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2024-04-30 04:30:37

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Azoarcus sp. EbN1, EbN1

Number of genes found: 184

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Azoarcus sp. EbN1, EbN1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ebA1143 nucleotidyl transferasechromosome CDS664326 690 + 0.723188
NA p1B99 hypothetical protein1 CDS49219 2205 - 0.512925
NA ebA1496 hypothetical proteinchromosome CDS884929 1323 + 0.703704
NA p1B197 conserved hypothetical protein1 CDS111481 1722 + 0.573171
NA ebA768 hypothetical proteinchromosome CDS439693 474 + 0.516878
NA ebA6706 hypothetical proteinchromosome CDS3983857 768 - 0.669271
NA ebA650 sun homolog proteinchromosome CDS378755 1284 - 0.690031
NA ebA713 Pseudouridine synthasechromosome CDS410938 693 - 0.699856
NA ebA5857 putative metallo-beta-lactamase family proteinchromosome CDS3486558 1455 + 0.686598
NA ebA3262 hypothetical proteinchromosome CDS1943530 2037 + 0.670103
NA ebA3408 hypothetical proteinchromosome CDS2022377 654 - 0.674312
NA ebA3889 initiation factor 2b family proteinchromosome CDS2295562 1089 - 0.726354
NA ebD93 hypothetical protein, possibly phage-relatedchromosome CDS3267887 363 - 0.61157
NA ebA4521 hypothetical proteinchromosome CDS2680563 609 + 0.633826
NA ebA4133 putative glutamyl-tRNA synthetase-related proteinchromosome CDS2437578 948 - 0.716245
NA ebA4733 radical SAM protein similar to MiaBchromosome CDS2799339 1332 + 0.62988
NA ebA4819 predicted RNA-binding protein containing KH domain, possibly ribosomal proteinchromosome CDS2855216 471 - 0.660297
NA ebA3606 l-asparagine amidohydrolasechromosome CDS2129343 1086 + 0.703499
NA ebA4502 ATP-dependent RNA helicasechromosome CDS2671502 1476 - 0.674797
NA ebA5406 probable cytosine/adenosine deaminaseschromosome CDS3216047 465 + 0.683871
NA ebA5483 phage related protein (head-tail adaptor)chromosome CDS3268695 333 - 0.642643
NA ebA825 translation elongation factor Gchromosome CDS478206 2052 + 0.663743
NA ebA5030 conserved hypothetical proteinchromosome CDS2986995 1155 + 0.700433
NA ebA2097 hypothetical proteinchromosome CDS1232029 393 - 0.661578
NA ebA5862 hypothetical proteinchromosome CDS3489034 771 + 0.601816
NA ebA5139 Metallo-beta-lactamase superfamily proteinchromosome CDS3046701 1410 + 0.626241
NA ebB108 Sigma 54 modulation protein / S30EA ribosomal proteinchromosome CDS2015102 324 - 0.564815
NA ebA4984 conserved hypothetical proteinchromosome CDS2965751 2112 + 0.696496
NA p1D14 hypothetical protein1 CDS119149 264 + 0.625
NA ebA2502 hypothetical proteinchromosome CDS1505729 1410 - 0.620567
NA ebA7270 conserved hypothetical proteinchromosome CDS4286382 225 - 0.662222
NA ebA821 hypothetical proteinchromosome CDS474456 519 + 0.701349
NA ebA5985 hypothetical proteinchromosome CDS3550310 351 + 0.60114
NA p1B376 hypothetical protein1 CDS206580 717 + 0.592748
NA ebA412 conserved hypothetical proteinchromosome CDS246753 1452 + 0.670799
