Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Acinetobacter sp. ADP1, ADP1
Number of genes found: 176
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Acinetobacter sp. ADP1, ADP1 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | ACIAD0728 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 713280 | 360 | - | 0.327778 |
NA | ACIAD1189 | putative pseudouridine synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1187492 | 795 | - | 0.425157 |
NA | ACIAD3493 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3419180 | 423 | - | 0.423168 |
NA | ACIAD3245 | putative ATP-dependent RNA helicase | SubName: Full=Putative ATP-dependent RNA helicase; | chromosome | CDS | 3159264 | 1923 | - | 0.469059 |
NA | ACIAD0357 | putative tRNA/rRNA methyltransferase | RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; | chromosome | CDS | 350219 | 747 | + | 0.465863 |
NA | ACIAD3158 | putative tRNA-i(6)A37 modification enzyme (MiaB) | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 3085632 | 1452 | + | 0.415978 |
NA | ACIAD2933 | putative tRNA/rRNA methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 2862102 | 480 | - | 0.41875 |
NA | ACIAD1861 | hypothetical protein; putative signal peptide | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1857902 | 255 | + | 0.25098 |
NA | ACIAD0837 | conserved hypothetical protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 824367 | 933 | - | 0.448017 |
NA | ACIAD0272 | putative glutamyl t-RNA synthetase | RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; | chromosome | CDS | 272760 | 879 | - | 0.467577 |
NA | ACIAD0204 | putative cytidine and deoxycytidylate deaminase zinc-binding protein | SubName: Full=Putative cytidine and deoxycytidylate deaminase zinc-binding protein; | chromosome | CDS | 199469 | 555 | + | 0.472072 |
NA | ACIAD0208 | conserved hypothetical protein; putative Sua5/YciO/YrdC/YwlC family protein | RecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; | chromosome | CDS | 204236 | 579 | - | 0.450777 |
NA | ACIAD2151 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2132812 | 192 | - | 0.338542 |
NA | ACIAD3327 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3232037 | 384 | + | 0.393229 |
NA | ACIAD1640 | putative antigen | SubName: Full=Putative antigen; | chromosome | CDS | 1637223 | 846 | + | 0.3487 |
NA | ACIAD2698 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2656138 | 582 | + | 0.441581 |
NA | ACIAD2767 | putative siderophore biosynthesis protein; putative acetyltransferase | SubName: Full=Putative siderophore biosynthesis protein putative acetyltransferase; | chromosome | CDS | 2707493 | 588 | - | 0.348639 |
NA | ACIAD0117 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 118060 | 360 | + | 0.466667 |
NA | ACIAD2071 | putative GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 2054819 | 1104 | + | 0.431159 |
NA | ACIAD2576 | conserved hypothetical protein; putative tRNA hydroxylase | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2535595 | 690 | - | 0.428986 |
NA | ACIAD0476 | putative L-asparaginase I (AnsA) | SubName: Full=Putative L-asparaginase I (AnsA); EC=3.5.1.1; | chromosome | CDS | 468644 | 966 | - | 0.445135 |
NA | ACIAD0864 | putative acetyltransferase | SubName: Full=Putative acetyltransferase; | chromosome | CDS | 850965 | 705 | + | 0.407092 |
NA | ACIAD3083 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3009447 | 465 | + | 0.397849 |
NA | ACIAD0029 | conserved hypothetical protein | RecName: Full=Putative aminoacrylate peracid reductase RutC; EC=1.-.-.-; | chromosome | CDS | 35844 | 381 | + | 0.464567 |
NA | ACIAD2369 | putative nucleotidyl transferase | SubName: Full=Putative nucleotidyl transferase; | chromosome | CDS | 2326762 | 690 | - | 0.444928 |
NA | ACIAD2377 | putative pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2336684 | 915 | + | 0.379235 |
NA | ACIAD0658 | putative sigma(54) modulation protein RpoX | SubName: Full=Putative sigma(54) modulation protein RpoX; | chromosome | CDS | 653294 | 354 | + | 0.330508 |
NA | ACIAD2855 | conserved hypothetical protein | SubName: Full=Putative RNA-binding protein; | chromosome | CDS | 2792708 | 327 | + | 0.40367 |
NA | ACIAD0499 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 491855 | 279 | + | 0.390681 |
NA | ACIAD1850 | hypothetical protein; putative signal peptide | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1850856 | 255 | + | 0.25098 |
NA | ACIAD1371 | conserved hypothetical protein | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 1366542 | 1344 | + | 0.426339 |
NA | ACIAD2626 | putative tRNA/rRNA methyltransferase | SubName: Full=Putative tRNA/rRNA methyltransferase; EC=2.1.1.-; | chromosome | CDS | 2578714 | 801 | + | 0.398252 |
