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2024-05-18 16:43:13

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Pseudomonas fluorescens Pf-5, Pf-5

Number of genes found: 221

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Pseudomonas fluorescens Pf-5, Pf-5
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA PFL_4251 ATP-dependent RNA helicase, DEAD box familyRecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; chromosome CDS4947304 1674 - 0.62724
NA PFL_1606 peptidyl-tRNA hydrolase domain protein chromosome CDS1802227 462 + 0.636364
NA PFL_2299 tRNA synthetase class II family proteinSubName: Full=tRNA synthetase class II family protein; chromosome CDS2562092 450 + 0.688889
NA PFL_5373 tRNA (uracil-5-)-methyltransferaseRecName: Full=tRNA/tmRNA (uracil-C(5))-methyltransferase; EC=2.1.1.-; EC=2.1.1.35; AltName: Full=tRNA (uracil(54)-C(5))-methyltransferase; AltName: Full=tRNA(m5U54)-methyltransferase; Short=RUMT; AltName: Full=tmRNA (uracil(341)-C(5))-methyltransferase; chromosome CDS6140901 1080 + 0.641667
NA PFL_5178 amidase family proteinSubName: Full=Amidase family protein; chromosome CDS5939074 1464 + 0.664617
NA PFL_0375 RNA methyltransferase, TrmH family, group 2RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; chromosome CDS426682 456 - 0.644737
NA PFL_2434 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS2698940 528 - 0.655303
NA PFL_1361 amidase family proteinSubName: Full=Amidase family protein; chromosome CDS1538955 1359 + 0.703458
NA PFL_5745 cytidine/deoxycytidylate deaminase family proteinSubName: Full=Cytidine/deoxycytidylate deaminase family protein; chromosome CDS6547242 510 - 0.682353
NA PFL_0281 heat shock protein 15 chromosome CDS327513 462 + 0.623377
NA PFL_2128 acetyltransferase, putativeSubName: Full=Putative acetyltransferase; chromosome CDS2351908 552 - 0.594203
NA PFL_5407 ATP-dependent RNA helicase, DEAD box familySubName: Full=Putative ATP-dependent RNA helicase; EC=3.6.1.-; chromosome CDS6176104 1335 - 0.650187
NA PFL_5214 Putative translation initiation inhibitor chromosome CDS5971176 684 + 0.611111
NA PFL_4315 initiation factor 2 subunit familyRecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; chromosome CDS5018206 1077 - 0.630455
NA PFL_4688 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5415949 255 + 0.52549
NA PFL_3583 endoribonuclease L-PSP family proteinSubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS4133822 390 - 0.628205
NA PFL_2655 amidase family proteinSubName: Full=Amidase family protein; chromosome CDS2934523 1464 - 0.700137
NA PFL_6151 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS6985227 672 + 0.638393
NA PFL_3320 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS3833845 540 + 0.696296
NA PFL_5271 tRNA synthetase domain proteinRecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs; EC=6.1.1.-; chromosome CDS6035224 897 + 0.657748
NA PFL_0844 translation initiation factor IF-2RecName: Full=Translation initiation factor IF-2; chromosome CDS973367 2517 + 0.609456
NA PFL_1346 amidase family proteinSubName: Full=Amidase family protein; chromosome CDS1522407 1464 + 0.67418
NA PFL_5644 nucleotidyltransferase family proteinSubName: Full=Nucleotidyl transferase family protein; chromosome CDS6428466 675 - 0.644444
NA PFL_3526 Endoribonuclease L-PSP superfamilySubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS4065034 411 - 0.654501
NA PFL_1598 Sua5/YciO/YrdC/YwlC family protein chromosome CDS1794199 654 + 0.64526
NA PFL_1549 ATP-dependent RNA helicase SrmB chromosome CDS1737861 1422 + 0.622363
NA PFL_3101 ribosomal protein S6 modification protein-related proteinSubName: Full=RimK-like ATP-grasp domain protein; chromosome CDS3571100 1587 - 0.593573
NA PFL_5402 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS6171398 570 - 0.635088
NA PFL_1975 TIM-barrel protein, yjbN familyRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS2205949 1011 - 0.612265
NA PFL_1095 16S rRNA processing protein RimMRecName: Full=Ribosome maturation factor RimM; chromosome CDS1250073 537 + 0.560521