NA ebA3326 hypothetical proteinchromosome CDS1979493 636 + 0.674528
NA ebA2398 conserved hypothetical proteinchromosome CDS1432533 951 - 0.664564
NA ebA4139 predicted GTPase, probably involved in regulation of ribosome functionchromosome CDS2440079 1092 - 0.635531
NA ebA176 conserved hypothetical proteinchromosome CDS108096 1530 + 0.678431
NA ebA3090 hypothetical proteinchromosome CDS1843074 495 + 0.60202
NA ebA3180 hypothetical proteinchromosome CDS1899673 585 + 0.661538
NA ebA2980 conserved hypothetical proteinchromosome CDS1777714 471 + 0.626327
NA ebA6390 Adenine specific methylase, HemK familychromosome CDS3796606 936 + 0.65812
NA p1B84 hypothetical protein1 CDS41657 336 - 0.550595
alaS ebA1021 Alanyl-tRNA synthetasechromosome CDS596024 2622 - 0.666285
argS ebA3614 Arginyl-tRNA synthetasechromosome CDS2136088 1764 + 0.679705
aspS ebA4339 Aspartyl-tRNA synthetasechromosome CDS2567349 1800 - 0.655556
cafA ebA3964 ribonuclease G (RNase G)chromosome CDS2334634 1455 - 0.643986
cca ebA3379 tRNA adenylyltransferasechromosome CDS2006477 1224 - 0.696895
cspR ebB33 RNA methyltransferase CspR (SpoU class)chromosome CDS621323 465 - 0.666667
cysS ebA4792 cysteinyl-tRNA synthetasechromosome CDS2835537 1386 + 0.632035
deaD ebA5738 ATP-dependent RNA helicase DeaDchromosome CDS3402825 1977 - 0.670207
def1 ebB91 N-formylmethionyl-tRNA deformylase 1chromosome CDS1758348 504 - 0.634921
def2 ebA62 N-formylmethionyl-tRNA deformylase 2chromosome CDS33775 528 - 0.649621
dtd ebA64 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS34345 459 - 0.671024
dusB ebA1152 tRNA-dihydrouridine synthasechromosome CDS667703 1053 + 0.659069
efp ebA2973 translation elongation factor P (EF-P)chromosome CDS1774768 558 - 0.586021
fmt ebA2954 methionyl-tRNA formyltransferasechromosome CDS1757401 951 - 0.715037
frr ebA5990 ribosome recycling factorchromosome CDS3553093 558 + 0.62724
ftsJ ebA4820 cell division protein FtsJchromosome CDS2855726 624 + 0.636218
fusA ebA3824 Elongation factor G 1 (EF-G 1)chromosome CDS2257359 2097 + 0.613257
gatA ebA3030 Glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS1808215 1473 - 0.702648
gatB ebA3029 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit Bchromosome CDS1806717 1482 - 0.665317
glnS ebA4065 Glutaminyl-tRNA synthetasechromosome CDS2397730 1734 - 0.647059
gltX ebA6855 Glutamyl-tRNA synthetasechromosome CDS4067241 1398 - 0.660229
glyQ ebA1331 glycyl-tRNA synthetase alpha chainchromosome CDS786047 948 - 0.636076
glyS ebA1330 glycyl-tRNA synthetase beta chainchromosome CDS783960 2091 - 0.68197
gshB ebA2546 glutathione synthetase (GSH synthetase)chromosome CDS1527440 975 - 0.684103
hemK ebA1176 Protein-glutamine N-methyltransferasechromosome CDS686084 843 - 0.68446
hisS ebA1260 histidyl-tRNA synthetasechromosome CDS745013 1317 - 0.661352
ileS ebA4448 isoleucyl-tRNA synthetasechromosome CDS2636017 2820 - 0.653192
infA ebA1871 translation initiation factor IF-1chromosome CDS1087448 258 - 0.596899
