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2024-05-13 00:10:39

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Chlamydophila abortus S26/3, S26/3

Number of genes found: 116

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Chlamydophila abortus S26/3, S26/3
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA CAB512 conserved hypothetical proteinRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS589717 1383 - 0.373102
NA CAB046 putative elongation factorRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS56036 849 - 0.398115
NA CAB806 putative cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS935046 1431 + 0.407407
NA CAB807 putative lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS936473 1581 - 0.401645
NA CAB188 putative elongation factorRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS206041 2085 + 0.416787
NA CAB044 putative ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS54754 543 - 0.373849
NA CAB559 putative queuine tRNA-ribosyltransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS635042 1119 + 0.424486
NA CAB728 putative cytidine/deoxycytidylate deaminase family proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS839243 474 - 0.405063
NA CAB081 putative rRNA methylaseRecName: Full=Putative tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase; chromosome CDS97712 471 + 0.426752
NA CAB849 putative RNA methyltransferaseSubName: Full=Putative RNA methyltransferase; chromosome CDS986480 1206 + 0.397181
NA CAB957 conserved membrane proteinSubName: Full=Conserved membrane protein; chromosome CDS1117482 798 - 0.413534
NA CAB152 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS162167 684 - 0.396199
NA CAB669 putative translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS778848 222 - 0.418919
NA CAB629 conserved hypothetical proteinRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS721153 852 - 0.407277
NA CAB011 putative 30s ribosomal protein s4RecName: Full=30S ribosomal protein S4; chromosome CDS17032 630 + 0.390476
NA CAB498 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS576242 888 + 0.421171
NA CAB804 putative ribonuclease P protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS933208 420 + 0.402381
NA CAB186 putative 30S ribosomal protein s12RecName: Full=30S ribosomal protein S12; chromosome CDS205111 372 + 0.47043
NA CAB210 putative rRNA methylase; 4.2.3SubName: Full=Putative rRNA methylase; chromosome CDS231153 798 + 0.408521
NA CAB959 putative dihydrouridine synthaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS1121492 1020 - 0.45098
NA CAB538 putative elongation factorRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS617472 558 + 0.349462
NA CAB780 putative ribonucleaseSubName: Full=Putative ribonuclease; chromosome CDS906201 1533 + 0.382257
NA CAB842 putative alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS973518 2628 + 0.39688
NA CAB823 putative tRNA delta(2)-isopentenylpyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS953942 945 - 0.409524
NA CAB260 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS284918 1266 + 0.436019
NA CAB447 putative ATP/GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS514765 1095 + 0.409132
NA CAB758 putative poly(A) polymeraseSubName: Full=Putative poly(A) polymerase; chromosome CDS878219 1287 + 0.374514
NA CAB890 putative poly A polymeraseSubName: Full=Putative poly A polymerase; chromosome CDS1039255 1233 + 0.413625
NA CAB720 putative methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS834046 873 + 0.404353
ArgS CAB169 putative arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS180756 1689 - 0.396684
aspS CAB079 putative aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; chromosome CDS95118 1755 + 0.4
def CAB307 peptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS356666 555 + 0.401802
efp CAB839 elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS969610 573 - 0.371728
epmA CAB193 50s ribosomal protein l27RecName: Full=50S ribosomal protein L27; chromosome CDS211420 249 + 0.449799
fmt CAB091 putative methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS105985 966 + 0.426501
gatA CAB286 glutamyl-tRNA amidotransferase subunit ARecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome CDS332223 1476 + 0.432927
gatB CAB287 aspartyl/glutamyl-tRNA amidotransferase subunit BRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS333698 1464 + 0.422814