NA PFL_5801 ATP-dependent RNA helicase, DEAD box familyRecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; chromosome CDS6608600 1869 + 0.669877
NA PFL_0807 acetyltransferase, GNAT familySubName: Full=Acetyltransferase, GNAT family; chromosome CDS933430 549 - 0.520947
NA PFL_0678 translation initiation factor SUI1 chromosome CDS790535 441 + 0.637188
NA PFL_0578 RNA methyltransferase, TrmH family, group 3RecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS673976 765 + 0.657516
NA PFL_3536 amidase family proteinSubName: Full=Amidase family protein; chromosome CDS4077152 1440 + 0.671528
NA PFL_1247 MiaB-like tRNA modifying enzyme YliG, TIGR01125RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS1416287 1338 - 0.621824
NA PFL_5361 nucleotide methyltransferase, putativeRecName: Full=Ribosomal RNA large subunit methyltransferase G; EC=2.1.1.174; AltName: Full=23S rRNA m2G1835 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RlmG; chromosome CDS6131220 1125 + 0.686222
NA PFL_0783 pesticin domain proteinSubName: Full=Pesticin domain protein; chromosome CDS909901 558 + 0.621864
NA PFL_2671 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2950925 294 + 0.62585
NA PFL_3008 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3459381 1146 + 0.658813
NA PFL_4351 modification methylase, HemK familyRecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; chromosome CDS5058756 909 - 0.630363
NA PFL_5772 ATP-independent RNA helicase DbpASubName: Full=ATP-independent RNA helicase DbpA; EC=3.6.1.-; chromosome CDS6576787 1386 + 0.634921
NA PFL_3680 amidase family proteinSubName: Full=Amidase family protein; chromosome CDS4256541 1413 + 0.689314
NA PFL_5748 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS6550340 255 + 0.564706
NA PFL_6064 endoribonuclease L-PSP, putativeSubName: Full=Putative endoribonuclease L-PSP; chromosome CDS6885451 381 + 0.580052
NA PFL_1418 acetyltransferase, GNAT family, putative chromosome CDS1599867 576 + 0.637153
NA PFL_0834 conserved hypothetical proteinSubName: Full=RNA-binding protein, YhbY family; chromosome CDS964361 309 - 0.521036
NA PFL_2037 acetyltransferase, GNAT family chromosome CDS2264204 648 - 0.645062
NA PFL_6037 endoribonuclease L-PSP family proteinSubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS6859598 354 - 0.610169
NA PFL_1235 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1407171 426 - 0.584507
NA PFL_4928 cytidine/deoxycytidylate deaminase family proteinRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS5678227 489 - 0.672802
NA PFL_2910 conserved hypothetical protein chromosome CDS3254192 588 - 0.671769
NA PFL_2961 endoribonuclease L-PSP family protein chromosome CDS3318088 444 - 0.632883
NA PFL_3941 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS4554933 405 + 0.558025
NA PFL_4223 RNA pseudouridine synthase family proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS4912493 891 - 0.624018
NA PFL_3322 ribonuclease T2 family protein, putativeSubName: Full=Ribonuclease T2 family protein; chromosome CDS3835691 657 - 0.640791
NA PFL_0025 Sua5/YciO/YrdC/YwlC family proteinRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS26911 558 + 0.641577
NA PFL_0796 endoribonuclease L-PSP family proteinSubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS921019 384 - 0.645833
NA PFL_3896 type II and III secretion system family protein chromosome CDS4495966 858 + 0.621212
NA PFL_1310 translation initiation inhibitorSubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS1483833 471 - 0.66242
NA PFL_1502 RNA methyltransferase, putativeSubName: Full=RNA methyltransferase, TrmH family; chromosome CDS1687160 468 - 0.621795
NA PFL_2384 acetyltransferase, GNAT family, putativeSubName: Full=Acetyltransferase, GNAT family; chromosome CDS2653780 576 + 0.666667
NA PFL_0981 ribosomal subunit interface protein, putative chromosome CDS1122548 360 + 0.625
NA PFL_5007 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5767714 519 + 0.628131
NA PFL_4787 transcriptional regulator, putativeSubName: Full=Transcriptional regulator MvaT; chromosome CDS5527351 375 + 0.552
