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2024-05-05 22:38:12

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Desulfotalea psychrophila LSv54, LSv54

Number of genes found: 184

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Desulfotalea psychrophila LSv54, LSv54
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DP1331 probable asparaginyl-tRNA synthetasechromosome CDS1485634 1350 + 0.508148
NA DP2859 related to tRNA/rRNA methyltransferasechromosome CDS3231801 888 - 0.493243
NA DP0018 hypothetical proteinchromosome CDS17641 768 - 0.385417
NA DP0124 related to SUN protein (FMU protein)chromosome CDS136923 1365 + 0.485714
NA DP2757 related to ribosomal large subunit pseudouridine synthase Dchromosome CDS3123295 717 - 0.460251
NA DP1923 unknown proteinchromosome CDS2175786 564 + 0.443262
NA DP1120 probable 30S ribosomal protein S7chromosome CDS1268463 474 + 0.447257
NA DP2602 tRNA-dihydrouridine synthasechromosome CDS2958122 987 + 0.507599
NA DP2392 probable ribosomal protein S6 modification protein (RimK)chromosome CDS2733468 1395 + 0.482437
NA DP2752 probable arginyl-tRNA synthetasechromosome CDS3118767 1659 - 0.466546
NA DP1121 probable translation elongation factor EF-Gchromosome CDS1268999 2079 + 0.449735
NA DP1126 probable 50S ribosomal protein L23chromosome CDS1273940 288 + 0.402778
NA DP0644 related to Glu-tRNA(Gln) amidotransferase, subunit Cchromosome CDS706298 285 - 0.396491
NA DP0643 probable glutamyl-tRNA(Gln) amidotransferase, subunit Achromosome CDS704779 1458 - 0.484911
NA DP1122 probable translation elongation factor EF-Tuchromosome CDS1271102 1191 + 0.458438
NA DP1129 probable 50S ribosomal protein L22chromosome CDS1275466 333 + 0.435435
NA DP0361 conserved hypothetical proteinchromosome CDS389948 360 - 0.472222
NA DP0820 related to ribosomal large subunit pseudouridine synthase Bchromosome CDS919963 690 - 0.478261
NA DP1969 probable glucose-inhibited division proteinchromosome CDS2235959 1335 + 0.498876
NA DP1132 probable 50S ribosomal protein L29chromosome CDS1276945 222 + 0.369369
NA DP1153 probable 50S ribosomal protein L17chromosome CDS1287322 390 + 0.453846
NA DP1930 probable tRNA delta-2-isopentenylpyrophosphate transferase (TrpX)chromosome CDS2191720 945 - 0.486772
NA DP2327 conserved hypothetical proteinchromosome CDS2657645 963 - 0.558671
NA DP3109 probable ribosomal large subunit pseudouridine synthase Achromosome CDS3509142 636 + 0.514151
NA DP0524 unknown proteinchromosome CDS571648 303 - 0.465347
NA DP1136 probable 50S ribosomal protein L5chromosome CDS1278337 540 + 0.411111
NA DP0118 probable glycyl-tRNA synthetase, alpha chainchromosome CDS129502 873 + 0.490263
NA DP1119 probable 30S ribosomal protein S12chromosome CDS1268067 375 + 0.432
NA DP1131 probable 50S ribosomal protein L16chromosome CDS1276562 417 + 0.450839
NA DP2046 unknown proteinchromosome CDS2325861 621 + 0.338164
NA DP2600 probable leucyl-tRNA synthetasechromosome CDS2954991 2484 + 0.497182
NA DP1141 probable 50S ribosomal protein L18chromosome CDS1280181 366 + 0.456284
NA DP1146 probable methionine aminopeptidasechromosome CDS1283177 783 + 0.452107
NA DP2307 hypothetical proteinchromosome CDS2641402 519 + 0.479769
NA DP1134 probable 50S ribosomal protein L14chromosome CDS1277553 369 + 0.457995
NA DP1508 probable translation initiation inhibitorchromosome CDS1677892 396 + 0.431818
NA DP2923 probable bifunctional GlmU proteinchromosome CDS3305629 798 + 0.496241
NA DP1428 probable threonyl-tRNA synthetasechromosome CDS1592855 1974 - 0.464032
NA DP2910 related to poly(A) polymerasechromosome CDS3289959 1506 - 0.537849
NA DP1123 probable 30S ribosomal protein S10chromosome CDS1272300 318 + 0.40566
NA DP1932 probable rRNA methylase homolog (CspR)chromosome CDS2193248 498 + 0.445783
NA DP1324 related to tRNA pseudouridine synthase Achromosome CDS1479920 756 - 0.482804
