Gene list
Applied filters:
COG category: Translation, ribosomal structure and biogenesis
Organism: Azoarcus sp. EbN1, EbN1
Number of genes found: 184
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Azoarcus sp. EbN1, EbN1 | |||||||||
---|---|---|---|---|---|---|---|---|---|
Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | p1D14 | hypothetical protein | SubName: Full=Uncharacterized protein; | 1 | CDS | 119149 | 264 | + | 0.625 |
NA | ebA1143 | nucleotidyl transferase | SubName: Full=Nucleotidyl transferase; | chromosome | CDS | 664326 | 690 | + | 0.723188 |
NA | p1B84 | hypothetical protein | SubName: Full=Uncharacterized protein; | 1 | CDS | 41657 | 336 | - | 0.550595 |
NA | ebA4133 | putative glutamyl-tRNA synthetase-related protein | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 2437578 | 948 | - | 0.716245 |
NA | ebA2097 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1232029 | 393 | - | 0.661578 |
NA | ebA3180 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1899673 | 585 | + | 0.661538 |
NA | ebA4819 | predicted RNA-binding protein containing KH domain, possibly ribosomal protein | SubName: Full=Predicted RNA-binding protein containing KH domain, possibly ribosomal protein; | chromosome | CDS | 2855216 | 471 | - | 0.660297 |
NA | ebA5030 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2986995 | 1155 | + | 0.700433 |
NA | ebA6390 | Adenine specific methylase, HemK family | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 3796606 | 936 | + | 0.65812 |
NA | p1B197 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | 1 | CDS | 111481 | 1722 | + | 0.573171 |
NA | ebA2502 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1505729 | 1410 | - | 0.620567 |
NA | ebA3606 | l-asparagine amidohydrolase | SubName: Full=L-asparagine amidohydrolase; EC=3.5.1.1; | chromosome | CDS | 2129343 | 1086 | + | 0.703499 |
NA | ebA3889 | initiation factor 2b family protein | RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; | chromosome | CDS | 2295562 | 1089 | - | 0.726354 |
NA | p1B376 | hypothetical protein | SubName: Full=Uncharacterized protein; | 1 | CDS | 206580 | 717 | + | 0.592748 |
NA | ebA4733 | radical SAM protein similar to MiaB | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 2799339 | 1332 | + | 0.62988 |
NA | ebA4502 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 2671502 | 1476 | - | 0.674797 |
NA | ebA3326 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1979493 | 636 | + | 0.674528 |
NA | ebA5483 | phage related protein (head-tail adaptor) | SubName: Full=Phage related protein (Head-tail adaptor); | chromosome | CDS | 3268695 | 333 | - | 0.642643 |
NA | ebA821 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 474456 | 519 | + | 0.701349 |
NA | ebA4984 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2965751 | 2112 | + | 0.696496 |
NA | ebA4139 | predicted GTPase, probably involved in regulation of ribosome function | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 2440079 | 1092 | - | 0.635531 |
NA | ebA412 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 246753 | 1452 | + | 0.670799 |
NA | ebA176 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 108096 | 1530 | + | 0.678431 |
NA | ebA4521 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2680563 | 609 | + | 0.633826 |
NA | ebA7270 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4286382 | 225 | - | 0.662222 |
NA | ebA2398 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1432533 | 951 | - | 0.664564 |
NA | ebA3262 | hypothetical protein | chromosome | CDS | 1943530 | 2037 | + | 0.670103 | |
NA | ebA5862 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3489034 | 771 | + | 0.601816 |
NA | p1B99 | hypothetical protein | SubName: Full=Uncharacterized protein; | 1 | CDS | 49219 | 2205 | - | 0.512925 |
NA | ebA3408 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2022377 | 654 | - | 0.674312 |
NA | ebA5985 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3550310 | 351 | + | 0.60114 |
NA | ebA650 | sun homolog protein | SubName: Full=Sun homolog protein; | chromosome | CDS | 378755 | 1284 | - | 0.690031 |
NA | ebD93 | hypothetical protein, possibly phage-related | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3267887 | 363 | - | 0.61157 |
NA | ebA5857 | putative metallo-beta-lactamase family protein | SubName: Full=Putative metallo-beta-lactamase family protein; | chromosome | CDS | 3486558 | 1455 | + | 0.686598 |
