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2024-05-17 07:50:16

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Escherichia coli K12, K-12

Number of genes found: 185

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Escherichia coli K12, K-12
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA b0362 orf, hypothetical protein chromosome CDS381728 387 - 0.45478
alaS b2697 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS2817403 2631 - 0.536298
ansA b1767 cytoplasmic L-asparaginase IRecName: Full=L-asparaginase 1; EC=3.5.1.1; AltName: Full=L-asparaginase I; Short=L-ASNase I; AltName: Full=L-asparagine amidohydrolase I; chromosome CDS1848884 1017 + 0.511308
ansB b2957 periplasmic L-asparaginase IIRecName: Full=L-asparaginase 2; EC=3.5.1.1; AltName: Full=L-asparaginase II; Short=L-ASNase II; AltName: Full=L-asparagine amidohydrolase II; AltName: INN=Colaspase; Flags: Precursor; chromosome CDS3097704 1047 - 0.526266
argS b1876 arginine tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS1958086 1734 + 0.532872
asnS b0930 asparagine tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS986808 1401 - 0.523911
aspS b1866 aspartate tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS1946774 1773 - 0.537507
cca b3056 tRNA nucleotidyl transferaseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS3199913 1239 + 0.56255
cysS b0526 cysteine tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS553834 1386 + 0.544733
dbpA b1343 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase DbpA; EC=3.6.4.13; chromosome CDS1407535 1374 + 0.519651
deaD b3162 inducible ATP-independent RNA helicase chromosome CDS3303993 1941 - 0.552293
def b3287 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS3431712 510 + 0.462745
dtd b3887 D-Tyr-tRNATyr deacyclaseRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS4075038 438 + 0.550228
efp b4147 elongation factor P (EF-P)RecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4373722 567 + 0.493827
flxA b1566 orf, hypothetical proteinRecName: Full=Protein FlxA; chromosome CDS1644429 333 + 0.429429
fmt b3288 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS3432236 948 + 0.528481
frr b0172 ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS192872 558 + 0.508961
fusA b3340 GTP-binding protein chain elongation factor EF-GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS3469422 2115 - 0.508274
glnS b0680 glutamine tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; chromosome CDS705316 1665 + 0.524925
gltX b2400 glutamate tRNA synthetase, catalytic subunitRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2517279 1416 - 0.525424
glyQ b3560 glycine tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS3722430 912 - 0.561404
glyS b3559 glycine tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS3720351 2070 - 0.554106
gshB b2947 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; chromosome CDS3089900 951 + 0.534175
hemK b1212 possible protoporphyrinogen oxidaseRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=M.EcoKHemKP; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein release factor methylation C; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS1265317 834 + 0.551559
hisS b2514 histidine tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS2637323 1275 - 0.547451
hslR b3400 Hsp15; DNA/RNA binding heat shock proteinRecName: Full=Heat shock protein 15; Short=HSP15; chromosome CDS3527370 402 + 0.534826
ileS b0026 isoleucine tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS22391 2817 + 0.557685
infA b0884 protein chain initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS925448 219 - 0.484018
infB b3168 protein chain initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS3311364 2673 - 0.534231
infC b1718 protein chain initiation factor IF-3RecName: Full=Translation initiation factor IF-3; Contains: RecName: Full=Translation initiation factor IF-3, N-terminally processed; Contains: RecName: Full=Translation initiation factor IF-3S; chromosome CDS1798120 543 - 0.486188
kptA b4331 2'-phosphotransferase chromosome CDS4558851 657 + 0.491629
ksgA b0051 S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=High level kasugamycin resistance protein KsgA; AltName: Full=Kasugamycin dimethyltransferase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS51609 822 - 0.530414
lasT b4403 orf, hypothetical proteinRecName: Full=Uncharacterized tRNA/rRNA methyltransferase LasT; EC=2.1.1.-; chromosome CDS4638965 687 + 0.497817
leuS b0642 leucine tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS671424 2583 - 0.533488
ligT b0147 2'-5' RNA ligase chromosome CDS161501 540 - 0.561111