NA DP1139 probable 50S ribosomal protein L6chromosome CDS1279586 171 + 0.450292
NA DP2591 probable 50S ribosomal protein L27chromosome CDS2948812 261 - 0.467433
NA DP2581 related to cytoplasmic axial filament protein (ribonuclease G)chromosome CDS2936092 1557 + 0.450225
NA DP0994 related to L-asparaginasechromosome CDS1120811 1098 - 0.521858
NA DP0846 probable lysyl-tRNA synthetasechromosome CDS948943 903 + 0.528239
NA DP1116 probable 50S ribosomal protein L7 /L12chromosome CDS1258776 372 + 0.448925
NA DP1940 hypothetical proteinchromosome CDS2202038 495 - 0.488889
NA DP3022 unknown proteinchromosome CDS3419849 342 + 0.447368
NA DP0782 probable GTP-binding protein (YchF)chromosome CDS879477 1098 + 0.467213
NA DP2354 probable cytosine deaminasechromosome CDS2687503 438 - 0.518265
NA DP1138 probable 30S ribosomal protein S8, N-terminal fragmentchromosome CDS1279164 234 + 0.388889
NA DP2725 related to HemK methylasechromosome CDS3087191 876 - 0.510274
NA DP0242 unknown proteinchromosome CDS257529 1287 - 0.358974
NA DP1326 probable 30S ribosomal protein S9chromosome CDS1482029 393 - 0.414758
NA DP0183 unknown proteinchromosome CDS198480 243 - 0.485597
NA DP1425 probable 50S ribosomal protein L20chromosome CDS1591210 357 - 0.484594
NA DP1629 probable lysyl-tRNA synthetasechromosome CDS1813751 1512 - 0.511905
NA DP1476 related to cytidine and deoxycytidylate deaminase family proteinchromosome CDS1648691 510 + 0.537255
NA DP0570 probable aspartyl-tRNA synthetasechromosome CDS624573 1824 - 0.48739
NA DP1327 probable 50S ribosomal protein L13chromosome CDS1482438 429 - 0.428904
NA DP2175 related to dimethyladenosine transferasechromosome CDS2495552 888 + 0.467342
NA DP1384 conserved hypothetical proteinchromosome CDS1546188 378 - 0.42328
NA DP2956 conserved hypothetical proteinchromosome CDS3345602 1305 + 0.505747
NA DP0713 unknown proteinchromosome CDS789337 537 + 0.471136
NA DP1137 probable 30S ribosomal protein S14chromosome CDS1278921 186 + 0.446237
NA DP1439 conserved hypothetical proteinchromosome CDS1605960 501 + 0.53493
NA DP2911 conserved hypothetical proteinchromosome CDS3291564 957 + 0.496343
NA DP2726 probable peptide chain release factor 1 (RF-1)chromosome CDS3088150 1074 - 0.450652
NA DP2240 probable methionine aminopeptidase, MAPchromosome CDS2576035 753 - 0.456839
NA DP3008 probable RNAse Echromosome CDS3404012 2652 - 0.508296
NA DP1151 probable 30S ribosomal protein S4chromosome CDS1285440 633 + 0.417062
NA DP2909 related to ribosomal RNA methyltransferase (FtsJ)chromosome CDS3289178 606 - 0.463696
NA DP0120 conserved hypothetical proteinchromosome CDS131731 450 + 0.46
NA DP2843 probable S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS3209910 1077 + 0.493036
NA DP0007 probable translation elongation factor EF-Gchromosome CDS5662 2088 - 0.453065
NA DP1133 probable 30S ribosomal protein S17chromosome CDS1277233 261 + 0.40613
NA DP2732 related to peptidyl-tRNA hydrolase (PTH)chromosome CDS3094033 648 - 0.449074
NA DP1443 related to RNA-methyltransferasechromosome CDS1612233 1335 - 0.496629
NA DP0628 conserved hypothetical proteinchromosome CDS685508 1581 - 0.480076
NA DP2612 related to ribosome-binding factor Achromosome CDS2968469 423 - 0.425532
NA DP1150 probable 30S ribosomal protein S11chromosome CDS1285012 381 + 0.430446
NA DP1144 probable 50S ribosomal protein L15chromosome CDS1281313 471 + 0.467091
NA DP1927 conserved hypothetical proteinchromosome CDS2186684 1344 - 0.47619
NA DP1413 related to ATP-dependent RNA helicasechromosome CDS1578578 1275 - 0.450196
NA DP1125 probable 50S ribosomal protein L4chromosome CDS1273308 636 + 0.430818
NA DP0571 probable histidyl-tRNA synthetasechromosome CDS626400 1290 - 0.483721
NA DP1486 probable glycyl-tRNA synthetase, beta subunitchromosome CDS1656543 2070 + 0.492271
