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2024-05-17 16:24:02

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720

Number of genes found: 192

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Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
STM0080 putative outer membrane lipoproteinSubName: Full=Putative outer membrane lipoprotein; chromosome CDS93607 231 + 0.484848
STM0926 putative Fels-1 prophage minor tail proteinSubName: Full=Putative Fels-1 prophage minor tail protein; chromosome CDS999070 2373 + 0.582385
STM1548 putativeS-adenosylmethionine:tRNA-ribosyltransfe rase-isomeraseSubName: Full=Putative S-adenosylmethionine:tRNA-ribosyltransferase-isomerase; chromosome CDS1624913 1041 + 0.386167
STM1549 putative translation initiation inhibitorSubName: Full=Putative translation initiation inhibitor; chromosome CDS1626005 390 - 0.497436
STM1550 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS1626565 285 - 0.421053
STM1873 putative periplasmic or exported proteinSubName: Full=Putative periplasmic or exported protein; chromosome CDS1968296 354 - 0.533898
STM2133 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS2225846 885 + 0.500565
STM2534 putative cytoplasmic proteinSubName: Full=Putative cytoplasmic protein; chromosome CDS2673995 669 + 0.446936
STM2545 putative rRNA methylaseRecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; chromosome CDS2683585 732 - 0.568306
STM2566 putative periplasmic proteinSubName: Full=Putative periplasmic protein; chromosome CDS2712163 234 + 0.461538
STM3521 putative ribonucleoprotein related-proteinSubName: Full=Putative ribonucleoprotein related-protein; chromosome CDS3683125 1554 - 0.60296
STM3598 putative L-asparaginaseSubName: Full=Putative L-asparaginase; EC=1.8.1.7; EC=3.5.1.1; chromosome CDS3769992 1044 - 0.51341
STM4450 putative inner membrane proteinSubName: Full=Putative inner membrane protein; chromosome CDS4691680 285 + 0.470175
alaS alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS2971371 2631 - 0.549221
ansA cytoplasmic L-asparaginase ISubName: Full=Cytoplasmic L-asparaginase I; EC=3.5.1.1; chromosome CDS1371798 1017 - 0.528024
ansB periplasmic L-asparaginase IISubName: Full=Periplasmic L-asparaginase II; EC=3.5.1.1; chromosome CDS3265481 1047 - 0.526266
argS arginine tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS2002597 1734 + 0.551903
asnS asparagine tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS1091479 1401 - 0.551035
aspS aspartate tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS1995111 1773 - 0.566272
cafA RNase GSubName: Full=RNase G; EC=3.1.4.-; chromosome CDS3539847 1470 - 0.527211
cca tRNA nucleotidyl transferaseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS3369221 1242 + 0.586151
cysS cysteine tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS599135 1386 + 0.549062
dbpA ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1748288 1374 - 0.55313
deaD cysteine sulfinate desulfinaseRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS3446185 1941 - 0.579083
def peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS3576936 510 + 0.511765
efp elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4579610 567 + 0.522046
fmt 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS3577461 948 + 0.548523
frr ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS257148 558 + 0.510753
ftsJ 23S rRNA methyltransferaseRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS3466728 627 - 0.515152
fusA protein chain elongation factor EF-GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS3599558 2115 - 0.516785
glnS glutamine tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS747421 1668 + 0.534173
gltX glutamate tRNA synthetase, catalytic subunitRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2530163 1416 - 0.552966
glyQ glycine tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS3841849 912 - 0.558114
glyS glycine tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS3839770 2070 - 0.570048
gshB glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; chromosome CDS3256939 948 + 0.545359
hemK putative protoporphyrinogen oxidaseRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS1872498 834 - 0.58753
hisS histidine tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS2654871 1275 - 0.562353
ileS isoleucine tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS53855 2835 + 0.547795
infA protein chain initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS1030347 219 - 0.488584
infB protein chain initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS3453610 2679 - 0.554311
infC protein chain initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS1414242 435 + 0.473563
ksgA S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase; kasugamycin resistanceRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS102663 822 - 0.524331
lasT putative tRNA/tRNA methyltransferaseSubName: Full=Putative tRNA/tRNA methyltransferase; EC=2.1.1.-; chromosome CDS4856722 687 + 0.525473
leuS leucine tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS709125 2583 - 0.557878
ligT 2'-5' RNA ligaseSubName: Full=2-5 RNA ligase; EC=6.5.1.-; chromosome CDS217751 531 - 0.629002
lysS constitutive lysine tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS3199219 1518 - 0.540843
map methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS253052 795 - 0.524528
miaA delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS4603542 951 + 0.543638
