Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Organism: Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343
Number of genes found: 184
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Bacteroides fragilis NCTC 9343, ATCC 25285 = NCTC 9343 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | BF0938 | putative tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase 2; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase 2; Short=DMAPP:tRNA dimethylallyltransferase 2; Short=DMATase 2; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase 2; Short=IPP transferase 2; Short=IPPT 2; Short=IPTase 2; | chromosome | CDS | 1173154 | 921 | - | 0.457112 |
| NA | BF3636 | putative elongation factor G | SubName: Full=Putative elongation factor G; | chromosome | CDS | 4291801 | 2157 | - | 0.476124 |
| NA | BF2726 | putative peptide chain release factor | SubName: Full=Putative peptide chain release factor; | chromosome | CDS | 3173249 | 621 | - | 0.484702 |
| NA | BF3776 | putative tRNA methyltransferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA 3; EC=2.8.1.-; | chromosome | CDS | 4459533 | 1089 | - | 0.529844 |
| NA | BF1164 | putative ribosomal L25p family stress protein | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 1421890 | 591 | - | 0.407783 |
| NA | BF4025 | putative ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 4728521 | 192 | - | 0.34375 |
| NA | BF4152 | putative phosphoribulose/uridine kinase | SubName: Full=Putative phosphoribulose/uridine kinase; EC=6.1.1.3; | chromosome | CDS | 4887823 | 1665 | + | 0.431231 |
| NA | BF1327 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1590358 | 2574 | - | 0.413753 |
| NA | BF3309 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 3904991 | 543 | + | 0.421731 |
| NA | BF1056 | putative ribosomal large subunit pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1310211 | 1620 | - | 0.457407 |
| NA | BF2851 | conserved hypothetical translation inhibitor protein | SubName: Full=Conserved hypothetical translation inhibitor protein; | chromosome | CDS | 3313385 | 375 | - | 0.485333 |
| NA | BF2183 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 2537373 | 1452 | + | 0.473829 |
| NA | BF0069 | putative tRNA pseudouridine synthase | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 67081 | 702 | + | 0.467236 |
| NA | BF1212 | conserved hypothetical exported protein | SubName: Full=Conserved hypothetical exported protein; | chromosome | CDS | 1475297 | 468 | + | 0.482906 |
| NA | BF2309 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2705822 | 492 | + | 0.406504 |
| NA | BF2398 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2798514 | 435 | - | 0.347126 |
| NA | BF2507 | putative oxidoreductase | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 2915711 | 1299 | - | 0.384142 |
| NA | BF3109 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 3628918 | 1038 | + | 0.480732 |
| NA | BF0150 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 156456 | 933 | - | 0.4791 |
| NA | BF2108 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 2463566 | 540 | + | 0.396296 |
| NA | BF3494 | putative 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 4116999 | 543 | - | 0.458564 |
| NA | BF4077 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4799698 | 1473 | - | 0.425662 |
| NA | BF3010 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 3500585 | 2166 | + | 0.430286 |
| NA | BF0453 | putative protoporphyrinogen oxidase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 533939 | 837 | + | 0.452808 |
| NA | BF0756 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 918777 | 1548 | + | 0.413437 |
| NA | BF0556 | putative L-asparaginase I | SubName: Full=Putative L-asparaginase I; EC=3.5.1.1; | chromosome | CDS | 662870 | 1026 | - | 0.489279 |
| NA | BF0599 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 726703 | 1992 | + | 0.482932 |
| NA | BF4353 | putative TIM-barrel protein, possible dihydrouridine synthase | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 5177786 | 975 | + | 0.514872 |
| NA | BF0906 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1134814 | 426 | - | 0.389671 |
| NA | BF0907 | putative Sua5/yciO/yrdC family protein | SubName: Full=Putative Sua5/yciO/yrdC family protein; | chromosome | CDS | 1135303 | 615 | - | 0.486179 |
| NA | BF4213 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4977652 | 1659 | - | 0.423146 |
| NA | BF3675 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4340965 | 564 | - | 0.466312 |
| NA | BF2568 | putative RNA methyltransferase | SubName: Full=Putative RNA methyltransferase; | chromosome | CDS | 2994453 | 1419 | + | 0.475687 |
| NA | BF3238 | putative histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 3809735 | 1365 | - | 0.434432 |