infA1 ebD115 Translation initiation factor IF-1chromosome CDS3979379 261 - 0.601533
infB ebA5841 translation initiation factor IF-2chromosome CDS3474796 2838 + 0.651868
infC ebA870 translation initiation factor IF-3chromosome CDS509123 522 - 0.58046
ksgA ebA1138 dimethyladenosine transferasechromosome CDS657584 798 - 0.677945
lasT ebA6408 RNA methyltransferasechromosome CDS3806116 729 - 0.657064
leuS ebA4386 leucyl-tRNA synthetasechromosome CDS2593442 2622 - 0.641114
ligT ebA6539 2'-5' RNA ligasechromosome CDS3876909 606 - 0.70462
lysU ebA6841 Lysyl-tRNA synthetase (class II)chromosome CDS4059133 1509 + 0.640822
map ebA5984 methionine aminopeptidasechromosome CDS3549466 822 - 0.650852
miaA ebA7097 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4188477 1149 + 0.707572
miaB ebA1339 2-methylthioadenine synthetasechromosome CDS790966 1338 - 0.64574
pcnB ebA7112 RNA-poly(A) polymerasechromosome CDS4198988 1359 + 0.677704
pheS ebA868 phenylalanyl-tRNA synthetase alpha chainchromosome CDS507313 1032 - 0.641473
pnp ebA5846 polyribonucleotide nucleotidyltransferase proteinchromosome CDS3479464 2100 + 0.642381
prfA ebA1177 peptide chain release factor 1 (RF-1)chromosome CDS686928 1080 - 0.67037
prfB ebA5809 peptide chain release factor 2 (RF-2),gene containing programmed frameshift sitechromosome CDS3450414 1105 - 0.625339
prfC ebA3251 peptide chain release factor 3 (RF-3)chromosome CDS1938453 1647 + 0.638737
prmA ebA1475 Ribosomal protein L11 methyltransferasechromosome CDS876605 906 + 0.696468
proS ebA950 prolyl-tRNA synthetasechromosome CDS560047 1752 + 0.648973
pth ebA1411 peptidyl-tRNA hydrolasechromosome CDS828103 591 + 0.663283
queA ebA1413 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, first step of queuosine biosynthesischromosome CDS828934 1065 + 0.661972
rbfA ebA5842 ribosome-binding factor Achromosome CDS3477637 384 + 0.627604
relE ebB86 RelE-like Cytotoxic translational repressor of toxin-antitoxin stability systemchromosome CDS1597607 378 - 0.619048
rhlE1 ebA3563 ATP-dependent RNA helicasechromosome CDS2106258 1392 + 0.688218
rhlE2 ebA3682 ATP-dependent RNA helicasechromosome CDS2171527 1527 - 0.685658
rimK ebA6974 glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)chromosome CDS4131029 1470 + 0.652381
rimL ebA6209 probable acetyltransferasechromosome CDS3678933 543 - 0.639042
rimM ebA7167 16S rRNA processing proteinchromosome CDS4226594 507 + 0.65286
rluC ebA5443 ribosomal large subunit pseudouridine synthase Cchromosome CDS3248002 957 + 0.654127
rluD ebA4725 ribosomal large subunit pseudouridine synthase Dchromosome CDS2792935 921 + 0.698154
rne ebA5441 ribonuclease E (RNase E)chromosome CDS3244594 3024 - 0.650794
rnpA ebB90 Ribonuclease P protein componentchromosome CDS1693170 360 - 0.608333
rph c1A232 Ribonuclease PHchromosome CDS1376725 720 + 0.702778
rplA ebA3814 50S ribosomal protein L1chromosome CDS2245818 699 + 0.649499
rplB ebA3831 50S ribosomal protein L2chromosome CDS2262744 828 + 0.661836