NA | ACIAD0865 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 851697 | 636 | - | 0.419811 |
NA | ACIAD2815 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2753611 | 450 | - | 0.344444 |
NA | ACIAD2090 | putative tRNA/rRNA methyltransferase | SubName: Full=Putative tRNA/rRNA methyltransferase; EC=2.1.1.-; | chromosome | CDS | 2075934 | 816 | + | 0.419118 |
NA | ACIAD2666 | putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA) | SubName: Full=Putative lysyl-tRNA synthetase (Lysine--tRNA ligase)(PoxA); EC=6.1.1.6; | chromosome | CDS | 2620294 | 990 | - | 0.420202 |
NA | ACIAD0861 | putative ribosomal large subunit pseudouridine synthase B (Pseudouridylate synthase) (Uracil hydrolyase) | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 848321 | 942 | - | 0.443737 |
NA | ACIAD1203 | putative ribosomal large subunit pseudouridine synthase A(RluA-like) | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 1203493 | 645 | + | 0.423256 |
NA | ACIAD2350 | putative deaminase | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 2312018 | 525 | - | 0.419048 |
NA | ACIAD2029 | putative adenine-specific methylase | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 2019245 | 1011 | - | 0.411474 |
NA | ACIAD3089 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3013912 | 492 | - | 0.382114 |
NA | ACIAD0222 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 222850 | 354 | - | 0.429379 |
NA | ACIAD2557 | conserved hypothetical protein; putative protein NifR3 family | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 2516779 | 1026 | - | 0.432749 |
NA | ACIAD2117 | putative siderophore biosynthese protein; putative acetyltransferase | SubName: Full=Putative siderophore biosynthese protein putative acetyltransferase; | chromosome | CDS | 2104707 | 660 | - | 0.337879 |
alaS | ACIAD1253 | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 1251196 | 2637 | - | 0.426242 |
amdA | ACIAD1618 | amidase | SubName: Full=Amidase; EC=3.5.1.4; | chromosome | CDS | 1615309 | 1515 | - | 0.417822 |
argS | ACIAD0164 | arginyl-tRNA synthetase | RecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; | chromosome | CDS | 162258 | 1791 | - | 0.434953 |
aspQ | ACIAD2088 | glutaminase-asparaginase | SubName: Full=Glutaminase-asparaginase; EC=3.5.1.38; | chromosome | CDS | 2071101 | 1068 | + | 0.416667 |
aspS | ACIAD0609 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 597289 | 1839 | - | 0.45242 |
cafA | ACIAD0830 | ribonuclease G, endoribonuclease G (cytoplasmic axial filament protein ) | SubName: Full=Ribonuclease G, endoribonuclease G (Cytoplasmic axial filament protein ); EC=3.1.4.-; | chromosome | CDS | 817525 | 1467 | + | 0.434901 |
cca | ACIAD2288 | tRNA nucleotidyl transferase | RecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; | chromosome | CDS | 2259572 | 1242 | + | 0.404187 |
cysS | ACIAD1481 | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 1479012 | 1422 | - | 0.414205 |
def | ACIAD0211 | peptide deformylase 1 (N-formylmethionylaminoacyl-tRNA deformylase, binds Zn(II)) | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 207295 | 525 | + | 0.417143 |
def2 | ACIAD1039 | peptide deformylase 2 | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 1029904 | 483 | + | 0.447205 |
dtd | ACIAD3563 | D-tyrosyl tRNA(tyr) deacylase | RecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; | chromosome | CDS | 3488548 | 441 | + | 0.424036 |
dusA | ACIAD3085 | tRNA-dihydrouridine synthase A | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 3011196 | 1026 | + | 0.431774 |
efp | ACIAD2206 | elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 2176269 | 579 | - | 0.409326 |
fmt | ACIAD3637 | methionyl-tRNA formyltransferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 3549771 | 960 | + | 0.4625 |
frr | ACIAD1373 | ribosome releasing factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 1368746 | 555 | + | 0.412613 |
ftsJ | ACIAD2854 | cell division protein (filamentous temperature sensitivity, 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent) | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 2791860 | 651 | - | 0.416283 |
fusA | ACIAD0884 | protein chain elongation factor EF-G, GTP-binding | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 866071 | 2139 | + | 0.431978 |
gatA | ACIAD0823 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 812576 | 1479 | - | 0.47735 |
gatB | ACIAD0822 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 811089 | 1488 | - | 0.455645 |
gatC | ACIAD0824 | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 814107 | 312 | - | 0.432692 |
glnS | ACIAD1920 | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; | chromosome | CDS | 1910414 | 1728 | - | 0.425926 |