miaB methylthiolation of isopentenylated A37 derivatives in rRNARecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS734487 1425 - 0.538947
miaE hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNARecName: Full=tRNA-(ms[2]io[6]A)-hydroxylase; EC=1.-.-.-; chromosome CDS4713345 813 + 0.543665
pcnB poly(A) polymerase IRecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; chromosome CDS213874 1419 - 0.561663
pheS phenylalanine tRNA synthetase, alpha-subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1415678 984 + 0.538618
pnp polynucleotide phosphorylaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS3449247 2136 - 0.562734
prfA peptide chain release factor RF-1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS1873331 1083 - 0.575254
prfB peptide chain release factor RF-2RecName: Full=Peptide chain release factor 2; Short=RF-2; chromosome CDS3200746 882 - 0.544218
prfC peptide chain release factor RF-3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS4813888 1590 + 0.543396
prfH putative peptide chain release factorSubName: Full=Putative peptide chain release factor; chromosome CDS360203 615 + 0.55122
prmA methylation of 50S ribosomal subunit protein L11RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS3553729 882 + 0.558957
proS proline tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS282467 1719 - 0.547411
pth peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1881093 609 + 0.512315
queA S-adenosylmethionine-tRNAribosyltransferase-isomeraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS459560 1065 + 0.558685
rbfA ribosome-binding factorRecName: Full=Ribosome-binding factor A; chromosome CDS3452988 402 - 0.529851
rfbF glucose-1-phosphate cytidylyltransferaseRecName: Full=Glucose-1-phosphate cytidylyltransferase; EC=2.7.7.33; AltName: Full=CDP-glucose pyrophosphorylase; chromosome CDS2173350 774 - 0.435401
rhlB putative helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS4123427 1266 - 0.547393
rhlE putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS885586 1365 + 0.58315
rimJ acetylation of N-terminal alanine of 30S ribosomal subunit protein S5SubName: Full=Acetylation of N-terminal alanine of 30S ribosomal subunit protein S5; EC=2.3.1.128; chromosome CDS1252507 585 + 0.511111
rimK ribosomal protein S6 modification proteinRecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Poly-alpha-glutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; chromosome CDS946561 903 + 0.563677
rimL acetyl transferaseSubName: Full=Acetyl transferase; EC=2.3.1.-; chromosome CDS1701042 540 - 0.503704
rimM 16S rRNA processing proteinRecName: Full=Ribosome maturation factor RimM; chromosome CDS2816073 549 - 0.500911
rluA 23S rRNA pseudouridylate 746 synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase A; EC=5.4.99.28; EC=5.4.99.29; AltName: Full=23S rRNA pseudouridine(746) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; AltName: Full=tRNA pseudouridine(32) synthase; chromosome CDS109331 660 - 0.571212
rluC 23S rRNA pseudouridylate synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase C; EC=5.4.99.24; AltName: Full=23S rRNA pseudouridine(955/2504/2580) synthase; AltName: Full=rRNA pseudouridylate synthase C; AltName: Full=rRNA-uridine isomerase C; chromosome CDS1272131 960 + 0.553125
rluD pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; chromosome CDS2805547 981 - 0.53211
rmf ribosome modulation factor (involved in dimerization of 70S ribosomes)RecName: Full=Ribosome modulation factor; Short=RMF; chromosome CDS1157641 168 + 0.535714
rna RNase I, cleaves phosphodiester bond between any two nucleotidesSubName: Full=RNase I; EC=3.1.27.6; chromosome CDS679989 807 - 0.547708
rnd RNase DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1914022 1128 - 0.550532
rne RNase ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS1268354 3204 - 0.58427
rnpA RNase PRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS4045842 360 + 0.561111
rph RNase PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome CDS3926679 717 - 0.549512
rplA 50S ribosomal subunit protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS4363537 705 + 0.531915
rplB 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS3593803 822 - 0.53163
rplC 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS3595557 630 - 0.51746
rplD 50S ribosomal subunit protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS3594941 606 - 0.531353
rplE 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS3590160 540 - 0.494444
rplF 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS3588868 534 - 0.516854
rplI 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS4631504 450 + 0.508889
rplJ 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS4364661 498 + 0.52008
rplK 50 S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS4363105 429 + 0.526807
rplL 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; AltName: Full=L8; chromosome CDS4365225 366 + 0.461749
rplM 50S ribosomal subunit protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS3512814 429 - 0.512821
rplN 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS3591039 372 - 0.5
rplO 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS3587366 435 - 0.544828
rplP 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS3592019 411 - 0.523114
rplQ 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS3582877 384 - 0.544271
rplR 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS3588505 354 - 0.531073
rplS 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS2814873 348 - 0.485632