lysS b2890 lysine tRNA synthetase, constitutive; suppressor of ColE1 mutation in primer RNARecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS3031679 1518 - 0.530962
lysU b4129 lysine tRNA synthetase, inducible; heat shock proteinRecName: Full=Lysine--tRNA ligase, heat inducible; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS4351223 1518 - 0.474308
map b0168 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS188712 795 - 0.504403
miaA b4171 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS4397275 951 + 0.534175
pcnB b0143 poly(A) polymerase I chromosome CDS157729 1365 - 0.561905
pheS b1714 phenylalanine tRNA synthetase, alpha-subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1795983 984 - 0.538618
pnp b3164 polynucleotide phosphorylase; cytidylate kinase activity chromosome CDS3307055 2205 - 0.536961
prfA b1211 peptide chain release factor RF-1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS1264235 1083 + 0.530009
prfB b2891 peptide chain release factor RF-2RecName: Full=Peptide chain release factor 2; Short=RF-2; chromosome CDS3033206 1099 - 0.535032
prfC b4375 peptide chain release factor RF-3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS4607437 1590 + 0.540252
prfH b0236 probable peptide chain release factor chromosome CDS253702 501 + 0.542914
prmA b3259 methylase for 50S ribosomal subunit protein L11RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS3407092 882 + 0.543084
proS b0194 proline tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Global RNA synthesis factor; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS217057 1719 - 0.545084
pth b1204 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1257152 585 - 0.497436
queA b0405 synthesis of queuine in tRNA; probably S-adenosylmethionine:tRNA ribosyltransferase-isomeraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS424235 1071 + 0.54155
rbfA b3167 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; AltName: Full=Protein P15B; chromosome CDS3310799 402 - 0.529851
relE b1563 orf, hypothetical proteinRecName: Full=mRNA interferase RelE; EC=3.1.-.-; AltName: Full=Endoribonuclease RelE; AltName: Full=Toxin RelE; chromosome CDS1643370 288 - 0.46875
rhlB b3780 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS3962388 1266 - 0.525276
rhlE b0797 putative ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS830095 1365 + 0.567033
rimJ b1066 acetylation of N-terminal alanine of 30S ribosomal subunit protein S5RecName: Full=Ribosomal-protein-alanine acetyltransferase; EC=2.3.1.128; AltName: Full=Acetylating enzyme for N-terminal of ribosomal protein S5; chromosome CDS1124785 585 + 0.494017
rimK b0852 ribosomal protein S6 modification proteinRecName: Full=Ribosomal protein S6--L-glutamate ligase; EC=6.3.2.-; AltName: Full=Polyglutamate synthase; AltName: Full=Ribosomal protein S6 modification protein; chromosome CDS891190 903 + 0.562569
rimL b1427 ribosomal-protein-serine acetyltransferaseRecName: Full=Ribosomal-protein-serine acetyltransferase; EC=2.3.1.-; AltName: Full=Acetylating enzyme for N-terminal of ribosomal protein L7/L12; chromosome CDS1496962 540 + 0.433333
rimM b2608 16S rRNA processing protein chromosome CDS2743392 558 - 0.491039
rluA b0058 Ribosomal large subunit pseudouridine synthase ARecName: Full=Ribosomal large subunit pseudouridine synthase A; EC=5.4.99.28; EC=5.4.99.29; AltName: Full=23S rRNA pseudouridine(746) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; AltName: Full=tRNA pseudouridine(32) synthase; chromosome CDS59687 660 - 0.539394
rluC b1086 Ribosomal large subunit pseudouridine synthase CRecName: Full=Ribosomal large subunit pseudouridine synthase C; EC=5.4.99.24; AltName: Full=23S rRNA pseudouridine(955/2504/2580) synthase; AltName: Full=rRNA pseudouridylate synthase C; AltName: Full=rRNA-uridine isomerase C; chromosome CDS1144163 960 + 0.514583
rluD b2594 23S rRNA pseudouridine synthaseRecName: Full=Ribosomal large subunit pseudouridine synthase D; EC=5.4.99.23; AltName: Full=23S rRNA pseudouridine(1911/1915/1917) synthase; AltName: Full=rRNA pseudouridylate synthase D; AltName: Full=rRNA-uridine isomerase D; chromosome CDS2733053 981 - 0.528033
rmf b0953 ribosome modulation factorRecName: Full=Ribosome modulation factor; Short=RMF; AltName: Full=Protein E; chromosome CDS1014938 168 + 0.541667
rna b0611 RNase I, cleaves phosphodiester bond between any two nucleotidesRecName: Full=Ribonuclease I; Short=RNase I; EC=3.1.27.6; AltName: Full=Enterobacter ribonuclease; Flags: Precursor; chromosome CDS643420 807 - 0.511772
rnd b1804 RNase D, processes tRNA precursorRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1884888 1128 - 0.54078
rne b1084 RNase E, membrane attachment, mRNA turnover, maturation 5S RNARecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS1140405 3186 - 0.556497