| NA | BF3694 | putative nucleotidyltransferase | SubName: Full=Putative nucleotidyltransferase; | chromosome | CDS | 4357247 | 732 | - | 0.329235 |
| NA | BF2874 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 3339371 | 1404 | - | 0.587607 |
| NA | BF2576 | putative aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 3001142 | 855 | + | 0.449123 |
| NA | BF4365 | putative ATP/GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 5190269 | 1104 | + | 0.459239 |
| NA | BF2569 | putative RNA pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2995882 | 918 | + | 0.494553 |
| NA | BF1170 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1426141 | 417 | + | 0.366906 |
| NA | BF2853 | putative tRNA:rRNA methyltransferase | SubName: Full=Putative tRNA:rRNA methyltransferase; | chromosome | CDS | 3315783 | 741 | - | 0.454791 |
| NA | BF0134 | putative RNA helicase dead-box protein | SubName: Full=Putative RNA helicase dead-box protein; | chromosome | CDS | 140054 | 1944 | - | 0.490741 |
| NA | BF2733 | putative lipoprotein | SubName: Full=Putative lipoprotein; | chromosome | CDS | 3180926 | 1236 | - | 0.458738 |
| NA | BF2603 | putative LPS biosynthesis-related sugar-phosphate nucleotidyltransferase | SubName: Full=Putative LPS biosynthesis-related sugar-phosphate nucleotidyltransferase; | chromosome | CDS | 3028950 | 777 | - | 0.365508 |
| NA | BF4274 | putative ribosome-binding factor A | SubName: Full=Putative ribosome-binding factor A; | chromosome | CDS | 5074151 | 333 | - | 0.384384 |
| NA | BF0070 | putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 67830 | 1059 | + | 0.433428 |
| NA | BF1923 | conserved hypothetical exported protein | SubName: Full=Conserved hypothetical exported protein; | chromosome | CDS | 2242357 | 315 | + | 0.377778 |
| NA | BF0513 | putative 50S ribosomal protein | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 594597 | 354 | - | 0.420904 |
| NA | BF0174 | putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA 1; EC=2.8.1.-; | chromosome | CDS | 190264 | 1095 | + | 0.423744 |
| NA | BF2117 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2470469 | 288 | - | 0.371528 |
| NA | BF3442 | putative polyA polymerase | SubName: Full=Putative polyA polymerase; | chromosome | CDS | 4063161 | 1446 | - | 0.471646 |
| NA | BF0219 | putative translation initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 237064 | 3048 | + | 0.43832 |
| NA | BF0001 | putative SpoU rRNA methylase family protein | SubName: Full=Putative SpoU rRNA methylase family protein; | chromosome | CDS | 67 | 528 | + | 0.407197 |
| NA | BF3695 | putative nucleotidyltransferase | SubName: Full=Putative nucleotidyltransferase; | chromosome | CDS | 4357981 | 717 | - | 0.324965 |
| NA | BF0930 | putative 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 1163502 | 318 | - | 0.40566 |
| NA | BF0445 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 525585 | 237 | - | 0.447257 |
| NA | BF2811 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 3271638 | 1302 | + | 0.467742 |
| NA | BF2325 | putative DNA primase | SubName: Full=Putative DNA primase; | chromosome | CDS | 2717731 | 3054 | - | 0.436477 |
| NA | BF3627 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4282951 | 1320 | - | 0.491667 |
| NA | BF0777 | possible endoribonuclease | SubName: Full=Possible endoribonuclease; | chromosome | CDS | 952333 | 1131 | + | 0.5084 |
| NA | BF0026 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 32311 | 330 | - | 0.415152 |
| NA | BF1940 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2263143 | 1011 | + | 0.493571 |
| NA | BF2724 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3171401 | 1113 | - | 0.477987 |
| NA | BF3783 | putative translation initation factor | SubName: Full=Putative translation initation factor; | chromosome | CDS | 4465440 | 351 | + | 0.452991 |
| NA | BF2831 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3290147 | 615 | - | 0.442276 |
| NA | BF3886 | putative membrane protein | SubName: Full=Putative membrane protein; | chromosome | CDS | 4573933 | 297 | - | 0.441077 |
| NA | BF0321 | putative peptide chain release factor | SubName: Full=Putative peptide chain release factor; | chromosome | CDS | 379054 | 960 | + | 0.453125 |
| NA | BF3931 | putative ribosomal large subunit pseudouridine synthase | SubName: Full=Putative ribosomal large subunit pseudouridine synthase; | chromosome | CDS | 4637517 | 666 | - | 0.430931 |
| NA | BF0027 | putative SAM/TRAM family methylase protein | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 32971 | 1374 | + | 0.467249 |
| NA | BF2372 | putative tRNA/rRNA methyltransferase | SubName: Full=Putative tRNA/rRNA methyltransferase; | chromosome | CDS | 2767920 | 762 | - | 0.393701 |
