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2024-05-03 02:05:11

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Psychrobacter arcticum 273-4, 273-4

Number of genes found: 164

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Psychrobacter arcticum 273-4, 273-4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Psyc_0516 conserved hypothetical proteinchromosome CDS609944 624 - 0.402244
NA Psyc_1178 possible rRNA methyltransferase SpoU family proteinchromosome CDS1413893 897 + 0.45039
NA Psyc_1726 putative Endoribonuclease L-PSPchromosome CDS2127083 381 + 0.409449
NA Psyc_0053 conserved hypothetical proteinchromosome CDS60448 1215 - 0.492181
NA Psyc_0658 conserved hypothetical proteinchromosome CDS781351 513 + 0.317739
NA Psyc_1764 hypothetical proteinchromosome CDS2171938 627 - 0.454545
NA Psyc_1661 hypothetical proteinchromosome CDS2058843 597 - 0.425461
NA Psyc_1159 conserved hypothetical proteinchromosome CDS1385740 810 - 0.412346
NA Psyc_1032 putative bacteriophage lysozymechromosome CDS1221190 618 + 0.462783
NA Psyc_2038 putative tRNA synthetase domain proteinchromosome CDS2506072 1008 + 0.435516
NA Psyc_1536 conserved hypothetical proteinchromosome CDS1878243 1578 - 0.451838
NA Psyc_1197 hypothetical proteinchromosome CDS1437943 399 - 0.388471
NA Psyc_1300 probable TIM-barrel protein, nifR3 familychromosome CDS1565152 1032 - 0.463178
NA Psyc_1113 hypothetical proteinchromosome CDS1326940 294 - 0.346939
NA Psyc_0894 conserved hypothetical proteinchromosome CDS1069235 1092 - 0.467033
NA Psyc_1082 possible ATP-dependent DEAD/DEAH box RNA-helicasechromosome CDS1292149 1704 + 0.477113
NA Psyc_0024 possible pseudouridine synthasechromosome CDS26978 720 + 0.455556
NA Psyc_1924 probable D-tyrosyl-tRNA deacylasechromosome CDS2372433 456 - 0.453947
NA Psyc_0060 probable RNA methyltransferase, TrmH family, group 3chromosome CDS66968 771 + 0.485084
NA Psyc_1644 possible tRNA-(ms(2)io(6)a)-hydroxylasechromosome CDS2034613 786 + 0.450382
NA Psyc_2138 conserved hypothetical proteinchromosome CDS2640011 1575 - 0.449524
NA Psyc_0838 probable class I peptide chain release factor (RF-1)chromosome CDS1006137 414 + 0.434783
NA Psyc_1345 possible endoribonucleasechromosome CDS1622551 339 - 0.474926
NA Psyc_0789 possible dihydrouridine synthase, TIM-barrel protein familychromosome CDS942973 972 - 0.470165
NA Psyc_1234 probable modification methylase, HemK familychromosome CDS1478906 918 - 0.422658
NA Psyc_0540 probable tRNA/rRNA methyltransferasechromosome CDS632966 807 - 0.459727
NA Psyc_0855 putative pseudouridine synthasechromosome CDS1023566 999 + 0.446446
NA Psyc_2147 hypothetical proteinchromosome CDS2650418 135 - 0.488889
NA Psyc_1339 ribosomal protein L9chromosome CDS1618646 501 + 0.423154
NA Psyc_0047 conserved hypothetical proteinchromosome CDS53920 609 - 0.417077
NA Psyc_1517 probable nucleotidyl transferasechromosome CDS1851432 741 - 0.454791
NA Psyc_0646 probable pseudouridine synthasechromosome CDS766279 948 - 0.472574
NA Psyc_1266 conserved hypothetical proteinchromosome CDS1524603 288 + 0.388889
NA Psyc_0999 possible transposasechromosome CDS1191891 579 + 0.423143
NA Psyc_2134 conserved hypothetical proteinchromosome CDS2634846 645 - 0.451163
NA Psyc_0114 conserved hypothetical proteinchromosome CDS135879 2238 + 0.452189
NA Psyc_0659 probable methionyl-tRNA formyltransferasechromosome CDS781860 678 + 0.374631
NA Psyc_0171 putative ribosomal protein L25chromosome CDS197634 675 - 0.417778