rng b3247 RNase G chromosome CDS3394348 1488 - 0.519489
rnpA b3704 RNase P, protein component; protein C5RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS3882516 360 + 0.558333
rph b3643 RNase PH chromosome CDS3813886 687 - 0.561863
rplA b3984 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11RecName: Full=50S ribosomal protein L1; chromosome CDS4176902 705 + 0.516312
rplB b3317 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS3448565 822 - 0.526764
rplC b3320 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS3450319 630 - 0.514286
rplD b3319 50S ribosomal subunit protein L4, regulates expression of S10 operonRecName: Full=50S ribosomal protein L4; chromosome CDS3449703 606 - 0.529703
rplE b3308 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS3444921 540 - 0.498148
rplF b3305 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS3443629 534 - 0.520599
rplI b4203 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS4424131 450 + 0.497778
rplJ b3985 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; AltName: Full=50S ribosomal protein L8; chromosome CDS4178019 498 + 0.524096
rplK b3983 50S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS4176470 429 + 0.522144
rplL b3986 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; AltName: Full=L8; chromosome CDS4178583 366 + 0.461749
rplM b3231 50S ribosomal subunit protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS3376245 429 - 0.505827
rplN b3310 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS3445800 372 - 0.510753
rplO b3301 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS3442127 435 - 0.535632
rplP b3313 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS3446781 411 - 0.518248
rplQ b3294 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS3437638 384 - 0.536458
rplR b3304 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS3443266 354 - 0.536723
rplS b2606 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS2742205 348 - 0.482759
rplT b1716 50S ribosomal subunit protein L20, and regulatorRecName: Full=50S ribosomal protein L20; chromosome CDS1797417 357 - 0.481793
rplU b3186 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS3331162 312 - 0.483974
rplV b3315 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS3447923 333 - 0.498498
rplW b3318 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS3449404 303 - 0.481848
rplX b3309 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS3445475 315 - 0.460317
rplY b2185 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS2280539 285 + 0.505263
rpmA b3185 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS3330884 258 - 0.5
rpmB b3637 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS3809461 237 - 0.531646
rpmC b3312 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS3446590 192 - 0.541667
rpmD b3302 50S ribosomal subunit protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS3442565 180 - 0.5
rpmE b3936 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS4125036 213 + 0.492958
rpmF b1089 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1146590 174 + 0.54023
rpmG b3636 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS3809273 168 - 0.404762
rpmH b3703 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS3882359 141 + 0.51773
rpmI b1717 50S ribosomal subunit protein ARecName: Full=50S ribosomal protein L35; AltName: Full=Ribosomal protein A; chromosome CDS1797826 198 - 0.5
rpmJ b3299 50S ribosomal subunit protein L36RecName: Full=50S ribosomal protein L36; AltName: Full=Ribosomal protein B; chromosome CDS3440640 117 - 0.478632
rpsA b0911 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS961218 1674 + 0.511947
rpsB b0169 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS189874 726 + 0.513774
rpsC b3314 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS3447204 702 - 0.509971
rpsD b3296 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS3439077 621 - 0.507246
rpsE b3303 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS3442748 504 - 0.501984
rpsF b4200 30S ribosomal subunit protein S6 chromosome CDS4423141 396 + 0.525253
rpsG b3341 30S ribosomal subunit protein S7, initiates assemblyRecName: Full=30S ribosomal protein S7; chromosome CDS3471564 540 - 0.501852
rpsH b3306 30S ribosomal subunit protein S8, and regulatorRecName: Full=30S ribosomal protein S8; chromosome CDS3444175 393 - 0.501272
rpsI b3230 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS3375837 393 - 0.524173
rpsJ b3321 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS3450981 312 - 0.554487
rpsK b3297 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS3439731 390 - 0.515385
rpsL b3342 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS3472200 375 - 0.533333