NA | ebA5139 | Metallo-beta-lactamase superfamily protein | SubName: Full=Metallo-beta-lactamase superfamily protein; | chromosome | CDS | 3046701 | 1410 | + | 0.626241 |
NA | ebA3090 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1843074 | 495 | + | 0.60202 |
NA | ebA1496 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 884929 | 1323 | + | 0.703704 |
NA | ebA6706 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3983857 | 768 | - | 0.669271 |
NA | ebA768 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 439693 | 474 | + | 0.516878 |
NA | ebA713 | Pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 410938 | 693 | - | 0.699856 |
NA | ebA2980 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1777714 | 471 | + | 0.626327 |
NA | ebA825 | translation elongation factor G | SubName: Full=Translation elongation factor G; | chromosome | CDS | 478206 | 2052 | + | 0.663743 |
NA | ebA5406 | probable cytosine/adenosine deaminases | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 3216047 | 465 | + | 0.683871 |
NA | ebB108 | Sigma 54 modulation protein / S30EA ribosomal protein | SubName: Full=Sigma 54 modulation protein / S30EA ribosomal protein; | chromosome | CDS | 2015102 | 324 | - | 0.564815 |
alaS | ebA1021 | Alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 596024 | 2622 | - | 0.666285 |
argS | ebA3614 | Arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 2136088 | 1764 | + | 0.679705 |
aspS | ebA4339 | Aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 2567349 | 1800 | - | 0.655556 |
cafA | ebA3964 | ribonuclease G (RNase G) | SubName: Full=Ribonuclease G (RNase G); EC=3.1.4.-; | chromosome | CDS | 2334634 | 1455 | - | 0.643986 |
cca | ebA3379 | tRNA adenylyltransferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 2006477 | 1224 | - | 0.696895 |
cspR | ebB33 | RNA methyltransferase CspR (SpoU class) | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 621323 | 465 | - | 0.666667 |
cysS | ebA4792 | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 2835537 | 1386 | + | 0.632035 |
deaD | ebA5738 | ATP-dependent RNA helicase DeaD | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 3402825 | 1977 | - | 0.670207 |
def1 | ebB91 | N-formylmethionyl-tRNA deformylase 1 | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 1758348 | 504 | - | 0.634921 |
def2 | ebA62 | N-formylmethionyl-tRNA deformylase 2 | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 33775 | 528 | - | 0.649621 |
dtd | ebA64 | D-tyrosyl-tRNA(Tyr) deacylase | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 34345 | 459 | - | 0.671024 |
dusB | ebA1152 | tRNA-dihydrouridine synthase | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 667703 | 1053 | + | 0.659069 |
efp | ebA2973 | translation elongation factor P (EF-P) | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 1774768 | 558 | - | 0.586021 |
fmt | ebA2954 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 1757401 | 951 | - | 0.715037 |
frr | ebA5990 | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 3553093 | 558 | + | 0.62724 |
ftsJ | ebA4820 | cell division protein FtsJ | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 2855726 | 624 | + | 0.636218 |
fusA | ebA3824 | Elongation factor G 1 (EF-G 1) | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 2257359 | 2097 | + | 0.613257 |
gatA | ebA3030 | Glutamyl-tRNA(Gln) amidotransferase subunit A | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 1808215 | 1473 | - | 0.702648 |
gatB | ebA3029 | Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 1806717 | 1482 | - | 0.665317 |
glnS | ebA4065 | Glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; | chromosome | CDS | 2397730 | 1734 | - | 0.647059 |
gltX | ebA6855 | Glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 4067241 | 1398 | - | 0.660229 |
glyQ | ebA1331 | glycyl-tRNA synthetase alpha chain | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; | chromosome | CDS | 786047 | 948 | - | 0.636076 |
glyS | ebA1330 | glycyl-tRNA synthetase beta chain | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 783960 | 2091 | - | 0.68197 |
gshB | ebA2546 | glutathione synthetase (GSH synthetase) | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 1527440 | 975 | - | 0.684103 |
hemK | ebA1176 | Protein-glutamine N-methyltransferase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 686084 | 843 | - | 0.68446 |
hisS | ebA1260 | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 745013 | 1317 | - | 0.661352 |
ileS | ebA4448 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 2636017 | 2820 | - | 0.653192 |