gatC CAB285 glutamyl-tRNA amidotransferase subunit CRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; chromosome CDS331899 303 + 0.39934
gltX CAB179 putative glutamyl-trna synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS196465 1518 + 0.440053
glyQ CAB792 glycyl-tRNA synthetase alpha chainSubName: Full=Glycyl-tRNA synthetase alpha chain; EC=6.1.1.14; chromosome CDS919393 3018 + 0.409874
hisS CAB078 putative histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS93851 1293 + 0.422274
ileS CAB634 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS726872 3132 - 0.399425
infB CAB451 translation initiation factorRecName: Full=Translation initiation factor IF-2; chromosome CDS517852 2625 - 0.392762
infC CAB739 initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS852540 543 - 0.399632
ksgA CAB300 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS349533 837 + 0.422939
leuS CAB585 putative leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS665009 2463 - 0.425091
metG CAB622 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS714696 1656 - 0.402174
pheS CAB736 phenylalanyl-tRNA synthetase alpha chainRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS850946 1026 - 0.409357
pnpA CAB730 polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS840274 2085 + 0.410072
prfA CAB630 peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS721982 1086 - 0.42081
prfB CAB163 putative peptide chain release factor 2RecName: Full=Peptide chain release factor 2; Short=RF-2; chromosome CDS173622 1108 + 0.430505
proS CAB240 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS259591 1734 - 0.435986
pth CAB788 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS915463 552 - 0.429348
rbfA CAB450 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS517483 363 - 0.338843
rluB CAB871 putative 16S pseudouridine synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1015218 699 - 0.426323
rluC CAB379 ribosomal large subunit pseudouridine synthase CRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS436706 825 - 0.429091
rluD CAB023 putative pseudouridine synthaseSubName: Full=Putative pseudouridine synthase; chromosome CDS32396 978 - 0.382413
rplA CAB664 putative 50S ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS775257 699 - 0.420601
rplB CAB096 putative 50S ribosomal protein l2RecName: Full=50S ribosomal protein L2; chromosome CDS110058 855 + 0.418713
rplC CAB093 putative 50s ribosomal proteinRecName: Full=50S ribosomal protein L3; chromosome CDS108328 666 + 0.40991
rplD CAB094 putative 50S ribosomal protein l4RecName: Full=50S ribosomal protein L4; chromosome CDS109010 675 + 0.395556
rplE CAB104 putative 50S ribosomal protein l5RecName: Full=50S ribosomal protein L5; chromosome CDS113891 543 + 0.403315
rplF CAB106 putative 50S ribosomal protein l6RecName: Full=50S ribosomal protein L6; chromosome CDS114885 552 + 0.407609
rplI CAB785 50S ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS914227 519 - 0.393064
rplJ CAB663 putative 50S ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS774731 513 - 0.385965
rplK CAB665 putative 50S ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS775978 426 - 0.399061
rplL CAB662 putative 50S ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS774294 405 - 0.395062
rplM CAB518 50s ribosomal protein l13RecName: Full=50S ribosomal protein L13; chromosome CDS595365 453 + 0.388521
rplN CAB102 putative 50S ribosomal protein l14RecName: Full=50S ribosomal protein L14; chromosome CDS113165 369 + 0.390244
rplO CAB109 putative 50S ribosomal protein l15RecName: Full=50S ribosomal protein L15; chromosome CDS116336 435 + 0.416092
rplP CAB100 putative 50S ribosomal protein l16RecName: Full=50S ribosomal protein L16; chromosome CDS112248 414 + 0.42029
rplQ CAB114 putative 50s ribosomal protein l17RecName: Full=50S ribosomal protein L17; chromosome CDS120171 429 + 0.370629
rplR CAB107 putative 50s ribosomal protein l18RecName: Full=50S ribosomal protein L18; chromosome CDS115459 372 + 0.413978
rplS CAB626 50S ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS717957 369 - 0.417344
rplT CAB737 50S ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS851984 363 - 0.424242
rplU CAB192 putative 50s ribosomal protein l21RecName: Full=50S ribosomal protein L21; chromosome CDS211069 321 + 0.364486