gltX | ACIAD3371 | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 3280430 | 1509 | + | 0.446653 |
glyQ | ACIAD3268 | glycyl-tRNA synthetase, alpha chain | SubName: Full=Glycyl-tRNA synthetase, alpha chain; EC=6.1.1.14; | chromosome | CDS | 3181266 | 978 | + | 0.44683 |
glyS | ACIAD3269 | glycyl-tRNA synthetase, beta chain | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 3182243 | 2070 | + | 0.430435 |
gshB | ACIAD3518 | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; | chromosome | CDS | 3446262 | 945 | - | 0.445503 |
hemK | ACIAD2417 | methyl transferase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 2381237 | 825 | - | 0.424242 |
hisS | ACIAD0562 | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 553181 | 1293 | + | 0.438515 |
hslR | ACIAD1386 | heat shock protein 15 | RecName: Full=Heat shock protein 15; | chromosome | CDS | 1381899 | 444 | - | 0.378378 |
ileS | ACIAD0022 | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 26764 | 2838 | - | 0.448203 |
infA | ACIAD0472 | protein chain initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 466295 | 222 | - | 0.40991 |
infB | ACIAD0369 | protein chain initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 360876 | 2700 | + | 0.455185 |
infC | ACIAD3054 | protein chain initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 2980636 | 552 | - | 0.407609 |
ksgA | ACIAD3009 | S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase, kasugamycin resistance | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 2936886 | 825 | - | 0.460606 |
leuS | ACIAD3106 | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 3028827 | 2622 | + | 0.459191 |
lysS | ACIAD1069 | lysyl-tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; | chromosome | CDS | 1064137 | 1530 | + | 0.40719 |
map | ACIAD1987 | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 1977554 | 798 | - | 0.399749 |
map | ACIAD2271 | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 2240454 | 765 | + | 0.427451 |
miaA | ACIAD2374 | delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 2333168 | 945 | - | 0.394709 |
pcnB | ACIAD3063 | poly(A) polymerase I (PAP) | RecName: Full=Poly(A) polymerase I; Short=PAP I; EC=2.7.7.19; | chromosome | CDS | 2989112 | 1458 | - | 0.454047 |
pheS | ACIAD3042 | phenylalanyl-tRNA synthetase, alpha-subunit | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 2972798 | 993 | - | 0.438066 |
pnp | ACIAD0402 | polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase) | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 402324 | 2094 | + | 0.446514 |
prfA | ACIAD2418 | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 2382061 | 1131 | - | 0.435897 |
prfB | ACIAD3498 | peptide chain release factor 2 | RecName: Full=Peptide chain release factor 2; Short=RF-2; | chromosome | CDS | 3421705 | 1014 | - | 0.463511 |
prfC | ACIAD3095 | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 3020131 | 1590 | - | 0.438365 |
prmA | ACIAD2443 | methylation of 50S ribosomal subunit protein L11 (ribosomal protein L11 methyltransferase) | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 2408200 | 912 | + | 0.408991 |
proS | ACIAD0782 | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 768210 | 1713 | - | 0.440163 |
pth | ACIAD2909 | peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 2845826 | 582 | + | 0.426117 |
queA | ACIAD0591 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (Queuosine biosynthesis protein ) | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 580735 | 1035 | - | 0.423188 |
rbfA | ACIAD0370 | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 363575 | 402 | + | 0.445274 |
rhlB | ACIAD1314 | ATP-dependent RNA helicase (DEAD box) | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 1313277 | 1152 | + | 0.404514 |
rimM | ACIAD3312 | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 3218362 | 549 | - | 0.442623 |
rluA | ACIAD0715 | dual specificity pseudouridine synthase for 23S rRNA and tRNAphe modification | SubName: Full=Putative dual specificity pseudouridine synthase for 23S rRNA and tRNAphe modification (RluA-like); EC=4.2.1.70; | chromosome | CDS | 702056 | 660 | + | 0.428788 |
rluC | ACIAD0442 | 23S rRNA pseudouridylate synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 440160 | 933 | + | 0.457663 |
rluD | ACIAD2897 | ribosomal large subunit pseudouridine synthase D (Pseudouridylate synthase) (Uracil hydrolyase) | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2835028 | 1053 | - | 0.4283 |
rnd | ACIAD2310 | ribonuclease D, processes tRNA | SubName: Full=Ribonuclease D, processes tRNA; EC=3.1.26.3; | chromosome | CDS | 2276630 | 1197 | - | 0.383459 |