infA | ebA1871 | translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1 1; | chromosome | CDS | 1087448 | 258 | - | 0.596899 |
infA1 | ebD115 | Translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1 2; | chromosome | CDS | 3979379 | 261 | - | 0.601533 |
infB | ebA5841 | translation initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 3474796 | 2838 | + | 0.651868 |
infC | ebA870 | translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 509123 | 522 | - | 0.58046 |
ksgA | ebA1138 | dimethyladenosine transferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 657584 | 798 | - | 0.677945 |
lasT | ebA6408 | RNA methyltransferase | SubName: Full=RNA methyltransferase; | chromosome | CDS | 3806116 | 729 | - | 0.657064 |
leuS | ebA4386 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 2593442 | 2622 | - | 0.641114 |
ligT | ebA6539 | 2'-5' RNA ligase | SubName: Full=2-5 RNA ligase; EC=6.5.1.-; | chromosome | CDS | 3876909 | 606 | - | 0.70462 |
lysU | ebA6841 | Lysyl-tRNA synthetase (class II) | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 4059133 | 1509 | + | 0.640822 |
map | ebA5984 | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 3549466 | 822 | - | 0.650852 |
miaA | ebA7097 | tRNA delta(2)-isopentenylpyrophosphate transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 4188477 | 1149 | + | 0.707572 |
miaB | ebA1339 | 2-methylthioadenine synthetase | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 790966 | 1338 | - | 0.64574 |
pcnB | ebA7112 | RNA-poly(A) polymerase | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 4198988 | 1359 | + | 0.677704 |
pheS | ebA868 | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 507313 | 1032 | - | 0.641473 |
pnp | ebA5846 | polyribonucleotide nucleotidyltransferase protein | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 3479464 | 2100 | + | 0.642381 |
prfA | ebA1177 | peptide chain release factor 1 (RF-1) | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 686928 | 1080 | - | 0.67037 |
prfB | ebA5809 | peptide chain release factor 2 (RF-2),gene containing programmed frameshift site | RecName: Full=Peptide chain release factor 2; Short=RF-2; | chromosome | CDS | 3450414 | 1105 | - | 0.625339 |
prfC | ebA3251 | peptide chain release factor 3 (RF-3) | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 1938453 | 1647 | + | 0.638737 |
prmA | ebA1475 | Ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 876605 | 906 | + | 0.696468 |
proS | ebA950 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 560047 | 1752 | + | 0.648973 |
pth | ebA1411 | peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 828103 | 591 | + | 0.663283 |
queA | ebA1413 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase, first step of queuosine biosynthesis | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 828934 | 1065 | + | 0.661972 |
rbfA | ebA5842 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 3477637 | 384 | + | 0.627604 |
relE | ebB86 | RelE-like Cytotoxic translational repressor of toxin-antitoxin stability system | SubName: Full=RelE-like Cytotoxic translational repressor of toxin-antitoxin stability system; | chromosome | CDS | 1597607 | 378 | - | 0.619048 |
rhlE1 | ebA3563 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 2106258 | 1392 | + | 0.688218 |
rhlE2 | ebA3682 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 2171527 | 1527 | - | 0.685658 |
rimK | ebA6974 | glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) | SubName: Full=Glutathione synthase/Ribosomal protein S6 modification enzyme (Glutaminyl transferase); | chromosome | CDS | 4131029 | 1470 | + | 0.652381 |
rimL | ebA6209 | probable acetyltransferase | SubName: Full=Probable acetyltransferase; | chromosome | CDS | 3678933 | 543 | - | 0.639042 |
rimM | ebA7167 | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 4226594 | 507 | + | 0.65286 |
rluC | ebA5443 | ribosomal large subunit pseudouridine synthase C | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3248002 | 957 | + | 0.654127 |
rluD | ebA4725 | ribosomal large subunit pseudouridine synthase D | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2792935 | 921 | + | 0.698154 |
rne | ebA5441 | ribonuclease E (RNase E) | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 3244594 | 3024 | - | 0.650794 |
rnpA | ebB90 | Ribonuclease P protein component | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 1693170 | 360 | - | 0.608333 |