rplC ebA3828 50S ribosomal protein L3chromosome CDS2261159 645 + 0.627907
rplD ebA3829 50S ribosomal protein L4chromosome CDS2261815 621 + 0.608696
rplE ebA3839 50S ribosomal protein L5chromosome CDS2266738 540 + 0.572222
rplF ebA3841 50S ribosomal protein L6chromosome CDS2268008 534 + 0.61985
rplI ebA4078 50S ribosomal protein L9chromosome CDS2409386 453 + 0.622517
rplJ ebA3816 50S ribosomal protein L10chromosome CDS2246752 501 + 0.618762
rplK ebA3812 50S ribosomal protein L11chromosome CDS2245384 432 + 0.625
rplL ebB123 50S ribosomal protein L7/L12chromosome CDS2247292 375 + 0.632
rplM ebA938 50S ribosomal protein L13chromosome CDS555514 429 - 0.58042
rplN ebB127 50S ribosomal protein L14chromosome CDS2266030 369 + 0.609756
rplO ebB131 50S ribosomal protein L15chromosome CDS2269632 438 + 0.666667
rplP ebA3834 50s Ribosomal protein L16chromosome CDS2265011 414 + 0.623188
rplQ ebB133 50S ribosomal protein L17chromosome CDS2274276 405 + 0.624691
rplR ebB130 50S ribosomal protein L18chromosome CDS2268554 354 + 0.638418
rplS ebA7169 50S ribosomal protein L19chromosome CDS4227985 387 + 0.617571
rplT ebB25 50S ribosomal protein L20chromosome CDS508412 360 - 0.608333
rplU ebB22 50S ribosomal protein L21chromosome CDS492262 312 + 0.589744
rplV ebA3832 50S ribosomal protein L22chromosome CDS2263867 330 + 0.606061
rplW ebB125 50S ribosomal protein L23chromosome CDS2262432 306 + 0.584967
rplX ebB128 50S Ribosomal protein L24chromosome CDS2266411 318 + 0.606918
rplY ebA1409 50S Ribosomal protein L25chromosome CDS827447 606 + 0.635314
rpmA ebC2 50S ribosomal protein L27chromosome CDS492592 264 + 0.647727
rpmB ebA4482 50S ribosomal protein L28chromosome CDS2658781 237 - 0.578059
rpmC ebC3 50S ribosomal protein L29chromosome CDS2265427 195 + 0.558974
rpmD ebC4 50S ribosomal protein L30chromosome CDS2269448 183 + 0.584699
rpmE ebA5215 50S ribosomal protein L31chromosome CDS3089977 219 - 0.611872
rpmF ebC5 50S ribosomal protein L32chromosome CDS3251538 180 + 0.594444
rpmG ebC6 50S ribosomal protein L33chromosome CDS2658578 168 - 0.535714
rpmH ebC7 50S ribosomal protein L34chromosome CDS1693531 135 - 0.637037
rpmI ebC8 50S ribosomal protein L35chromosome CDS508784 198 - 0.59596
rpmJ ebC9 50S ribosomal protein L36chromosome CDS2271656 114 + 0.570175
rpsA ebA903 30S ribosomal protein S1chromosome CDS532380 1776 - 0.598536
rpsB ebA5986 30S ribosomal protein S2chromosome CDS3550657 756 + 0.624339
rpsC ebA3833 30S ribosomal protein S3chromosome CDS2264206 837 + 0.611708
rpsD ebA3852 30S Ribosomal protein S4chromosome CDS2272601 630 + 0.62381
rpsE ebA3844 30S ribosomal protein S5chromosome CDS2268920 525 + 0.634286
rpsF ebA4075 30S Ribosomal protein S6chromosome CDS2408391 387 + 0.625323
rpsG ebA3822 30S ribosomal protein S7chromosome CDS2256782 471 + 0.62845
rpsH ebB129 30S ribosomal protein S8chromosome CDS2267603 396 + 0.613636
rpsI ebA937 30S ribosomal protein S9chromosome CDS555108 393 - 0.597964
