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2024-04-29 18:01:56

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Thermobifida fusca YX, YX

Number of genes found: 155

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Thermobifida fusca YX, YX
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Tfu_1191 RNA binding S1chromosome CDS1389156 1458 + 0.635802
NA Tfu_1206 pseudouridine synthase, Rsuchromosome CDS1407441 1128 + 0.68883
NA Tfu_0213 RNA methyltransferase TrmH, group 3chromosome CDS242293 975 + 0.695385
NA Tfu_1572 conserved hypothetical proteinchromosome CDS1810236 1227 + 0.668297
NA Tfu_1726 formylmethionine deformylasechromosome CDS2007078 666 - 0.654655
NA Tfu_2620 putative ribosomal protein S13chromosome CDS3094333 381 - 0.669291
NA Tfu_2492 sigma 54 modulation protein/ribosomal protein S30EAchromosome CDS2935607 681 - 0.660793
NA Tfu_0660 hypothetical proteinchromosome CDS766005 1197 + 0.675021
NA Tfu_2086 aspartyl-tRNA synthetase bacterial/mitochondrial typechromosome CDS2446953 1740 - 0.674713
NA Tfu_1927 23S rRNA methyltransferase/RumAchromosome CDS2255884 1260 - 0.73254
NA Tfu_2621 Ribosomal protein L36chromosome CDS3094921 114 - 0.587719
NA Tfu_0666 Ribosomal protein L19chromosome CDS771668 345 + 0.66087
NA Tfu_0759 histidine--tRNA ligasechromosome CDS899319 1317 - 0.66287
NA Tfu_1684 probable tRNA/rRNA methyltransferasechromosome CDS1957573 555 + 0.681081
NA Tfu_0815 tRNA isopentenyltransferasechromosome CDS963662 960 - 0.705208
NA Tfu_2635 Ribosomal protein L24chromosome CDS3102789 306 - 0.601307
NA Tfu_0031 seryl-tRNA synthetase, class IIachromosome CDS35195 1269 - 0.672971
NA Tfu_2070 alanyl-tRNA synthetase, class IIcchromosome CDS2423584 2670 - 0.682022
NA Tfu_0676 Ribosomal protein S2, bacterial and organelle formchromosome CDS780242 879 + 0.651877
NA Tfu_1120 isoleucyl-tRNA synthetase, class Iachromosome CDS1305238 3183 - 0.677977
NA Tfu_2649 translation elongation factor G:Small GTP-binding protein domainchromosome CDS3110379 2115 - 0.632624
NA Tfu_2289 hypothetical proteinchromosome CDS2692185 1344 + 0.669643
NA Tfu_1076 putative RNA-binding Sun proteinchromosome CDS1257699 1431 + 0.733054
NA Tfu_2667 Ribosomal protein L33chromosome CDS3135164 165 - 0.636364
NA Tfu_0623 glutamyl-tRNA synthetase bacterial/mitochondrialchromosome CDS724678 1434 + 0.679219
NA Tfu_0514 helicase, C-terminal:DEAD/DEAH box helicase, N-terminalchromosome CDS581156 1512 - 0.68254
NA Tfu_2629 Ribosomal protein S5, bacterial and organelle formchromosome CDS3099790 603 - 0.688226
NA Tfu_2619 30S ribosomal protein S11chromosome CDS3093864 405 - 0.68642
NA Tfu_2647 Ribosomal protein S10, bacterial formchromosome CDS3108608 309 - 0.614887
NA Tfu_1394 mannose-1-phosphate guanylyltransferase / phosphomannomutasechromosome CDS1614959 2499 + 0.667467
NA Tfu_2632 putative ribosomal protein S8chromosome CDS3101385 399 - 0.611529
NA Tfu_2630 Ribosomal protein L18chromosome CDS3100442 387 - 0.697674
NA Tfu_2651 Ribosomal protein S12, bacterial and chloroplast formchromosome CDS3113010 372 - 0.629032
NA Tfu_2143 putative guanyltransferasechromosome CDS2510353 723 - 0.651452
NA Tfu_1936 valyl-tRNA synthetasechromosome CDS2264061 2646 - 0.677627