NA PFL_1385 endoribonuclease L-PSP family proteinSubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS1564719 498 + 0.678715
NA PFL_4689 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS5416895 1440 + 0.573611
NA PFL_0222 guanine deaminase, putativeSubName: Full=Putative guanine deaminase; EC=3.5.4.3; chromosome CDS259823 462 - 0.670996
NA PFL_0278 ribosomal protein S6 modification protein PA5197RecName: Full=Probable alpha-L-glutamate ligase; EC=6.3.2.-; chromosome CDS325274 906 - 0.636865
NA PFL_1857 conserved hypothetical proteinSubName: Full=Alpha-L-glutamate ligase-related protein; chromosome CDS2062076 987 - 0.628166
NA PFL_4727 modification methylase, HemK familySubName: Full=Methyltransferase, HemK family; chromosome CDS5464698 981 - 0.658512
NA PFL_1693 YER057c/YjgF/UK114 family protein, putativeSubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS1894111 450 + 0.666667
NA PFL_4968 RNA methyltransferase, TrmH family, group 1SubName: Full=tRNA (Cytidine/uridine-2-O-)-methyltransferase TrmJ; EC=2.1.1.-; chromosome CDS5720224 774 - 0.618863
NA PFL_0804 endoribonuclease, putativeSubName: Full=Putative endoribonuclease L-PSP; chromosome CDS930194 378 - 0.645503
NA PFL_1393 hypothetical protein chromosome CDS1574129 747 + 0.631861
NA PFL_5166 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS5925525 600 + 0.563333
NA PFL_1046 ATP-dependent RNA helicase RhlB chromosome CDS1196723 1491 - 0.65057
NA PFL_3802 flagellar protein G (flaG) chromosome CDS4401778 471 + 0.579618
NA PFL_5211 acetyltransferase, GNAT family, putativeSubName: Full=Acetyltransferase, GNAT family; chromosome CDS5967675 528 + 0.655303
NA PFL_5122 ribosomal RNA small subunit methyltransferase CRecName: Full=Ribosomal RNA small subunit methyltransferase C; EC=2.1.1.172; AltName: Full=16S rRNA m2G1207 methyltransferase; AltName: Full=rRNA (guanine-N(2)-)-methyltransferase RsmC; chromosome CDS5887211 999 + 0.666667
NA PFL_5807 endoribonuclease L-PSP family proteinSubName: Full=Endoribonuclease L-PSP family protein; chromosome CDS6615541 351 - 0.663818
NA PFL_3681 amidase family proteinSubName: Full=Amidase family protein; chromosome CDS4258443 1395 + 0.673118
alaS PFL_4506 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS5215619 2625 - 0.613333
ansA PFL_6140 L-asparaginase ISubName: Full=Asparaginase; chromosome CDS6971967 1002 + 0.700599
ansB PFL_2099 glutaminase-asparaginaseSubName: Full=Glutamin-(Asparagin-)ase; EC=3.5.1.38; chromosome CDS2319331 1089 - 0.601469
argS PFL_0439 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS501953 1737 - 0.64076
arnA PFL_3045 UDP-D-glucuronate dehydrogenaseRecName: Full=Bifunctional polymyxin resistance protein ArnA; Includes: RecName: Full=UDP-4-amino-4-deoxy-L-arabinose formyltransferase; EC=2.1.2.13; AltName: Full=ArnAFT; AltName: Full=UDP-L-Ara4N formyltransferase; Includes: RecName: Full=UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; EC=1.1.1.305; AltName: Full=ArnADH; AltName: Full=UDP-GlcUA decarboxylase; AltName: Full=UDP-glucuronic acid dehydrogenase; chromosome CDS3511106 2007 + 0.635775
aspS PFL_4767 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; chromosome CDS5503948 1776 - 0.621622
cafA PFL_0900 ribonuclease GSubName: Full=Ribonuclease G; EC=3.1.26.-; chromosome CDS1043038 1458 + 0.616598
cca PFL_5656 tRNA nucleotidyltransferaseRecName: Full=Multifunctional CCA protein; Includes: RecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl-transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; Includes: RecName: Full=2-nucleotidase; EC=3.1.3.-; Includes: RecName: Full=2,3-cyclic phosphodiesterase; EC=3.1.4.-; Includes: RecName: Full=Phosphatase; EC=3.1.3.-; chromosome CDS6443200 1230 + 0.637398
cysS PFL_3912 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS4515180 1383 - 0.619667
def PFL_0022 polypeptide deformylase chromosome CDS23992 642 - 0.593458
def PFL_4594 polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS5303261 540 - 0.625926
dtd PFL_0412 D-tyrosyl-tRNA(Tyr) deacylaseRecName: Full=D-tyrosyl-tRNA(Tyr) deacylase; EC=3.1.-.-; chromosome CDS475144 438 + 0.623288