rph | c1A232 | Ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 1376725 | 720 | + | 0.702778 |
rplA | ebA3814 | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 2245818 | 699 | + | 0.649499 |
rplB | ebA3831 | 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 2262744 | 828 | + | 0.661836 |
rplC | ebA3828 | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 2261159 | 645 | + | 0.627907 |
rplD | ebA3829 | 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 2261815 | 621 | + | 0.608696 |
rplE | ebA3839 | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 2266738 | 540 | + | 0.572222 |
rplF | ebA3841 | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 2268008 | 534 | + | 0.61985 |
rplI | ebA4078 | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 2409386 | 453 | + | 0.622517 |
rplJ | ebA3816 | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 2246752 | 501 | + | 0.618762 |
rplK | ebA3812 | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 2245384 | 432 | + | 0.625 |
rplL | ebB123 | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 2247292 | 375 | + | 0.632 |
rplM | ebA938 | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 555514 | 429 | - | 0.58042 |
rplN | ebB127 | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 2266030 | 369 | + | 0.609756 |
rplO | ebB131 | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 2269632 | 438 | + | 0.666667 |
rplP | ebA3834 | 50s Ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 2265011 | 414 | + | 0.623188 |
rplQ | ebB133 | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 2274276 | 405 | + | 0.624691 |
rplR | ebB130 | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 2268554 | 354 | + | 0.638418 |
rplS | ebA7169 | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 4227985 | 387 | + | 0.617571 |
rplT | ebB25 | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 508412 | 360 | - | 0.608333 |
rplU | ebB22 | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 492262 | 312 | + | 0.589744 |
rplV | ebA3832 | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 2263867 | 330 | + | 0.606061 |
rplW | ebB125 | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 2262432 | 306 | + | 0.584967 |
rplX | ebB128 | 50S Ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 2266411 | 318 | + | 0.606918 |
rplY | ebA1409 | 50S Ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 827447 | 606 | + | 0.635314 |
rpmA | ebC2 | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 492592 | 264 | + | 0.647727 |
rpmB | ebA4482 | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 2658781 | 237 | - | 0.578059 |
rpmC | ebC3 | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 2265427 | 195 | + | 0.558974 |
rpmD | ebC4 | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 2269448 | 183 | + | 0.584699 |
rpmE | ebA5215 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 3089977 | 219 | - | 0.611872 |
rpmF | ebC5 | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 3251538 | 180 | + | 0.594444 |
rpmG | ebC6 | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 2658578 | 168 | - | 0.535714 |
rpmH | ebC7 | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 1693531 | 135 | - | 0.637037 |
rpmI | ebC8 | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 508784 | 198 | - | 0.59596 |
rpmJ | ebC9 | 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 2271656 | 114 | + | 0.570175 |
rpsA | ebA903 | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 532380 | 1776 | - | 0.598536 |
rpsB | ebA5986 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 3550657 | 756 | + | 0.624339 |
rpsC | ebA3833 | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 2264206 | 837 | + | 0.611708 |
rpsD | ebA3852 | 30S Ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 2272601 | 630 | + | 0.62381 |
rpsE | ebA3844 | 30S ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 2268920 | 525 | + | 0.634286 |
rpsF | ebA4075 | 30S Ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 2408391 | 387 | + | 0.625323 |
rpsG | ebA3822 | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 2256782 | 471 | + | 0.62845 |
rpsH | ebB129 | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 2267603 | 396 | + | 0.613636 |
rpsI | ebA937 | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 555108 | 393 | - | 0.597964 |
rpsJ | ebB124 | 30S Ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 2260734 | 312 | + | 0.605769 |
rpsK | ebA3850 | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 2272198 | 390 | + | 0.617949 |