NA Psyc_0547 conserved hypothetical proteinchromosome CDS640580 1680 - 0.439286
NA Psyc_0950 probable heat shock RNA-binding proteinchromosome CDS1135339 441 - 0.47619
NA Psyc_1740 conserved hypothetical proteinchromosome CDS2144589 309 + 0.440129
alaS Psyc_1460 alanyl-tRNA synthetase, class IIcchromosome CDS1772104 2673 + 0.470632
ansA Psyc_1407 possible L-asparaginase, type Ichromosome CDS1704113 1086 + 0.461326
argS Psyc_1946 arginyl tRNA synthetasechromosome CDS2398666 1830 - 0.445902
aspS Psyc_1203 aspartyl-tRNA synthetasechromosome CDS1444480 1827 + 0.451013
cca Psyc_1368 probable tRNA nucleotidyltransferasechromosome CDS1651145 1188 + 0.454545
cumB Psyc_1496 probable cytidine/deoxycytidylate deaminasechromosome CDS1816145 588 - 0.426871
cysS Psyc_1361 cysteinyl-tRNA synthetase, class Iachromosome CDS1640108 1467 - 0.456714
def Psyc_0030 putative polypeptide deformylasechromosome CDS34198 555 - 0.427027
dus Psyc_2004 possible tRNA-dihydrouridine synthasechromosome CDS2470575 1053 + 0.468186
efp Psyc_1680 elongation factor P (EF-P)chromosome CDS2079644 573 + 0.445026
fmt Psyc_2139 putative methionyl-tRNA formyltransferasechromosome CDS2641656 1086 - 0.477901
frr Psyc_1534 ribosome recycling/releasing factor (RRF)chromosome CDS1876646 555 - 0.45045
ftsJ Psyc_1739 23S rRNA methylase, heat shock proteinchromosome CDS2143595 633 - 0.443918
fusA1 Psyc_1895 elongation factor G (EF-G)chromosome CDS2339853 2127 - 0.441467
gatA Psyc_0481 glutamyl-tRNA (Gln) amidotransferase, A subunitchromosome CDS587109 1497 - 0.473614
gatB Psyc_0480 glutamyl-tRNA (Gln) amidotransferase, B subunitchromosome CDS585580 1530 - 0.469281
gatC Psyc_0482 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS588671 315 - 0.450794
glnS Psyc_0694 glutaminyl-tRNA synthetasechromosome CDS824421 1740 + 0.448276
gltX Psyc_2057 glutamyl-tRNA synthetasechromosome CDS2530575 1530 + 0.471895
glyQ Psyc_1774 glycyl-tRNA synthetase, alpha subunitchromosome CDS2184650 990 - 0.466667
glyS Psyc_1773 glycyl-tRNA synthetase, beta subunitchromosome CDS2182547 2094 - 0.4532
gshB Psyc_1752 probable glutathione synthetasechromosome CDS2158594 984 - 0.438008
hemK Psyc_1456 putative modification methylase HemK family proteinchromosome CDS1766870 1176 - 0.443027
hisS Psyc_0683 histidyl-tRNA synthetase, class IIachromosome CDS811539 1329 + 0.462002
ileS Psyc_0364 isoleucyl-tRNA synthetase, class Iachromosome CDS451302 2826 - 0.470984
infA Psyc_1409 translation initiation factor IF-1chromosome CDS1706187 234 + 0.358974
infB Psyc_0069 putative initiation factor 2 (IF-2)chromosome CDS77646 2727 + 0.457646
infC Psyc_2099 initiation factor 3 (IF-3)chromosome CDS2594223 504 + 0.430556
ksgA Psyc_0961 probable ribosomal RNA adenine dimethylasechromosome CDS1147667 864 + 0.457176
leuS Psyc_0576 leucyl-tRNA synthetase bacterial/mitochondrial, class Iachromosome CDS680862 2766 - 0.455531
lysS Psyc_1054 lysyl-tRNA synthetasechromosome CDS1250966 1545 + 0.446602
lysS/U Psyc_0273 putative lysyl-tRNA synthetase, class IIchromosome CDS330504 1029 + 0.456754
map Psyc_0396 methionine aminopeptidase, type 1chromosome CDS497967 795 - 0.47044
miaA Psyc_0920 probable tRNA delta(2)-isopentylpyrophosphatechromosome CDS1102782 1260 + 0.45873
miaB Psyc_1766 putative tRNA-i(6)A37 modification enzyme MiaBchromosome CDS2175888 1491 + 0.449363
omlA Psyc_0264 possible outer membrane lipoprotein OmlAchromosome CDS319028 417 - 0.410072