NA DP2610 probable tRNA pseudouridine synthase Bchromosome CDS2966727 741 - 0.464238
NA DP2847 related to 30S ribosomal protein S1chromosome CDS3213437 1191 + 0.512175
NA DP0899 probable 30S ribosomal protein S1chromosome CDS1012514 1713 + 0.464098
NA DP1155 probable elongation factor Tschromosome CDS1289079 591 + 0.424704
NA DP2398 probable elongation factor Gchromosome CDS2737351 2058 - 0.480564
NA DP0819 probable ribosomal large subunit pseudouridine synthase Bchromosome CDS919641 393 - 0.493639
NA DP2738 probable glutaminyl-tRNA synthetasechromosome CDS3099858 1710 + 0.515205
NA DP2592 probable 50S ribosomal protein L21chromosome CDS2949120 312 - 0.426282
NA DP1683 probable 50S ribosomal protein L28chromosome CDS1884823 234 + 0.41453
NA DP0598 unknown proteinchromosome CDS655527 354 - 0.423729
NA DP1157 probable ribosome recycling factorchromosome CDS1290533 555 + 0.443243
NA DP1678 conserved hypothetical proteinchromosome CDS1880681 348 + 0.436782
NA DP2965 conserved hypothetical proteinchromosome CDS3355028 1083 - 0.497692
NA DP1878 conserved hypothetical proteinchromosome CDS2112877 390 - 0.497436
NA DP2933 probable selenocysteine-specific elongation factor (SelB)chromosome CDS3318179 1932 - 0.514493
NA DP1135 probable 50S ribosomal protein L24chromosome CDS1277973 336 + 0.434524
NA DP2805 probable 50S ribosomal protein L19chromosome CDS3162758 354 + 0.466102
NA DP2730 related to ribosomal large subunit pseudouridine synthase Dchromosome CDS3092137 984 - 0.489837
NA DP2733 related to 50S ribosomal protein L25chromosome CDS3094726 552 - 0.431159
NA DP2800 probable 30S ribosomal protein S16chromosome CDS3160334 246 + 0.418699
NA DP0898 related to ATP-dependent RNA helicase (RhlE)chromosome CDS1010645 1497 + 0.493654
NA DP0573 probable polyA polymerasechromosome CDS628938 1494 + 0.478581
NA DP0907 probable queuine tRNA-ribosyltransferasechromosome CDS1021680 804 + 0.462687
NA DP1644 probable tryptophanyl-tRNA ligasechromosome CDS1837449 978 + 0.47137
NA DP2802 related to 16S rRNA processing protein RimMchromosome CDS3161026 339 + 0.40118
NA DP1613 probable heat shock protein Hsp15chromosome CDS1798534 393 + 0.506361
NA DP1143 related to 50S ribosomal protein L30chromosome CDS1281141 183 + 0.420765
NA DP0936 probable ATP-dependent RNA helicasechromosome CDS1048796 1272 - 0.507862
NA DP2414 related to hemolysin Achromosome CDS2756652 729 + 0.513032
NA DP1618 probable 30S ribosomal protein S20chromosome CDS1803453 270 + 0.47037
NA DP1115 related to 50S ribosomal protein L10chromosome CDS1258198 528 + 0.456439
NA DP1809 probable peptide chain release factor 2chromosome CDS2042086 858 - 0.502331
NA DP1130 probable 30S ribosomal protein S3chromosome CDS1275865 654 + 0.457187
NA DP2797 related to ribonuclease Dchromosome CDS3157211 1125 + 0.463111
NA DP0040 related to acetyltransferasechromosome CDS40810 528 - 0.357955
NA DP1128 probable 30S ribosomal protein S19chromosome CDS1275139 276 + 0.391304
NA DP2737 related to glutamyl-tRNA synthetasechromosome CDS3098303 1509 + 0.50497
NA DP2017 unknown proteinchromosome CDS2299047 648 + 0.361111
NA DP2187 hypothetical proteinchromosome CDS2506658 657 - 0.468798
NA DP2361 unknown proteinchromosome CDS2695676 564 + 0.423759
NA DP2595 similar to 30S ribosomal protein S6chromosome CDS2950979 480 + 0.43125
NA DP2819 probable peptide chain release factor 3chromosome CDS3178223 1587 + 0.478261
NA DP1149 probable 30S ribosomal protein S13chromosome CDS1284540 366 + 0.464481
NA DP2608 probable polyribonucleotide nucleotidyltransferasechromosome CDS2963987 2079 - 0.464165
NA DP1426 probable 50S ribosomal protein L35chromosome CDS1591668 222 - 0.378378
NA DP1114 probable 50S ribosomal protein L1chromosome CDS1257312 708 + 0.411017
NA DP1504 probable translation initiation inhibitorchromosome CDS1674179 396 + 0.441919
NA DP2941 related to mannose-1-phosphate guanylyltransferasechromosome CDS3328644 918 - 0.51634