NA Tfu_0417 peptidyl-tRNA hydrolasechromosome CDS469518 642 + 0.67757
NA Tfu_2658 Ribosomal protein L11, bacterialchromosome CDS3127222 429 - 0.634033
NA Tfu_2616 tRNA pseudouridine synthasechromosome CDS3091194 891 - 0.721661
NA Tfu_1806 conserved hypothetical proteinchromosome CDS2105494 951 + 0.613039
NA Tfu_1832 cysteine--tRNA ligasechromosome CDS2136909 1239 - 0.712672
NA Tfu_1093 elongation factor Pchromosome CDS1274418 594 + 0.626263
NA Tfu_0780 ribosome-binding factor Achromosome CDS922687 456 + 0.677632
NA Tfu_0778 initiation factor 2:Small GTP-binding protein domainchromosome CDS919401 2868 + 0.695607
NA Tfu_0737 hypothetical proteinchromosome CDS866319 1158 + 0.708981
NA Tfu_0377 ribosomal-protein-alanine N-acetyltransferasechromosome CDS421462 666 + 0.657658
NA Tfu_1683 conserved hypothetical proteinchromosome CDS1956902 618 + 0.711974
NA Tfu_0784 polyribonucleotide nucleotidyltransferasechromosome CDS926033 2304 + 0.673611
NA Tfu_2449 tRNA/rRNA methyltransferasechromosome CDS2876654 684 + 0.663743
NA Tfu_1642 RNA-binding S4chromosome CDS1909636 444 - 0.707207
NA Tfu_1440 helicase, C-terminal:DEAD/DEAH box helicase, N-terminalchromosome CDS1666098 1689 + 0.680876
NA Tfu_2640 ribosomal protein S3chromosome CDS3104538 813 - 0.680197
NA Tfu_2627 Ribosomal protein L15, bacterial formchromosome CDS3099155 450 - 0.637778
NA Tfu_3093 Ribosomal protein S18chromosome CDS3614393 237 - 0.624473
NA Tfu_0650 Ribosomal protein S32, bacterial and organelle formchromosome CDS753347 177 + 0.683616
NA Tfu_0662 Ribosomal protein S16chromosome CDS769177 441 + 0.646259
NA Tfu_2065 ribosomal protein L35chromosome CDS2418767 192 - 0.619792
NA Tfu_2182 Ribosomal protein L21chromosome CDS2562691 372 - 0.583333
NA Tfu_2613 30S ribosomal protein S9chromosome CDS3087508 510 - 0.662745
NA Tfu_0212 cysteinyl-tRNA synthetase, class Iachromosome CDS240817 1401 + 0.690221
NA Tfu_0416 Ribosomal protein L25chromosome CDS468906 585 + 0.683761
NA Tfu_0597 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS686385 1092 + 0.693223
NA Tfu_0783 Ribosomal protein S15, bacterial chloroplast and mitochondrial typechromosome CDS925349 270 + 0.633333
NA Tfu_2656 putative ribosomal protein L10chromosome CDS3125432 528 - 0.660985
NA Tfu_0238 conserved hypothetical proteinchromosome CDS266788 1485 - 0.708418
NA Tfu_2922 d-tyrosyl-tRNA(Tyr) deacylasechromosome CDS3437368 426 + 0.673709
NA Tfu_3095 Ribosomal protein S6chromosome CDS3615289 291 - 0.62543
NA Tfu_0389 methionyl-tRNA synthetase, class Iachromosome CDS434465 1821 + 0.656233
NA Tfu_2417 Sua5/YciO/YrdC/YwlCchromosome CDS2837268 780 - 0.696154
NA Tfu_2872 conserved hypothetical proteinchromosome CDS3381982 540 + 0.640741
NA Tfu_2066 initiation factor 3chromosome CDS2419136 540 - 0.648148
NA Tfu_1961 Sua5/YciO/YrdC/YwlCchromosome CDS2293556 1008 + 0.724206
NA Tfu_2636 Ribosomal protein L14, bacterial and organelle formchromosome CDS3103098 369 - 0.647696
NA Tfu_2645 50S ribosomal protein L4chromosome CDS3107271 669 - 0.666667
NA Tfu_1812 hypothetical proteinchromosome CDS2112531 387 - 0.679587
NA Tfu_2641 Ribosomal protein L22, bacterial and organelle formchromosome CDS3105350 378 - 0.666667
NA Tfu_2881 lysyl-tRNA synthetase, class-2chromosome CDS3394865 1491 - 0.647217