pheS Psyc_1996 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS2463466 1056 - 0.465909
pnp Psyc_0074 putative polyribonucleotide nucleotidyltransferasechromosome CDS83907 2103 + 0.446505
prfA Psyc_1053 peptide chain release factor 1 (RF-1)chromosome CDS1249626 1089 + 0.463728
prfB Psyc_0819 peptide chain release factor 2 (RF-2)chromosome CDS983773 1050 + 0.470476
prfC Psyc_0380 peptide chain release factor 3 (RF-3)chromosome CDS474234 1596 + 0.461779
prmA Psyc_1470 putative ribosomal protein L11 methyltransferasechromosome CDS1786992 927 + 0.453074
proS Psyc_0429 prolyl-tRNA synthetase, class IIachromosome CDS536241 1719 - 0.457824
pth Psyc_0170 peptidyl-tRNA hydrolasechromosome CDS196856 582 - 0.458763
queA Psyc_1404 probableS-adenosylmethionine:tRNA-ribosyltransfe rase-isomerasechromosome CDS1699158 1212 + 0.422442
rbfA Psyc_0070 putative ribosome-binding factor Achromosome CDS80587 405 + 0.439506
rblT Psyc_1997 ribosomal protein L20chromosome CDS2464845 357 - 0.467787
rhlB Psyc_0943 putative ATP-dependent RNA helicasechromosome CDS1128808 1191 + 0.438287
rimM Psyc_2018 probable 16S rRNA processing proteinchromosome CDS2485641 534 - 0.468165
rlu Psyc_0257 putative pseudouridine synthasechromosome CDS312743 1017 + 0.45821
rluA Psyc_1988 probable pseudouridine synthase, 23S rRNA-specificchromosome CDS2454208 714 - 0.478992
rluD Psyc_1257 putative pseudouridylate synthase, 23S rRNA specificchromosome CDS1510078 1203 - 0.454697
rnd Psyc_0795 putative ribonuclease Dchromosome CDS950427 1299 + 0.454965
rne putative ribonuclease EGchromosome CDS593525 1587 + 0.447385
rnpA Psyc_2146 possible ribonuclease P proteinchromosome CDS2649860 372 - 0.379032
rph Psyc_1865 ribonuclease PH 3' exoribonucleasechromosome CDS2291836 717 - 0.472803
rplA Psyc_1890 ribosomal protein L1chromosome CDS2335584 702 - 0.445869
rplB Psyc_0492 ribosomal protein L2chromosome CDS597586 828 + 0.458937
rplC Psyc_0489 ribosomal protein L3chromosome CDS595972 639 + 0.474178
rplD Psyc_0490 ribosomal protein L4chromosome CDS596625 603 + 0.47927
rplE Psyc_0501 ribosomal protein L5chromosome CDS601557 537 + 0.417132
rplF Psyc_0504 ribosomal protein L6chromosome CDS602997 534 + 0.432584
rplJ Psyc_1889 ribosomal protein L10chromosome CDS2334619 528 - 0.445076
rplK Psyc_1891 ribosomal protein L11chromosome CDS2336285 432 - 0.460648
rplL Psyc_1888 ribosomal protein L7/L12chromosome CDS2334121 372 - 0.443548
rplM Psyc_1565 ribosomal protein L13chromosome CDS1917628 429 + 0.428904
rplN Psyc_0499 ribosomal protein L14chromosome CDS600841 369 + 0.436314
rplO Psyc_0508 ribosomal protein L15chromosome CDS604610 441 + 0.460317
rplP Psyc_0496 ribosomal protein L16chromosome CDS599777 414 + 0.417874
rplQ Psyc_0515 ribosomal protein L17chromosome CDS609372 360 + 0.45
rplR Psyc_0505 ribosomal protein L18chromosome CDS603542 351 + 0.481481
rplS Psyc_2016 ribosomal protein L19chromosome CDS2484193 393 - 0.483461
rplU Psyc_1573 ribosomal protein L21chromosome CDS1924311 312 - 0.403846
rplV Psyc_0494 ribosomal protein L22chromosome CDS598712 330 + 0.424242
rplW Psyc_0491 ribosomal protein L23chromosome CDS597224 351 + 0.381766
rplX Psyc_0500 ribosomal protein L24chromosome CDS601218 318 + 0.408805
rpmA Psyc_1572 ribosomal protein L27chromosome CDS1923962 258 - 0.46124
rpmB Psyc_1710 ribosomal protein L28chromosome CDS2112006 237 + 0.434599
rpmC Psyc_0497 ribosomal protein L29chromosome CDS600190 198 + 0.424242