rpsM b3298 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS3440137 357 - 0.518207
rpsN b3307 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS3444601 306 - 0.526144
rpsO b3165 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS3309437 270 - 0.518519
rpsP b2609 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS2743959 249 - 0.514056
rpsQ b3311 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS3446336 255 - 0.47451
rpsR b4202 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS4423862 228 + 0.526316
rpsS b3316 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS3448270 279 - 0.487455
rpsT b0023 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS20815 264 - 0.465909
rpsU b3065 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS3208803 216 + 0.518519
rrmB b3289 16S rRNA m5C967 methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.176; AltName: Full=16S rRNA m5C967 methyltransferase; AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase RsmB; chromosome CDS3433229 1290 + 0.496899
rrmJ b3179 23 S rRNA methyltransferaseRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=Cell division protein FtsJ; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS3325057 630 - 0.504762
rsmC b4371 16S rRNA m2G1207 methylaseRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS4604692 1032 - 0.557171
rsuA b2183 16S pseudouridylate 516 synthaseRecName: Full=Ribosomal small subunit pseudouridine synthase A; EC=5.4.99.19; AltName: Full=16S pseudouridylate 516 synthase; AltName: Full=16S rRNA pseudouridine(516) synthase; AltName: Full=rRNA pseudouridylate synthase A; AltName: Full=rRNA-uridine isomerase A; chromosome CDS2277810 696 - 0.528736
rumA b2785 23S rRNA (uracil-5-)-methyltransferaseRecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS2911721 1302 - 0.514593
selB b3590 selenocysteinyl-tRNA-specific translation factorRecName: Full=Selenocysteine-specific elongation factor; AltName: Full=SelB translation factor; chromosome CDS3756040 1845 - 0.563686
serS b0893 serine tRNA synthetase; also charges selenocystein tRNA with serineRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS938651 1293 + 0.526682
smpA b2617 small membrane protein A chromosome CDS2751816 153 + 0.464052
speG b1584 spermidine N1-acetyltransferaseRecName: Full=Spermidine N(1)-acetyltransferase; EC=2.3.1.57; AltName: Full=Diamine acetyltransferase; AltName: Full=SAT; chromosome CDS1654208 561 + 0.468806
srmB b2576 ATP-dependent RNA helicaseRecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; chromosome CDS2710918 1335 + 0.547566
tadA b2559 tRNA-specific adenosine deaminase chromosome CDS2695376 537 - 0.541899
tdcF b3113 conserved protein chromosome CDS3257743 453 - 0.525386
tgt b0406 tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS425361 1128 + 0.513298
thrS b1719 threonine tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1798666 1929 - 0.495594
trmA b3965 tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS4160193 1101 - 0.508629
trmD b2607 tRNA methyltransferase; tRNA (guanine-7-)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS2742594 768 - 0.533854
trmH b3651 tRNA (Guanosine-2'-O-)-methyltransferaseRecName: Full=tRNA (guanosine(18)-2-O)-methyltransferase; EC=2.1.1.34; AltName: Full=tRNA [Gm18] methyltransferase; chromosome CDS3822538 690 + 0.553623
trmU b1133 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase chromosome CDS1191890 1152 - 0.534722
trpS b3384 tryptophan tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS3510656 1005 - 0.520398
truA b2318 pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; Short=PSU-I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2432846 813 - 0.553506
truB b3166 tRNA pseudouridine 5S synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=Protein p35; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS3309855 945 - 0.524868
tsf b0170 protein chain elongation factor EF-TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS190857 852 + 0.498826
tufA b3339 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu 1; Short=EF-Tu 1; AltName: Full=P-43; chromosome CDS3468167 1185 - 0.532489
tufB b3980 protein chain elongation factor EF-TuRecName: Full=Elongation factor Tu 2; Short=EF-Tu 2; AltName: Full=P-43; chromosome CDS4173967 1185 + 0.534177
tyrS b1637 tyrosine tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS1713972 1275 - 0.515294
valS b4258 valine tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS4479005 2856 - 0.545868
yadB b0144 putative tRNA synthetase chromosome CDS159186 927 - 0.536138
yaeJ b0191 orf, hypothetical proteinRecName: Full=Peptidyl-tRNA hydrolase ArfB; Short=PTH; EC=3.1.1.29; AltName: Full=Alternative ribosome-rescue factor B; chromosome CDS214833 423 + 0.541371