rplT 50S ribosomal subunit protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS1415020 357 + 0.498599
rplU 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS3472778 312 - 0.490385
rplV 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS3593161 333 - 0.501502
rplW 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS3594642 303 - 0.491749
rplX 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS3590714 315 - 0.460317
rplY 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS2326433 285 + 0.512281
rpmA 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS3472501 258 - 0.496124
rpmB 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS3922226 237 - 0.518987
rpmC 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS3591828 192 - 0.53125
rpmD 50S ribosomal subunit protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS3587804 180 - 0.505556
rpmE 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS4305763 213 + 0.488263
rpmE2 putative 50S ribosomal protein L31 (second copy)RecName: Full=50S ribosomal protein L31 type B; chromosome CDS526352 261 + 0.440613
rpmF 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1275846 174 + 0.528736
rpmG 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS3922038 168 - 0.39881
rpmH 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS4045685 141 + 0.524823
rpmI 50S ribosomal subunit protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS1414772 198 + 0.489899
rpmJ 50S ribosomal subunit protein XRecName: Full=50S ribosomal protein L36; chromosome CDS3585879 117 - 0.478632
rpmJ2 putative 50S ribosomal protein L36 (second copy)RecName: Full=50S ribosomal protein L36 2; chromosome CDS526618 141 + 0.432624
rpsA 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS1065791 1674 + 0.510155
rpsB 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS254297 726 + 0.509642
rpsC 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS3592442 702 - 0.511396
rpsD 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS3584316 621 - 0.512077
rpsE 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS3587987 504 - 0.505952
rpsF 30S ribosomal subunit protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS4630514 396 + 0.530303
rpsG 30S ribosomal subunit protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS3601769 471 - 0.496815
rpsH 30S ribosomal subunit protein S8, and regulatorRecName: Full=30S ribosomal protein S8; chromosome CDS3589414 393 - 0.501272
rpsI 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS3512406 393 - 0.531807
rpsJ 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS3596219 312 - 0.548077
rpsK 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS3584970 390 - 0.515385
rpsL 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS3602335 375 - 0.528
rpsM 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS3585376 357 - 0.52381
rpsN 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS3589840 306 - 0.522876
rpsO 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS3451624 270 - 0.5
rpsP 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS2816640 249 - 0.522088
rpsQ 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS3591574 255 - 0.478431
rpsR 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS4631235 228 + 0.52193
rpsS 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS3593508 279 - 0.491039
rpsT 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS52280 264 - 0.465909
rpsU 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS3374055 216 + 0.518519
rsmC 16S ribosomal rRNARecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS4811138 1029 - 0.5724
rsuA 16S rRNA pseudouridylate 516 synthaseRecName: Full=Ribosomal small subunit pseudouridine synthase A; EC=5.4.99.19; AltName: Full=16S pseudouridylate 516 synthase; AltName: Full=16S rRNA pseudouridine(516) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; chromosome CDS2323701 696 - 0.543103
selB selenocysteinyl-tRNA-specific translation factorSubName: Full=Selenocysteinyl-tRNA-specific translation factor; chromosome CDS3870846 1851 - 0.571043
serS serine tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS1043792 1293 + 0.540603
smpA small membrane protein ARecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; chromosome CDS2825074 339 + 0.516224
speG spermidine N1-acetyltransferaseSubName: Full=Spermidine N1-acetyltransferase; EC=2.3.1.57; chromosome CDS1580710 561 - 0.481283
spoU putative tRNA/rRNA methyltransferaseSubName: Full=Putative tRNA/rRNA methyltransferase; EC=2.1.1.34; chromosome CDS3936186 690 + 0.544928
srmB ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2782903 1335 + 0.543071
stbD putative fimbriae; usherSubName: Full=Putative fimbriae usher; chromosome CDS379705 1326 - 0.521116
sun putative rRNA methylaseRecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; chromosome CDS3578460 1290 + 0.536434
tgt tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS460821 1128 + 0.524823
thrS threonine tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1412202 1929 + 0.504925
trmA tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS4346636 1101 - 0.519528
trmD tRNA (guanine-7-)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS2815261 768 - 0.540365
trmU tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS1321589 1152 - 0.539931
trpS tryptophan tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS3636247 1005 - 0.518408