| NA | BF3654 | putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase | SubName: Full=Putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase; | chromosome | CDS | 4310321 | 1224 | + | 0.466503 |
| NA | BF0948 | putative 3'-5' exonuclease | SubName: Full=Putative 3-5 exonuclease; | chromosome | CDS | 1184103 | 651 | - | 0.436252 |
| NA | BF2162 | putative exported protein | SubName: Full=Putative exported protein; | chromosome | CDS | 2516326 | 504 | + | 0.410714 |
| NA | BF1278 | putative SpoU-like rRNA methylase | SubName: Full=Putative SpoU-like rRNA methylase; | chromosome | CDS | 1531513 | 813 | + | 0.473555 |
| NA | BF1468 | putative bacteriophage-related replication protein | SubName: Full=Putative bacteriophage-related replication protein; | chromosome | CDS | 1735881 | 1110 | + | 0.528829 |
| NA | BF1645 | putative nucleotide deaminase | SubName: Full=Putative nucleotide deaminase; | chromosome | CDS | 1920897 | 468 | - | 0.478632 |
| NA | BF0432 | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 514274 | 162 | + | 0.438272 |
| NA | BF3791 | putative ribosomal large subunit pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 4471397 | 1401 | - | 0.47823 |
| NA | BF4023 | putative sigma(54) modulation protein | SubName: Full=Putative sigma(54) modulation protein; | chromosome | CDS | 4727252 | 300 | - | 0.36 |
| NA | BF0076 | possible ribonuclease P component | SubName: Full=Possible ribonuclease P component; | chromosome | CDS | 73484 | 324 | + | 0.419753 |
| NA | BF2751 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3207636 | 477 | + | 0.444444 |
| NA | BF1668 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome | CDS | 1940577 | 1284 | - | 0.450156 |
| NA | BF0624 | possible Hsp-70 cofactor | SubName: Full=Possible Hsp-70 cofactor; | chromosome | CDS | 761279 | 849 | - | 0.383981 |
| NA | BF0762 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 930219 | 1794 | + | 0.410256 |
| NA | BF0637 | possible cytosine deaminase | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 772250 | 438 | + | 0.474886 |
| NA | BF4120 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 4848197 | 531 | + | 0.346516 |
| alaS | BF0689 | putative alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 843422 | 2619 | - | 0.472699 |
| ansA | BF2680 | putative L-asparaginase I | SubName: Full=Putative L-asparaginase I; EC=3.5.1.1; | chromosome | CDS | 3120537 | 1047 | + | 0.469914 |
| ansB | BF4039 | putative L-asparaginase II precursor | SubName: Full=Putative L-asparaginase II; EC=3.5.1.1; | chromosome | CDS | 4746952 | 1059 | + | 0.481586 |
| argS | BF4219 | putative arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 4988754 | 1794 | - | 0.471572 |
| asnS | BF3790 | asparaginyl-trna synthetase | RecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; | chromosome | CDS | 4469887 | 1404 | - | 0.444444 |
| aspS | BF2463 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; | chromosome | CDS | 2863354 | 1758 | + | 0.457907 |
| cysS | BF0161 | putative cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 172929 | 1476 | - | 0.481707 |
| dbpA | BF2071 | putative ATP-independent RNA helicase | SubName: Full=Putative ATP-independent RNA helicase; | chromosome | CDS | 2423047 | 1332 | + | 0.498498 |
| def | BF1691 | putative peptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 1968900 | 555 | + | 0.409009 |
| dtd | BF0110 | putative D-tyrosyl-tRNA acylase | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 114886 | 453 | - | 0.406181 |
| efp | BF0431 | putative elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 513514 | 567 | - | 0.451499 |
| fmt | BF3673 | putative methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 4338106 | 975 | - | 0.454359 |
| frr | BF0619 | putative ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 754508 | 561 | - | 0.465241 |
| fusA | BF4005 | putative translation elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 4707403 | 2118 | - | 0.446176 |
| glnS | BF2773 | glutaminyl-tRNA synthetase | SubName: Full=Glutaminyl-tRNA synthetase; EC=6.1.1.18; | chromosome | CDS | 3231448 | 1749 | + | 0.521441 |
| gltX | BF4030 | putative glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 4732693 | 1518 | - | 0.461792 |
| glyS | BF0354 | putative glycyl-tRNA synthetase | RecName: Full=Glycine--tRNA ligase; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase; | chromosome | CDS | 429964 | 1542 | + | 0.446174 |
| hslR | BF1162 | putative ribosome-associated heat shock protein | SubName: Full=Putative ribosome-associated heat shock protein; | chromosome | CDS | 1420768 | 426 | - | 0.422535 |
| ileS | BF2367 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 2761981 | 3426 | + | 0.411851 |
| infA | BF3981 | putative translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 4695668 | 219 | - | 0.342466 |