rpsJ ebB124 30S Ribosomal protein S10chromosome CDS2260734 312 + 0.605769
rpsK ebA3850 30S ribosomal protein S11chromosome CDS2272198 390 + 0.617949
rpsL ebA3820 30S ribosomal protein S12chromosome CDS2256336 414 + 0.57971
rpsM ebB132 30S ribosomal protein S13chromosome CDS2271823 363 + 0.573003
rpsN ebC1 30S ribosomal protein S14chromosome CDS2267285 306 + 0.611111
rpsO ebA5844 30S ribosomal protein S15chromosome CDS3479032 270 + 0.611111
rpsP ebB247 30S ribosomal protein S16chromosome CDS4226310 252 + 0.630952
rpsQ ebC10 30S ribosomal protein S17chromosome CDS2265618 270 + 0.596296
rpsR ebB142 30S Ribosomal protein S18chromosome CDS2409095 276 + 0.576087
rpsS ebB126 30S ribosomal protein S19chromosome CDS2263582 276 + 0.594203
rpsT ebB177 30S ribosomal protein S20chromosome CDS3019357 267 + 0.644195
rpsU ebA4370 30S ribosomal protein S21chromosome CDS2586390 213 - 0.600939
rsuA ebA4056 propable 16S pseudouridylate synthasechromosome CDS2391967 945 + 0.681481
rsuA ebA6135 pseudouridylate synthasechromosome CDS3636395 954 + 0.684486
rsuA ebA2976 ribosomal small subunit pseudouridine synthase A proteinchromosome CDS1776938 720 - 0.652778
rumA ebA771 23S rRNA (Uracil-5-)-methyltransferasechromosome CDS440898 1302 - 0.658218
serS ebA7034 Seryl-tRNA synthetasechromosome CDS4155951 1284 - 0.649533
spoU ebA6008 tRNA/rRNA methyltransferasechromosome CDS3565281 786 + 0.731552
spoU ebA1246 tRNA/RRNA methyltransferase proteinchromosome CDS731680 735 - 0.689796
sua5 ebA110 putative translation factor (SUA5)chromosome CDS55740 1056 - 0.704545
sun ebA2833 tRNA and rRNA cytosine-C5-methylases sunchromosome CDS1686363 1344 - 0.685268
tdcF ebB66 putative translation initiation inhibitor, yjgF familychromosome CDS1354736 381 - 0.656168
tgt ebA1415 Queuosine tRNA-ribosyltransferasechromosome CDS829988 1113 + 0.677448
thrS ebA871 threonyl-tRNA synthetasechromosome CDS509673 1917 - 0.609807
trmA ebA595 tRNA (Uracil-5-)-methyltransferasechromosome CDS346790 1107 + 0.658537
trmD ebA7168 tRNA (Guanine-N(1)-)-methyltransferasechromosome CDS4227108 792 + 0.657828
trmU ebA986 tRNA5-methylaminomethyl-2-thiouridylate-methyltr ansferaseproteinchromosome CDS580161 1125 - 0.648889
trpS ebA6131 tryptophanyl-tRNA synthetasechromosome CDS3633709 1203 + 0.64256
truA ebA4770 pseudouridylate synthase Achromosome CDS2823704 795 + 0.649057
truB ebA5843 tRNA pseudouridine 55 synthasechromosome CDS3478027 927 + 0.652643
tsf ebA5987 elongation factor Ts (EF-Ts)chromosome CDS3551465 891 + 0.659933
tufB ebA3826 Elongation factor Tuchromosome CDS2259484 1191 + 0.648195
tufB ebA3808 Elongation factor Tuchromosome CDS2243032 1191 + 0.648195
tyrS ebA931 t-RNA synthetase, class Ibchromosome CDS550821 1200 - 0.573333
valS ebA7186 valyl-tRNA synthetasechromosome CDS4238108 2847 + 0.641377
yjgH p2A330 conserved hypothetical protein, similar to yjgH of E. coli2 CDS180639 420 + 0.616667
yrdC ebA6128 putative translation factor YrdC/SUA5chromosome CDS3632284 630 + 0.639683