rpsL | ebA3820 | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 2256336 | 414 | + | 0.57971 |
rpsM | ebB132 | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 2271823 | 363 | + | 0.573003 |
rpsN | ebC1 | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 2267285 | 306 | + | 0.611111 |
rpsO | ebA5844 | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 3479032 | 270 | + | 0.611111 |
rpsP | ebB247 | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 4226310 | 252 | + | 0.630952 |
rpsQ | ebC10 | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 2265618 | 270 | + | 0.596296 |
rpsR | ebB142 | 30S Ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 2409095 | 276 | + | 0.576087 |
rpsS | ebB126 | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 2263582 | 276 | + | 0.594203 |
rpsT | ebB177 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 3019357 | 267 | + | 0.644195 |
rpsU | ebA4370 | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 2586390 | 213 | - | 0.600939 |
rsuA | ebA6135 | pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 3636395 | 954 | + | 0.684486 |
rsuA | ebA2976 | ribosomal small subunit pseudouridine synthase A protein | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1776938 | 720 | - | 0.652778 |
rsuA | ebA4056 | propable 16S pseudouridylate synthase | SubName: Full=Propable 16S pseudouridylate synthase; | chromosome | CDS | 2391967 | 945 | + | 0.681481 |
rumA | ebA771 | 23S rRNA (Uracil-5-)-methyltransferase | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 440898 | 1302 | - | 0.658218 |
serS | ebA7034 | Seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 4155951 | 1284 | - | 0.649533 |
spoU | ebA6008 | tRNA/rRNA methyltransferase | SubName: Full=tRNA/rRNA methyltransferase; EC=2.1.1.-; | chromosome | CDS | 3565281 | 786 | + | 0.731552 |
spoU | ebA1246 | tRNA/RRNA methyltransferase protein | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 731680 | 735 | - | 0.689796 |
sua5 | ebA110 | putative translation factor (SUA5) | SubName: Full=Putative translation factor (SUA5); | chromosome | CDS | 55740 | 1056 | - | 0.704545 |
sun | ebA2833 | tRNA and rRNA cytosine-C5-methylases sun | SubName: Full=tRNA and rRNA cytosine-C5-methylases sun; | chromosome | CDS | 1686363 | 1344 | - | 0.685268 |
tdcF | ebB66 | putative translation initiation inhibitor, yjgF family | SubName: Full=Putative translation initiation inhibitor, yjgF family; | chromosome | CDS | 1354736 | 381 | - | 0.656168 |
tgt | ebA1415 | Queuosine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 829988 | 1113 | + | 0.677448 |
thrS | ebA871 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 509673 | 1917 | - | 0.609807 |
trmA | ebA595 | tRNA (Uracil-5-)-methyltransferase | RecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; | chromosome | CDS | 346790 | 1107 | + | 0.658537 |
trmD | ebA7168 | tRNA (Guanine-N(1)-)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 4227108 | 792 | + | 0.657828 |
trmU | ebA986 | tRNA5-methylaminomethyl-2-thiouridylate-methyltr ansferaseprotein | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 580161 | 1125 | - | 0.648889 |
trpS | ebA6131 | tryptophanyl-tRNA synthetase | SubName: Full=Tryptophanyl-tRNA synthetase; EC=6.1.1.2; | chromosome | CDS | 3633709 | 1203 | + | 0.64256 |
truA | ebA4770 | pseudouridylate synthase A | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 2823704 | 795 | + | 0.649057 |
truB | ebA5843 | tRNA pseudouridine 55 synthase | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 3478027 | 927 | + | 0.652643 |
tsf | ebA5987 | elongation factor Ts (EF-Ts) | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 3551465 | 891 | + | 0.659933 |
tufB | ebA3808 | Elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 2243032 | 1191 | + | 0.648195 |
tufB | ebA3826 | Elongation factor Tu | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 2259484 | 1191 | + | 0.648195 |
tyrS | ebA931 | t-RNA synthetase, class Ib | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 550821 | 1200 | - | 0.573333 |
valS | ebA7186 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 4238108 | 2847 | + | 0.641377 |
yjgH | p2A330 | conserved hypothetical protein, similar to yjgH of E. coli | SubName: Full=Uncharacterized protein; | 2 | CDS | 180639 | 420 | + | 0.616667 |
yrdC | ebA6128 | putative translation factor YrdC/SUA5 | SubName: Full=Putative translation factor YrdC/SUA5; | chromosome | CDS | 3632284 | 630 | + | 0.639683 |