| infC | BF1695 | putative translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 1975272 | 612 | + | 0.398693 |
| ksgA | BF0706 | putative dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 864395 | 819 | - | 0.426129 |
| leuS | BF4372 | putative Leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 5198827 | 2832 | + | 0.445621 |
| lysU | BF3602 | putative lysyl-tRNA synthetase, heat inducible | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 4250619 | 1728 | + | 0.459491 |
| map | BF3982 | putative methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 4695890 | 798 | - | 0.422306 |
| miaA | BF0825 | putative tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase 1; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase 1; Short=DMAPP:tRNA dimethylallyltransferase 1; Short=DMATase 1; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase 1; Short=IPP transferase 1; Short=IPPT 1; Short=IPTase 1; | chromosome | CDS | 1019290 | 906 | - | 0.437086 |
| pheS | BF3104 | putative phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 3623521 | 1020 | + | 0.502941 |
| pnpA | BF4129 | putative polyribonucleotide nucleotidyltransferase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 4856811 | 2127 | + | 0.445698 |
| prfA | BF0832 | putative peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 1026381 | 1113 | - | 0.4708 |
| prfC | BF1297 | putative peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 1554916 | 1575 | + | 0.466667 |
| prmA | BF1638 | putative ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 1911559 | 843 | - | 0.472123 |
| proS | BF2515 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 2926352 | 1494 | - | 0.454485 |
| pth | BF1163 | putative peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 1421220 | 564 | - | 0.411348 |
| rhlE | BF2388 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome | CDS | 2787273 | 1257 | - | 0.417661 |
| rluD | BF0434 | ribosomal large subunit pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 515318 | 1074 | + | 0.47486 |
| rne | BF1566 | putative ribonuclease E | SubName: Full=Putative ribonuclease E; | chromosome | CDS | 1822486 | 1575 | - | 0.43746 |
| rplA | BF4018 | putative 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 4723393 | 699 | - | 0.402003 |
| rplB | BF4000 | putative 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 4704617 | 825 | - | 0.450909 |
| rplC | BF4003 | putative 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 4706380 | 618 | - | 0.435275 |
| rplD | BF4002 | putative 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 4705754 | 627 | - | 0.403509 |
| rplE | BF3991 | putative 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 4700948 | 558 | - | 0.390681 |
| rplF | BF3988 | putative 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 4699607 | 570 | - | 0.382456 |
| rplI | BF3630 | putative 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 4287072 | 444 | - | 0.38964 |
| rplJ | BF4017 | putative 50S ribosomal protein L10 | SubName: Full=Putative 50S ribosomal protein L10; | chromosome | CDS | 4722865 | 513 | - | 0.401559 |
| rplK | BF4019 | putative 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 4724107 | 444 | - | 0.434685 |
| rplL | BF4016 | putative 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 4722442 | 375 | - | 0.418667 |
| rplM | BF3787 | putative 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 4468446 | 462 | - | 0.406926 |
| rplN | BF3993 | putative 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 4701846 | 366 | - | 0.42623 |
| rplO | BF3984 | putative 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 4698053 | 447 | - | 0.378076 |
| rplP | BF3996 | putative 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 4702683 | 435 | - | 0.425287 |
| rplQ | BF3975 | putative 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 4692510 | 486 | - | 0.415638 |
| rplR | BF3987 | putative 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 4699241 | 345 | - | 0.4 |
| rplT | BF1697 | putative 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 1976247 | 351 | + | 0.418803 |
| rplV | BF3998 | putative 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 4703881 | 357 | - | 0.408964 |
| rplW | BF4001 | putative 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 4705447 | 291 | - | 0.350515 |
| rplX | BF3992 | putative 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 4701505 | 321 | - | 0.373832 |
| rpmA | BF0929 | putative 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 1163210 | 270 | - | 0.433333 |
| rpmB | BF2510 | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 2918508 | 261 | - | 0.386973 |
| rpmC | BF3995 | putative 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 4702480 | 198 | - | 0.348485 |