dusB PFL_0668 tRNA-dihydrouridine synthase BRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS778620 1014 - 0.619329
efp PFL_4264 translation elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS4962129 573 - 0.546248
fmt PFL_0021 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS22963 960 - 0.673958
frr PFL_1179 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS1350661 558 + 0.569892
fusA PFL_5585 translation elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS6363935 2148 - 0.5554
gatA PFL_2778 amidase family protein chromosome CDS3082770 1833 - 0.698854
gatA PFL_0894 glutamyl-tRNA(Gln) amidotransferase, A subunitRecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome CDS1037597 1452 - 0.654959
gatB PFL_0893 glutamyl-tRNA(Gln) amidotransferase, B subunitRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS1036141 1446 - 0.625173
gatC PFL_0895 glutamyl-tRNA(Gln) amidotransferase, C subunitRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; chromosome CDS1039065 288 - 0.583333
glnS PFL_3913 glutaminyl-tRNA synthetaseRecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; chromosome CDS4516581 1701 - 0.617872
gltX PFL_2049 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS2277637 1482 + 0.622807
glyQ PFL_0014 glycyl-tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; chromosome CDS16791 954 - 0.614256
glyS PFL_0013 glycyl-tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; chromosome CDS14740 2055 - 0.655961
gshB PFL_5828 glutathione synthetaseRecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; AltName: Full=Glutathione synthase; chromosome CDS6638362 954 + 0.654088
hemK PFL_5158 hemK proteinRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS5917552 831 - 0.693141
hisS PFL_4953 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS5707689 1290 - 0.621705
hoxX PFL_3670 hydrogenase matureation protein HoxXSubName: Full=Formyl transferase domain/enoyl-CoA hydratase/isomerase family protein; EC=2.1.2.-; chromosome CDS4244500 1719 + 0.667248
ileS PFL_5321 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS6085854 2832 - 0.63065
infA PFL_3884 translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS4482759 219 + 0.525114
infC PFL_2112 translation initiation factor IF-3 chromosome CDS2332830 552 + 0.521739
kptA PFL_5848 RNA 2'-phosphotransferaseRecName: Full=Probable RNA 2-phosphotransferase; EC=2.7.1.-; chromosome CDS6654116 549 + 0.621129
ksgA PFL_5649 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS6435410 813 + 0.655597
leuS PFL_5439 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS6208893 2607 + 0.615267
lysS PFL_1138 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS1305417 1503 + 0.597472
map PFL_1175 methionine aminopeptidase, type I chromosome CDS1346714 891 - 0.608305
map PFL_3100 methionine aminopeptidase, type IRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS3570329 765 + 0.656209
miaA PFL_0565 tRNA delta(2)-isopentenylpyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS658261 972 + 0.611111
miaB PFL_5432 tRNA-i(6)A37 thiotransferase enzyme MiaBRecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; chromosome CDS6201870 1329 + 0.61851
miaE PFL_2636 tRNA-(ms[2]io[6]A)-hydroxylase chromosome CDS2916762 624 + 0.637821
nifR3 PFL_2059 NifR3/Smm1 family protein chromosome CDS2282274 1089 + 0.653811
omlA PFL_0823 outer membrane lipoprotein OmlARecName: Full=Outer membrane protein assembly factor BamE; Flags: Precursor; chromosome CDS950798 528 - 0.573864
pcnB PFL_5275 poly(A) polymerase chromosome CDS6041232 1668 + 0.602518
pheS PFL_2115 phenylalanyl-tRNA synthetase, alpha subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS2334134 1017 + 0.584071
pnp PFL_0848 polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS977948 2112 + 0.602746
prfA PFL_5159 peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS5918383 1083 - 0.631579
prfB PFL_2086 peptide chain release factor 2 chromosome CDS2310662 621 - 0.637681
prfB PFL_1137 peptide chain release factor 2 (RF-2), programmed frameshift chromosome CDS1304209 1096 + 0.608577