NA Tfu_2631 putative ribosomal protein L6chromosome CDS3100831 537 - 0.629423
NA Tfu_0405 RRNA 16S rRNA dimethylasechromosome CDS455398 864 + 0.734954
NA Tfu_0736 conserved hypothetical proteinchromosome CDS864720 1029 + 0.669582
NA Tfu_0605 glutamyl-tRNA(Gln) amidotransferase C subunitchromosome CDS697352 300 + 0.683333
NA Tfu_0811 Protein of unknown function UPF0004:tRNA-i(6)A37 modification enzyme MiaBchromosome CDS958055 1485 + 0.678788
NA Tfu_0827 Ribosomal protein S20pchromosome CDS979737 279 - 0.623656
NA Tfu_2063 putative rRNA methylasechromosome CDS2417380 828 - 0.667874
NA Tfu_2643 Ribosomal protein L2, bacterial and organelle formchromosome CDS3106097 834 - 0.68705
NA Tfu_2642 Ribosomal protein S19, bacterial and organelle formchromosome CDS3105806 279 - 0.620072
NA Tfu_0645 Ribosomal protein L28chromosome CDS748471 189 - 0.640212
NA Tfu_2419 peptide chain release factor 1chromosome CDS2838943 1068 - 0.672285
NA Tfu_0679 ribosome recycling factorchromosome CDS782961 558 + 0.630824
NA Tfu_2655 Ribosomal protein L7/L12chromosome CDS3124907 393 - 0.64631
NA Tfu_2358 hypothetical proteinchromosome CDS2774442 399 - 0.666667
NA Tfu_2614 Ribosomal protein L13, bacterial and organelle formchromosome CDS3088051 450 - 0.637778
NA Tfu_1723 conserved hypothetical proteinchromosome CDS2005278 492 - 0.707317
NA Tfu_2108 threonyl-tRNA synthetase, class IIachromosome CDS2468083 1980 - 0.663131
NA Tfu_2637 putative ribosomal protein S17chromosome CDS3103590 276 - 0.612319
NA Tfu_2638 Ribosomal protein L29chromosome CDS3103862 258 - 0.589147
NA Tfu_0473 Conserved hypothetical protein 92chromosome CDS534199 1095 + 0.648402
NA Tfu_2426 similar to Arginyl-tRNA synthetasechromosome CDS2848025 1251 - 0.742606
NA Tfu_2264 putative rRNA methylasechromosome CDS2666750 807 - 0.686493
NA Tfu_2420 Ribosomal protein L31chromosome CDS2840098 210 - 0.614286
NA Tfu_1013 Ribosomal protein S4, bacterial and organelle formchromosome CDS1187971 612 + 0.666667
NA Tfu_1190 conserved hypothetical proteinchromosome CDS1388318 429 + 0.694639
NA Tfu_0027 putative deaminasechromosome CDS31030 453 + 0.699779
NA Tfu_3092 Ribosomal protein L9chromosome CDS3613920 447 - 0.673378
NA Tfu_2183 ribonuclease E and Gchromosome CDS2563229 2727 - 0.678768
NA Tfu_0085 conserved hypothetical proteinchromosome CDS107759 456 + 0.666667
NA Tfu_2156 leucyl-tRNA synthetase bacterial/mitochondrial, class Iachromosome CDS2526315 2493 - 0.669073
NA Tfu_2181 Ribosomal protein L27chromosome CDS2562409 267 - 0.64794
NA Tfu_0243 2',5' RNA ligasechromosome CDS272275 549 + 0.728597
NA Tfu_2433 formylmethionine deformylasechromosome CDS2858555 558 + 0.68638
NA Tfu_0861 glycyl-tRNA synthetase, alpha2 dimerchromosome CDS1013492 1389 + 0.655148
NA Tfu_0795 Conserved hypothetical proteinchromosome CDS940868 1452 + 0.67562
NA Tfu_1061 conserved hypothetical proteinchromosome CDS1241467 318 + 0.666667
NA Tfu_2207 amidasechromosome CDS2595723 1431 - 0.7058
NA Tfu_2622 translation initiation factor IF-1chromosome CDS3095097 222 - 0.558559
NA Tfu_2633 putative ribosomal protein S14chromosome CDS3102018 186 - 0.672043
NA Tfu_1810 tRNA (adenine-N(1)-)-methyltransferasechromosome CDS2110624 897 - 0.664437