| rpmD | BF3985 | putative 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 4698530 | 177 | - | 0.38983 |
| rpmE | BF3140 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31 type B; | chromosome | CDS | 3661056 | 252 | + | 0.392857 |
| rpmG | BF2509 | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 2918293 | 189 | - | 0.349206 |
| rpmI | BF1696 | putative 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 1975949 | 198 | + | 0.363636 |
| rpmJ | BF3980 | putative 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 4695543 | 117 | - | 0.333333 |
| rpsA | BF0959 | putative 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 1199461 | 1794 | + | 0.432553 |
| rpsB | BF3785 | putative 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 4467096 | 837 | - | 0.421744 |
| rpsC | BF3997 | putative 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 4703141 | 735 | - | 0.409524 |
| rpsD | BF3977 | putative 30S ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 4694003 | 606 | - | 0.405941 |
| rpsE | BF3986 | putative 30S ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 4698717 | 519 | - | 0.404624 |
| rpsF | BF3632 | putative 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 4287802 | 345 | - | 0.373913 |
| rpsG | BF4006 | putative 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 4709574 | 477 | - | 0.406709 |
| rpsH | BF3989 | putative 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 4700192 | 396 | - | 0.343434 |
| rpsI | BF3786 | putative 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 4468053 | 387 | - | 0.444444 |
| rpsJ | BF4004 | putative 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 4707016 | 306 | - | 0.408497 |
| rpsK | BF3978 | putative 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 4694728 | 390 | - | 0.407692 |
| rpsL | BF4007 | putative 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 4710210 | 402 | - | 0.487562 |
| rpsM | BF3979 | putative 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 4695129 | 381 | - | 0.396325 |
| rpsN | BF3990 | putative 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 4700642 | 300 | - | 0.44 |
| rpsO | BF4259 | putative 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 5054313 | 270 | + | 0.407407 |
| rpsP | BF2731 | putative 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 3179871 | 546 | + | 0.454212 |
| rpsQ | BF3994 | putative 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 4702214 | 270 | - | 0.37037 |
| rpsR | BF3631 | putative 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 4287527 | 273 | - | 0.40293 |
| rpsS | BF3999 | putative 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 4704327 | 270 | - | 0.374074 |
| rpsT | BF0247 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 276015 | 255 | - | 0.34902 |
| serS | BF0928 | putative seryl-tRNA synthetase | SubName: Full=Putative seryl-tRNA synthetase; EC=6.1.1.11; | chromosome | CDS | 1161779 | 1275 | - | 0.459608 |
| tgt | BF2392 | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 2791881 | 1131 | - | 0.450928 |
| thrS | BF1694 | putative threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 1973213 | 1941 | + | 0.438949 |
| trmD | BF2484 | putative tRNA (guanine-N(1)-)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 2885125 | 678 | - | 0.432153 |
| trmU | BF1343 | putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA 2; EC=2.8.1.-; | chromosome | CDS | 1604507 | 1062 | + | 0.467043 |
| trpS | BF3809 | putative tryptophanyl-tRNA synthetase | SubName: Full=Putative tryptophanyl-tRNA synthetase; EC=6.1.1.2; | chromosome | CDS | 4498525 | 1092 | + | 0.481685 |
| truA | BF0847 | putative tRNA pseudouridine synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 1041749 | 759 | + | 0.444005 |
| tsf | BF3784 | putative elongation factor TS | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 4465980 | 993 | - | 0.437059 |
| tuf | BF4022 | Elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 4725502 | 1185 | - | 0.440506 |
| tyrS | BF0079 | putative tyrosyl-tRNA synthetase 1 | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 74735 | 1293 | + | 0.437742 |
| upeY | BF2606 | putative transcriptional regulatory protein | SubName: Full=Putative transcriptional regulatory protein; | chromosome | CDS | 3031735 | 519 | - | 0.421965 |
| upgY | BF0731 | putative transcriptional regulator | SubName: Full=Putative transcriptional regulator; | chromosome | CDS | 894922 | 537 | + | 0.430168 |
| uphY | BF3466 | putative LPS biosynthesis related transcriptional regulatory protein | SubName: Full=Putative LPS biosynthesis related transcriptional regulatory protein; | chromosome | CDS | 4090896 | 540 | - | 0.522222 |
| valS | BF0966 | putative valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 1205947 | 2631 | + | 0.473204 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|