NA DP2400 conserved hypothetical proteinchromosome CDS2741825 1065 - 0.501408
NA DP1273 probable ribonuclease PHchromosome CDS1419761 711 + 0.555556
NA DP0901 conserved hypothetical proteinchromosome CDS1014623 612 - 0.444444
NA DP0489 conserved hypothetical proteinchromosome CDS519147 366 - 0.494536
NA DP1976 probable ATP-independent RNA helicase (DbpA)chromosome CDS2243011 1410 - 0.520567
NA DP2727 probable ribosomal protein L31chromosome CDS3089457 222 - 0.414414
NA DP0817 conserved hypothetical proteinchromosome CDS917510 1332 + 0.48048
NA DP2869 probable tyrosyl-tRNA synthetasechromosome CDS3239848 1218 - 0.471264
NA DP1124 probable 50S ribosomal protein L3chromosome CDS1272657 630 + 0.434921
NA DP0908 hypothetical proteinchromosome CDS1022503 306 + 0.415033
NA DP0854 related to Ribonuclease P, protein componentchromosome CDS960798 363 + 0.46281
NA DP2803 probable tRNA (guanine-N1)-methyltransferasechromosome CDS3161369 756 + 0.414021
NA DP1164 probable prolyl-tRNA synthetasechromosome CDS1297122 1713 + 0.499124
NA DP1113 probable 50S ribosomal protein L11chromosome CDS1256757 426 + 0.441315
NA DP1427 probable translation initiation factor IF-3chromosome CDS1592072 429 - 0.412587
NA DP0459 related to pseudouridine synthasechromosome CDS486211 693 + 0.484848
NA DP1140 probable 50S ribosomal protein L6chromosome CDS1279811 321 + 0.401869
NA DP1424 probable phenylalanyl-tRNA synthetase, alpha chainchromosome CDS1589978 1017 - 0.471976
NA DP0236 hypothetical proteinchromosome CDS251813 483 + 0.405797
NA DP2613 probable translation initiation factor IF-2chromosome CDS2968900 2820 - 0.484752
NA DP1690 probable ATP-dependent RNA helicasechromosome CDS1892197 1899 + 0.45445
NA DP3024 related to pseudouridine synthasechromosome CDS3422564 708 + 0.467514
NA DP0746 probable peptide deformylasechromosome CDS843499 510 + 0.429412
NA DP1764 probable seryl-tRNA synthetasechromosome CDS1988041 1278 + 0.472613
NA DP0693 related to methyltransferasechromosome CDS766988 903 + 0.473976
NA DP2712 conserved hypothetical membrane proteinchromosome CDS3073096 1080 - 0.52037
NA DP3118 conserved hypothetical proteinchromosome CDS3522679 417 + 0.513189
NA DP1147 probable translation initiation factor IF-1chromosome CDS1284106 252 + 0.376984
NA DP2552 probable isoleucyl-tRNA synthetasechromosome CDS2906404 2820 - 0.479078
NA DP0845 probable elongation factor Pchromosome CDS948375 564 + 0.414894
NA DP1127 probable 50S ribosomal protein L2chromosome CDS1274300 822 + 0.441606
NA DP2242 putative translation initiation inhibitorchromosome CDS2579274 354 + 0.474576
NA DP0828 probable alanyl-tRNA synthetasechromosome CDS931761 2649 + 0.514534
NA DP2023 unknown proteinchromosome CDS2304260 522 - 0.463602
NA DP1109 probable elongation factor Tuchromosome CDS1254233 1191 + 0.468514
NA DP2356 related to tRNA pseudouridine synthase Achromosome CDS2689285 786 - 0.483461
NA DP1148 probable ribosomal protein L36chromosome CDS1284363 123 + 0.365854
NA DP0714 probable glutamyl-tRNA(Gln) amidotransferase, subunit Bchromosome CDS789899 1443 + 0.476784
NA DP0747 probable methionyl-tRNA formyltransferasechromosome CDS843990 972 + 0.498971
NA DP2928 probable cysteinyl-tRNA synthetasechromosome CDS3312632 1470 + 0.498639
NA DP1142 probable 30S ribosomal protein S5chromosome CDS1280571 516 + 0.422481
NA DP2955 probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS3344547 1035 + 0.474396
NA DP1796 probable valyl-tRNA synthetasechromosome CDS2026735 2664 - 0.50976
NA DP1154 probable 30S ribosomal protein S2chromosome CDS1288033 723 + 0.428769
NA DP2609 probable 30S ribosomal protein S15chromosome CDS2966260 270 - 0.414815
NA DP2598 related to 50S ribosomal protein L9chromosome CDS2952774 456 + 0.438596
NA DP2596 probable 30S ribosomal protein S18chromosome CDS2951484 246 + 0.426829