rplV CAB098 putative 50S ribosomal protein l22RecName: Full=50S ribosomal protein L22; chromosome CDS111203 336 + 0.449405
rplW CAB095 putative 50S ribosomal protein l23RecName: Full=50S ribosomal protein L23; chromosome CDS109701 336 + 0.392857
rplX CAB103 putative 50S ribosomal protein l24RecName: Full=50S ribosomal protein L24; chromosome CDS113548 342 + 0.377193
rplY CAB789 putative 50S ribosomal protein L25RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS916023 558 - 0.390681
rpmB CAB441 50s ribosomal protein l28RecName: Full=50S ribosomal protein L28; chromosome CDS507443 270 - 0.4
rpmC CAB100A 50s ribosomal protein l29RecName: Full=50S ribosomal protein L29; chromosome CDS112668 219 + 0.365297
rpmE CAB631 50S ribosomal protein L31 type BRecName: Full=50S ribosomal protein L31 type B; chromosome CDS723455 327 - 0.40367
rpmF CAB778 50S ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS905234 183 - 0.409836
rpmG CAB513 50s ribosomal protein l33RecName: Full=50S ribosomal protein L33; chromosome CDS591198 159 + 0.308176
rpmI CAB738 50S ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS852368 195 - 0.415385
rpmJ CAB803 ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS932656 138 - 0.405797
rpsA CAB453 30s ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS521861 1746 - 0.373425
rpsB CAB047 putative 30s ribosomal protein s2RecName: Full=30S ribosomal protein S2; chromosome CDS56884 831 - 0.369434
rpsC CAB099 30S ribosomal protein s3RecName: Full=30S ribosomal protein S3; chromosome CDS111547 672 + 0.425595
rpsE CAB108 putative 30S ribosomal protein s5RecName: Full=30S ribosomal protein S5; chromosome CDS115846 498 + 0.409639
rpsF CAB787 putative 30S ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS915047 339 - 0.380531
rpsG CAB187 30s ribosomal protein s7RecName: Full=30S ribosomal protein S7; chromosome CDS205526 474 + 0.419831
rpsH CAB105 putative 30S ribosomal protein s8RecName: Full=30S ribosomal protein S8; chromosome CDS114452 402 + 0.395522
rpsI CAB519 30s ribosomal protein s9RecName: Full=30S ribosomal protein S9; chromosome CDS595831 402 + 0.365672
rpsJ CAB189 30S ribosomal protein s10RecName: Full=30S ribosomal protein S10; chromosome CDS208112 339 + 0.383481
rpsK CAB112 putative 30s ribosomal protein s11RecName: Full=30S ribosomal protein S11; chromosome CDS118613 399 + 0.453634
rpsM CAB111 putative 30s ribosomal protein s13RecName: Full=30S ribosomal protein S13; chromosome CDS118224 369 + 0.422764
rpsN CAB802 30S ribosomal protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS932325 306 - 0.408497
rpsO CAB729 30S ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS839957 270 + 0.325926
rpsP CAB627A 30s ribosomal protein s16RecName: Full=30S ribosomal protein S16; chromosome CDS719433 360 - 0.413889
rpsQ CAB101 putative 30S ribosomal protein s17RecName: Full=30S ribosomal protein S17; chromosome CDS112879 252 + 0.388889
rpsR CAB786 30S ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS914766 264 - 0.356061
rpsS CAB097 putative 30S ribosomal protein s19RecName: Full=30S ribosomal protein S19; chromosome CDS110918 267 + 0.363296
rpsT CAB973 30s ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS1135184 297 + 0.383838
rpsU CAB317 30s ribosomal protein s21RecName: Full=30S ribosomal protein S21; chromosome CDS370125 177 + 0.412429
serS CAB865 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS1008845 1275 + 0.410196
thrS CAB926 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS1080854 1908 + 0.417715
trmD CAB627 putative tRNA(guanine-N(1)-)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS718350 1068 - 0.423221
trmU CAB345 tRNA-methyltransferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS398427 1089 + 0.426079
trpS CAB930 putative tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS1084885 1038 + 0.417148
truA CAB159 putative tRNA pseudouridine synthase aRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS170600 807 - 0.425031
truB CAB449 tRNA pseudouridine synthase BRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS516735 708 - 0.388418
tuF CAB668 putative elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS777471 1185 - 0.428692
tyrS CAB417 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS478968 1239 + 0.410815
valS CAB648 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS752791 2823 - 0.40418