rne | ACIAD0438 | ribonuclease E (RNase E): endoribonuclease for rRNA processing and mRNA degradation | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 436009 | 3417 | - | 0.45976 |
rnpA | ACIAD3683 | RNase P, protein C5 component, processes tRNA, 4.5S RNA | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 3597604 | 396 | - | 0.411616 |
rph | ACIAD0050 | ribonuclease PH (RNase PH), tRNA nucleotidyltransferase | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 54008 | 756 | + | 0.44709 |
rplA | ACIAD0304 | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 300269 | 696 | + | 0.436782 |
rplB | ACIAD3216 | 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 3132311 | 825 | - | 0.467879 |
rplC | ACIAD3219 | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 3134078 | 639 | - | 0.472613 |
rplD | ACIAD3218 | 50S ribosomal protein L4, regulates expression of S10 operon | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 3133464 | 618 | - | 0.446602 |
rplE | ACIAD3207 | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 3128718 | 537 | - | 0.422719 |
rplF | ACIAD3204 | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 3127448 | 534 | - | 0.44382 |
rplI | ACIAD2432 | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 2397168 | 447 | + | 0.420582 |
rplJ | ACIAD0305 | 50S ribosomal protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 301204 | 537 | + | 0.411546 |
rplK | ACIAD0302 | 50S ribosomal protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 299837 | 429 | + | 0.431235 |
rplL | ACIAD0306 | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 301783 | 366 | + | 0.401639 |
rplM | ACIAD3012 | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 2938994 | 429 | + | 0.41958 |
rplN | ACIAD3209 | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 3129600 | 369 | - | 0.420054 |
rplO | ACIAD3200 | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 3125956 | 441 | - | 0.482993 |
rplP | ACIAD3212 | 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 3130510 | 414 | - | 0.44686 |
rplQ | ACIAD3193 | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 3121527 | 378 | - | 0.441799 |
rplR | ACIAD3203 | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 3127083 | 351 | - | 0.464387 |
rplS | ACIAD3310 | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 3217052 | 372 | - | 0.419355 |
rplT | ACIAD3046 | 50S ribosomal protein L20, also posttranslational autoregulator | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 2975691 | 360 | - | 0.477778 |
rplU | ACIAD2939 | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 2867551 | 312 | - | 0.439103 |
rplV | ACIAD3214 | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 3131681 | 333 | - | 0.429429 |
rplW | ACIAD3217 | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 3133147 | 321 | - | 0.395639 |
rplX | ACIAD3208 | 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 3129270 | 321 | - | 0.439252 |
rplY | ACIAD2908 | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; | chromosome | CDS | 2845494 | 312 | + | 0.448718 |
rpmA | ACIAD2938 | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 2867275 | 258 | - | 0.418605 |
rpmB | ACIAD0502 | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 494222 | 237 | - | 0.455696 |
rpmC | ACIAD3211 | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 3130313 | 198 | - | 0.424242 |
rpmD | ACIAD3201 | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 3126400 | 177 | - | 0.384181 |
rpmE | ACIAD2210 | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 2181828 | 225 | - | 0.404444 |
rpmE2 | ACIAD0425 | 50S ribosomal protein L31 type B | RecName: Full=50S ribosomal protein L31 type B; | chromosome | CDS | 423252 | 249 | - | 0.405622 |
rpmF | ACIAD0869 | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 853807 | 186 | + | 0.478495 |
rpmG | ACIAD0501 | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 494054 | 156 | - | 0.358974 |
rpmH | ACIAD3684 | 50S ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 3598023 | 135 | - | 0.474074 |
rpmI | ACIAD3047 | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 2976062 | 195 | - | 0.435897 |
rpmJ | ACIAD3198 | 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 3124454 | 117 | - | 0.401709 |
rpsA | ACIAD2347 | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 2309002 | 1674 | - | 0.422939 |
rpsB | ACIAD2269 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 2239436 | 750 | - | 0.429333 |
rpsC | ACIAD3213 | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 3130927 | 753 | - | 0.458167 |
rpsD | ACIAD3195 | 30S ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 3122949 | 624 | - | 0.418269 |
rpsE | ACIAD3202 | 30S ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 3126583 | 498 | - | 0.457831 |