trpS2 putative tryptophanyl-tRNA synthetaseSubName: Full=Putative tryptophanyl-tRNA synthetase; EC=6.1.1.2; chromosome CDS4761826 1014 - 0.529586
truA pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2480462 813 - 0.555966
truB tRNA pseudouridine 5S synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS3452044 945 - 0.555556
tsf protein chain elongation factor EF-TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS255280 852 + 0.525822
tufA protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS3598302 1185 - 0.540084
tufB protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS4360603 1185 + 0.540084
tyrS tyrosine tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS1523487 1275 + 0.528627
valS valine tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS4717013 2856 - 0.570728
yadB putative glutamyl t-RNA synthetaseRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome CDS215433 942 - 0.578556
yaeJ putative-tRNA hydrolase domainSubName: Full=Putative-tRNA hydrolase domain protein; chromosome CDS281234 423 + 0.550827
ybfE LexA regulated, putative SOS responseSubName: Full=LexA regulated, putative SOS response; chromosome CDS757809 294 - 0.527211
ybjF putative tRNA (uracil-5-)-methyltransferaseRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome CDS953113 1131 + 0.557913
ychF putative GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS1881818 1092 + 0.528388
yciH putative translation initiation factor SUI1RecName: Full=Uncharacterized protein YciH; chromosome CDS1800261 327 - 0.464832
yciL putative ribosomal large subunit pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; chromosome CDS1815804 876 - 0.568493
yciO putative translation factorSubName: Full=Putative translation factor; chromosome CDS1816780 621 - 0.52496
yeiP putative elongation factorRecName: Full=Elongation factor P-like protein; chromosome CDS2310493 804 + 0.516169
yfbG putative transformylaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS2406093 1983 + 0.541604
yfcB putative methylaseRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome CDS2495662 933 - 0.531618
yfhC putative cytosine/adenosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS2713992 552 - 0.567029
yfiA ribosome associated factorSubName: Full=Ribosome associated factor; chromosome CDS2807668 339 + 0.471976
yfiF putative tRNA/rRNA methyltransferaseSubName: Full=Putative tRNA/rRNA methyltransferase; EC=2.1.1.-; chromosome CDS2787413 1038 - 0.569364
ygcA putative RNA methyltransferaseRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS3105166 1296 - 0.543981
ygjO putative methyltransferaseRecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; chromosome CDS3388354 1137 - 0.537379
yhbH putative sigma N modulation factorRecName: Full=Ribosome hibernation promoting factor; chromosome CDS3485866 288 + 0.458333
yhbY putative RNA-binding proteinSubName: Full=Putative RNA-binding protein; chromosome CDS3467442 333 + 0.471471
yhdG putative TIM-barrel enzymeRecName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-; chromosome CDS3555271 966 + 0.536232
yhjN putative cellulose synthaseRecName: Full=Cyclic di-GMP-binding protein; AltName: Full=Cellulose synthase regulatory subunit; Flags: Precursor; chromosome CDS3798531 2301 - 0.568883
yibK putative tRNA/rRNA methyltransferaseRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS3889591 474 + 0.563291
yihZ D-Tyr-tRNA(Tyr) deacylaseRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS4238211 438 + 0.563927
yjbC putative pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase F; EC=5.4.99.-; AltName: Full=23S rRNA pseudouridine(2604) synthase; AltName: Full=rRNA pseudouridylate synthase F; AltName: Full=rRNA-uridine isomerase F; chromosome CDS4415479 870 + 0.503448
yjbN putative TIM-barrel enzymeRecName: Full=tRNA-dihydrouridine synthase A; EC=1.-.-.-; chromosome CDS4463960 999 + 0.555556
yjeA putative pyruvate oxidaseRecName: Full=Elongation factor P--(R)-beta-lysine ligase; Short=EF-P--(R)-beta-lysine ligase; EC=6.3.1.-; AltName: Full=EF-P post-translational modification enzyme A; AltName: Full=EF-P-lysine lysyltransferase; chromosome CDS4586095 978 + 0.537832
yjfH putative tRNA/rRNA methyltransferaseRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS4613593 732 + 0.575137
yjgF putative translation initiation inhibitorRecName: Full=2-iminobutanoate/2-iminopropanoate deaminase; EC=3.5.99.10; AltName: Full=Enamine/imine deaminase; chromosome CDS4703033 387 - 0.54522
yliG putative Fe-S oxidoreductases family 1RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS923529 1326 - 0.541478
ymfC putative ribosomal large subunit pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase E; EC=5.4.99.20; AltName: Full=rRNA pseudouridylate synthase E; AltName: Full=rRNA-uridine isomerase E; chromosome CDS1323548 666 - 0.528529
yoaB putative translation initiation inhibitorSubName: Full=Putative translation initiation inhibitor; chromosome CDS1920559 345 + 0.510145
yohI putative nitrogen regulation proteinRecName: Full=tRNA-dihydrouridine synthase C; EC=1.-.-.-; chromosome CDS2270724 939 - 0.57295
yqcB putative synthaseRecName: Full=tRNA pseudouridine synthase C; EC=5.4.99.26; AltName: Full=tRNA pseudouridine(65) synthase; AltName: Full=tRNA pseudouridylate synthase C; AltName: Full=tRNA-uridine isomerase C; chromosome CDS3115544 783 - 0.583653
yrdC putative translation factorRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS3574089 573 - 0.535777
yrfH heat shock proteinRecName: Full=Heat shock protein 15; chromosome CDS3653063 402 + 0.562189