rpmD Psyc_0507 ribosomal protein L30chromosome CDS604431 180 + 0.422222
rpmE Psyc_1916 putative ribosomal protein L31chromosome CDS2364663 387 - 0.421189
rpmF Psyc_0519 ribosomal protein L32chromosome CDS612666 183 + 0.42623
rpmG Psyc_1711 ribosomal protein L33chromosome CDS2112408 156 + 0.333333
rpmI Psyc_1998 ribosomal protein L35chromosome CDS2465337 198 - 0.464646
rpmJ Psyc_0510 ribosomal protein L36chromosome CDS606433 117 + 0.435897
rpsA Psyc_1494 ribosomal protein S1chromosome CDS1813226 1692 - 0.428487
rpsB Psyc_0350 ribosomal protein S2chromosome CDS436838 795 + 0.446541
rpsC Psyc_0495 ribosomal protein S3chromosome CDS599045 729 + 0.462277
rpsD Psyc_0513 ribosomal protein S4chromosome CDS607622 642 + 0.434579
rpsE Psyc_0506 ribosomal protein S5chromosome CDS603895 516 + 0.426357
rpsF Psyc_1337 ribosomal protein S6chromosome CDS1617980 399 + 0.463659
rpsG Psyc_1896 ribosomal protein S7chromosome CDS2342366 474 - 0.468354
rpsH Psyc_0503 ribosomal protein S8chromosome CDS602423 399 + 0.448622
rpsI Psyc_1566 ribosomal protein S9chromosome CDS1918067 387 + 0.457364
rpsJ Psyc_0488 ribosomal protein S10chromosome CDS595612 312 + 0.467949
rpsK Psyc_0512 ribosomal protein S11chromosome CDS607184 390 + 0.484615
rpsL Psyc_1897 ribosomal protein S12chromosome CDS2343048 375 - 0.453333
rpsM Psyc_0511 ribosomal protein S13chromosome CDS606807 357 + 0.45098
rpsN Psyc_0502 ribosomal protein S14chromosome CDS602106 306 + 0.470588
rpsO Psyc_0073 ribosomal protein S15chromosome CDS83015 267 + 0.441948
rpsP Psyc_2019 ribosomal protein S16chromosome CDS2486372 270 - 0.459259
rpsQ Psyc_0498 ribosomal protein S17chromosome CDS600384 276 + 0.423913
rpsR Psyc_1338 ribosomal protein S18chromosome CDS1618395 231 + 0.415584
rpsS Psyc_0493 probable ribosomal protein S19chromosome CDS598426 276 + 0.431159
rpsT Psyc_1487 ribosomal protein S20chromosome CDS1807754 267 + 0.456929
rpsU Psyc_0211 ribosomal protein S21chromosome CDS251039 216 - 0.402778
rsu Psyc_0286 probable RNA pseudouridine synthasechromosome CDS349170 627 - 0.454545
serS Psyc_1618 seryl-tRNA synthetase, class IIachromosome CDS2000255 1284 - 0.45405
spoU Psyc_1222 probable tRNA/rRNA methyltransferasechromosome CDS1464855 561 - 0.470588
tgt Psyc_1524 queuine tRNA-ribosyltransferasechromosome CDS1863438 1152 + 0.450521
thrS Psyc_2098 threonyl-tRNA synthetasechromosome CDS2592265 1935 + 0.430491
trmD Psyc_2017 putative tRNA (guanine-N1)-methyltransferasechromosome CDS2484774 765 - 0.477124
trmU Psyc_1244 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1492614 1227 + 0.460473
trpS Psyc_1568 tryptophanyl-tRNA synthetase, class Ibchromosome CDS1919952 1089 + 0.440771
truA Psyc_1408 probable tRNA pseudouridine synthasechromosome CDS1705244 831 + 0.465704
truB Psyc_0071 probable tRNA pseudouridine synthase Bchromosome CDS81008 1143 + 0.405074
tsf Psyc_0351 elongation factor Ts (EF-Ts)chromosome CDS437862 885 + 0.428249
tufBa Psyc_0383 elongation factor Tu (EF-Tu)chromosome CDS479294 1191 + 0.47691
tufBb Psyc_1894 elongation factor Tu (EF-Tu)chromosome CDS2338442 1191 - 0.47691
tyrS Psyc_1970 tyrosyl-tRNA synthetasechromosome CDS2429332 1212 - 0.437294
valS Psyc_1850 valyl-tRNA synthetasechromosome CDS2275303 2955 - 0.473435
yfiA Psyc_0204 putative sigma 54 (rpoN) modulation protein/ribosomal protein S30EAchromosome CDS244975 381 + 0.425197
ygcA Psyc_0344 probable RNA methyltransferase, TrmA familychromosome CDS426591 1539 - 0.463288