rpsF | ACIAD2430 | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 2396534 | 387 | + | 0.387597 |
rpsG | ACIAD0883 | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 865423 | 471 | + | 0.443737 |
rpsH | ACIAD3205 | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 3127995 | 396 | - | 0.40404 |
rpsI | ACIAD3013 | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 2939435 | 387 | + | 0.439276 |
rpsJ | ACIAD3220 | 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 3134776 | 327 | - | 0.452599 |
rpsK | ACIAD3196 | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 3123585 | 387 | - | 0.490956 |
rpsL | ACIAD0881 | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 864888 | 375 | + | 0.429333 |
rpsM | ACIAD3197 | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 3123991 | 357 | - | 0.464986 |
rpsN | ACIAD3206 | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 3128403 | 306 | - | 0.428105 |
rpsO | ACIAD0401 | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 401802 | 270 | + | 0.422222 |
rpsP | ACIAD3313 | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 3218930 | 258 | - | 0.457364 |
rpsQ | ACIAD3210 | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 3130059 | 258 | - | 0.430233 |
rpsR | ACIAD2431 | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 2396932 | 228 | + | 0.442982 |
rpsS | ACIAD3215 | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 3132022 | 276 | - | 0.438406 |
rpsT | ACIAD1389 | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 1384664 | 270 | - | 0.403704 |
rpsU | ACIAD1331 | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21; | chromosome | CDS | 1328406 | 216 | - | 0.453704 |
rsmC | ACIAD0701 | ribosomal RNA small subunit methyltransferase C (rRNA (guanine-N(2)-)-methyltransferase) (16S rRNA m2G1207 methyltransferase) | RecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; | chromosome | CDS | 687674 | 1017 | - | 0.416912 |
rsuA | ACIAD2380 | 16S rRNA pseudouridylate 516 synthase | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 2338567 | 720 | - | 0.370833 |
rumA | ACIAD3069 | 23S rRNA (Uracil-5-)-methyltransferase(23S rRNA(M-5-U1939)-methyltransferase) | RecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; | chromosome | CDS | 2995133 | 1392 | - | 0.413075 |
serS | ACIAD2935 | seryl-tRNA synthetase ; also charges selenocystein tRNA with serine | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 2864057 | 1278 | - | 0.443662 |
smpA | ACIAD0909 | outer membrane lipoprotein | RecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; | chromosome | CDS | 891218 | 399 | - | 0.411028 |
sun | ACIAD3638 | 16S rRNA m5C967 SAM-dependent methyltransferase | SubName: Full=16S rRNA m5C967 SAM-dependent methyltransferase; | chromosome | CDS | 3550727 | 1305 | + | 0.450575 |
tgt | ACIAD0590 | queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) (Guanine insertion enzyme) | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 579286 | 1161 | - | 0.464255 |
thrS | ACIAD3055 | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; | chromosome | CDS | 2981193 | 1923 | - | 0.430577 |
trmA | ACIAD1645 | tRNA (uracil-5-)-methyltransferase | RecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; | chromosome | CDS | 1640614 | 1086 | - | 0.380295 |
trmD | ACIAD3311 | tRNA (guanine-1-)-methyltransferase. | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 3217565 | 750 | - | 0.428 |
trmU | ACIAD1221 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 1224194 | 1134 | - | 0.424162 |
trpS | ACIAD2871 | tryptophanyl-tRNA synthetase | SubName: Full=Tryptophanyl-tRNA synthetase; EC=6.1.1.2; | chromosome | CDS | 2811122 | 1014 | + | 0.420118 |
truA | ACIAD0474 | tRNA-pseudouridine synthase I | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 467810 | 816 | - | 0.466912 |
truB | ACIAD3307 | tRNA pseudouridine 55 synthase | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 3213800 | 957 | - | 0.424242 |
tsf | ACIAD2268 | protein chain elongation factor EF-Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 2238425 | 876 | - | 0.39726 |
tufA | ACIAD0885 | protein chain elongation factor EF-Tu (duplicate of tufB) | RecName: Full=Elongation factor Tu; AltName: Full=EF-Tu 1; | chromosome | CDS | 868262 | 1230 | + | 0.465041 |
tufB | ACIAD0299 | protein chain elongation factor EF-Tu, possible GTP-binding factor (duplicate of tufA) | RecName: Full=Elongation factor Tu; AltName: Full=EF-Tu 1; | chromosome | CDS | 297344 | 1191 | + | 0.464316 |
tyrS | ACIAD0013 | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 13646 | 1215 | + | 0.453498 |
valS | ACIAD2950 | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 2880692 | 2916 | + | 0.469136 |