ybfP b0689 putative pectinaseRecName: Full=Uncharacterized lipoprotein YbfP; Flags: Precursor; chromosome CDS714635 495 + 0.454545
ybjF b0859 putative enzymeRecName: Full=23S rRNA (uracil(747)-C(5))-methyltransferase RlmC; EC=2.1.1.189; AltName: Full=23S rRNA(m5U747)-methyltransferase; chromosome CDS897741 1128 + 0.546099
ycdK b1010 hypothetical proteinRecName: Full=Putative aminoacrylate peracid reductase RutC; EC=1.-.-.-; chromosome CDS1070996 387 - 0.540052
ychF b1203 putative GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS1255944 1092 - 0.510073
yciH b1282 orf, hypothetical protein chromosome CDS1340679 330 + 0.49697
yciL b1269 orf, hypothetical proteinRecName: Full=Ribosomal large subunit pseudouridine synthase B; EC=5.4.99.22; AltName: Full=23S rRNA pseudouridine(2605) synthase; AltName: Full=rRNA pseudouridylate synthase B; AltName: Full=rRNA-uridine isomerase B; chromosome CDS1324876 876 + 0.537671
yciO b1267 orf, hypothetical protein chromosome CDS1322086 657 + 0.484018
yebU b1835 orf, hypothetical protein chromosome CDS1918241 1446 + 0.517981
yeiP b2171 putative elongation factor chromosome CDS2263217 828 + 0.506039
yfbG b2255 putative transformylaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; AltName: Full=Polymyxin resistance protein PmrI; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS2366061 1983 + 0.511346
yfcB b2330 putative adenine-specific methylase chromosome CDS2445530 1266 - 0.512638
yfhQ b2532 hypothetical tRNA/rRNA methyltransferaseRecName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.200; AltName: Full=tRNA (cytidine(32)/uridine(32)-2-O)-methyltransferase; AltName: Full=tRNA Cm32/Um32 methyltransferase; chromosome CDS2660605 741 - 0.554656
yfiA b2597 putative yhbH sigma 54 modulatorRecName: Full=Ribosome-associated inhibitor A; AltName: Full=Protein Y; AltName: Full=SpotY; Short=pY; chromosome CDS2735176 342 + 0.461988
yfiF b2581 orf, hypothetical proteinRecName: Full=Uncharacterized tRNA/rRNA methyltransferase YfiF; EC=2.1.1.-; chromosome CDS2715513 1038 - 0.56262
ygjO b3084 putative enzyme chromosome CDS3232761 1167 - 0.535561
yhbH b3203 probable sigma-54 modulation proteinRecName: Full=Ribosome hibernation promoting factor; chromosome CDS3344195 288 + 0.447917
yhbY b3180 orf, hypothetical proteinRecName: Full=RNA-binding protein YhbY; chromosome CDS3325812 294 + 0.486395
yhdG b3260 putative dehydrogenaseRecName: Full=tRNA-dihydrouridine synthase B; EC=1.-.-.-; chromosome CDS3408302 966 + 0.522774
yibK b3606 orf, hypothetical proteinRecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS3779238 474 + 0.550633
yjbC b4022 orf, hypothetical proteinRecName: Full=Ribosomal large subunit pseudouridine synthase F; EC=5.4.99.21; AltName: Full=23S rRNA pseudouridine(2604) synthase; AltName: Full=rRNA pseudouridylate synthase F; AltName: Full=rRNA-uridine isomerase F; chromosome CDS4228377 873 + 0.515464
yjbN b4049 orf, hypothetical protein chromosome CDS4259692 1038 + 0.536609
yjeA b4155 putative lysyl-tRNA synthetase chromosome CDS4380636 1008 + 0.522817
yjeJ b4145 orf, hypothetical proteinRecName: Full=Uncharacterized protein YjeJ; chromosome CDS4371388 870 - 0.451724
yjfH b4180 orf, hypothetical proteinRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS4407298 732 + 0.562842
yjgF b4243 orf, hypothetical protein chromosome CDS4468550 426 - 0.516432
yjgH b4248 orf, hypothetical proteinRecName: Full=RutC family protein YjgH; chromosome CDS4470837 396 - 0.472222
ykgM b0296 putative ribosomal proteinRecName: Full=50S ribosomal protein L31 type B; chromosome CDS311738 264 - 0.458333
yleA b0661 orf, hypothetical proteinRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS692754 1425 - 0.541754
yliG b0835 orf, hypothetical proteinRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS875933 1326 - 0.526395
ymfC b1135 orf, hypothetical protein chromosome CDS1193521 624 - 0.519231
ymjA b1295 orf, hypothetical proteinRecName: Full=Uncharacterized protein YmjA; chromosome CDS1355447 246 - 0.48374
yoaB b1809 orf, hypothetical protein chromosome CDS1891343 393 + 0.503817
yohI b2140 putative regulator proteinRecName: Full=tRNA-dihydrouridine synthase C; EC=1.-.-.-; chromosome CDS2227460 948 - 0.542194
yqcB b2791 orf, hypothetical proteinRecName: Full=tRNA pseudouridine synthase C; EC=5.4.99.26; AltName: Full=tRNA pseudouridine(65) synthase; AltName: Full=tRNA pseudouridylate synthase C; AltName: Full=tRNA-uridine isomerase C; chromosome CDS2921024 783 - 0.54023
yrdC b3282 orf, hypothetical proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=Ribosome maturation factor TsaC; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS3428865 573 - 0.521815