NA Tfu_2639 Ribosomal protein L16chromosome CDS3104119 417 - 0.647482
NA Tfu_2376 tryptophanyl-tRNA synthetase, class Ibchromosome CDS2798120 1011 - 0.65183
NA Tfu_1075 methionyl-tRNA formyltransferasechromosome CDS1256678 933 + 0.72776
NA Tfu_1548 hypothetical proteinchromosome CDS1784707 474 - 0.616034
NA Tfu_1123 pseudouridine synthase, RluDchromosome CDS1309858 930 + 0.695699
NA Tfu_2479 peptide chain release factor 2chromosome CDS2917347 1128 - 0.647163
NA Tfu_2043 tyrosyl-tRNA synthetase, class Ibchromosome CDS2392883 1344 - 0.658482
NA Tfu_1441 pyrrolo-quinoline quinonechromosome CDS1668194 2001 + 0.698151
NA Tfu_2650 Ribosomal protein S7, bacterial and organelle formchromosome CDS3112539 471 - 0.645435
NA Tfu_0359 peptide chain release factor 3:Small GTP-binding protein domainchromosome CDS402740 1629 - 0.701044
NA Tfu_0606 glutamyl-tRNA(Gln) amidotransferase A subunitchromosome CDS697648 1497 + 0.695391
NA Tfu_1901 HRDC:3'-5' exonucleasechromosome CDS2225998 1263 + 0.707838
NA Tfu_2034 hemolysin Achromosome CDS2379176 801 - 0.702871
NA Tfu_0903 putative acetyltransferasechromosome CDS1065248 534 - 0.657303
NA Tfu_2418 modification methylase HemKchromosome CDS2838089 858 - 0.692308
NA Tfu_2365 ribonuclease PHchromosome CDS2788401 720 - 0.6375
NA Tfu_2657 Ribosomal protein L1, bacterial and chloroplast formchromosome CDS3126421 708 - 0.675141
NA Tfu_2644 50S ribosomal protein L23chromosome CDS3106984 291 - 0.591065
NA Tfu_0664 16S rRNA processing protein RimMchromosome CDS770029 513 + 0.680312
NA Tfu_0968 peptidase M24A, methionine aminopeptidase, subfamily 1chromosome CDS1135566 852 - 0.64554
NA Tfu_1567 leucine-rich repeat family protein / extensin family proteinchromosome CDS1805679 465 + 0.688172
NA Tfu_2617 Ribosomal protein L17chromosome CDS3092117 519 - 0.687861
NA Tfu_2061 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS2414648 1119 - 0.679178
NA Tfu_3117 Ribosomal protein L34chromosome CDS3641512 144 - 0.6875
NA Tfu_2634 50S ribosomal protein L5chromosome CDS3102214 576 - 0.638889
NA Tfu_0772 prolyl-tRNA synthetase, bacterialchromosome CDS914348 1749 + 0.688965
NA Tfu_0677 elongation factor Tschromosome CDS781174 837 + 0.667861
NA Tfu_2624 peptidase M24A, methionine aminopeptidase, subfamily 1chromosome CDS3096140 825 - 0.667879
NA Tfu_2648 translation elongation factor Tu:Small GTP-binding protein domainchromosome CDS3109132 1194 - 0.634841
NA Tfu_2628 Ribosomal protein L30, bacterialchromosome CDS3099601 186 - 0.639785
NA Tfu_2064 Ribosomal protein L20, bacterial and organelle formchromosome CDS2418225 378 - 0.65873
NA Tfu_0781 tRNA pseudouridine synthase Bchromosome CDS923146 882 + 0.727891
NA Tfu_2646 putative ribosomal protein L3chromosome CDS3107943 651 - 0.640553
NA Tfu_0609 glutamyl-tRNA(Gln) amidotransferase B subunitchromosome CDS702629 1554 + 0.689833
NA Tfu_3102 metal-dependent phosphohydrolasechromosome CDS3624703 1659 - 0.670886
NA Tfu_0673 conserved hypothetical proteinchromosome CDS778091 375 + 0.661333
NA Tfu_0269 arginyl-tRNA synthetase, class Icchromosome CDS298664 1731 - 0.670133
NA Tfu_0114 conserved hypothetical proteinchromosome CDS138260 468 + 0.679487
NA Tfu_0665 tRNA (guanine-N1-)-methyltransferasechromosome CDS770716 789 + 0.679341