 tRNA (Guanine-N1)-methyltransferasechromosome CDS1095495 693 - 0.554113
trmU CT1855 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1754744 1101 + 0.613079
trpS CT0013 tryptophanyl-tRNA synthetasechromosome CDS11570 1035 + 0.590338
truA CT0978 tRNA pseudouridine synthase Achromosome CDS925437 744 + 0.616935
truB CT0243 tRNA pseudouridine synthase Bchromosome CDS255270 723 + 0.568465
tsf CT1780 translation elongation factor TSchromosome CDS1686322 867 - 0.543253
tuf CT2191 translation elongation factor TUchromosome CDS2064824 1182 - 0.552453
tyrS CT0563 tyrosyl-tRNA synthetasechromosome CDS570484 1221 - 0.584767
valS CT1552 valyl-tRNA synthetasechromosome CDS1460314 2706 - 0.599778