prfC PFL_0872 peptide chain release factor 3RecName: Full=Peptide chain release factor 3; Short=RF-3; chromosome CDS1011745 1584 + 0.628157
prmA PFL_0670 ribosomal protein L11 methyltransferaseRecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; chromosome CDS781164 879 - 0.665529
proS PFL_1256 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS1427247 1716 - 0.61655
pth PFL_5167 peptidyl-tRNA hydrolase chromosome CDS5926251 627 + 0.598086
queA PFL_4975 S-adenosylmethionine:tRNAribosyltransferase-isom eraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome CDS5727234 1065 - 0.635681
rbfA PFL_0845 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS976043 402 + 0.604478
rfbF PFL_5094 glucose-1-phosphate cytidylyltransferaseSubName: Full=Glucose-1-phosphate cytidylyltransferase; EC=2.7.7.33; chromosome CDS5855180 774 + 0.488372
rluA PFL_4382 ribosomal large subunit pseudouridine synthase ARecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS5090348 636 + 0.632075
rluB PFL_1602 ribosomal large subunit pseudouridine synthase BRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1797130 1191 + 0.665827
rluC PFL_1788 ribosomal large subunit pseudouridine synthase CRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1992571 957 + 0.621735
rluD PFL_5306 ribosomal large subunit pseudouridine synthase D chromosome CDS6072225 1062 - 0.631827
rluE PFL_5423 ribosomal large subunit pseudouridine synthase ERecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS6191149 639 - 0.660407
rnd PFL_1495 ribonuclease DRecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; chromosome CDS1681473 1134 + 0.659612
rne PFL_1787 ribonuclease, Rne/Rng family protein chromosome CDS1988641 3264 - 0.638174
rph PFL_6059 ribonuclease PHRecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; chromosome CDS6880342 723 - 0.625173
rplA PFL_5592 ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS6376972 696 - 0.571839
rplB PFL_5579 ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS6359789 825 - 0.578182
rplC PFL_5582 ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS6361539 636 - 0.551887
rplD PFL_5581 ribosomal protein L4/L1 familyRecName: Full=50S ribosomal protein L4; chromosome CDS6360924 603 - 0.545605
rplE PFL_5570 ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS6356287 540 - 0.531482
rplF PFL_5567 ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS6354821 534 - 0.561798
rplI PFL_0582 ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS676633 447 + 0.581656
rplJ PFL_5591 ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS6376273 501 - 0.558882
rplK PFL_5593 ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS6377667 432 - 0.543981
rplL PFL_5590 ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS6375827 366 - 0.516393
rplM PFL_5082 ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome CDS5843337 429 - 0.550117
rplN PFL_5572 ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS6357173 369 - 0.536585
rplO PFL_5563 ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS6353339 435 - 0.570115
rplP PFL_5575 ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS6358025 414 - 0.548309
rplQ PFL_5557 ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS6348870 387 - 0.581395
rplR PFL_5566 ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS6354460 351 - 0.589744
rplS PFL_1097 ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS1251410 351 + 0.549858
rplT PFL_2114 ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS2333667 357 + 0.526611
rplU PFL_5329 ribosomal protein L21 chromosome CDS6095456 312 - 0.528846
rplV PFL_5577 ribosomal protein L22 chromosome CDS6359151 336 - 0.568452
rplW PFL_5580 ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS6360628 300 - 0.523333
rplX PFL_5571 ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS6356847 315 - 0.526984
rpmA PFL_5328 ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS6095163 258 - 0.550388
rpmB PFL_6049 ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS6870815 237 - 0.535865
rpmC PFL_5574 ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS6357834 192 - 0.53125
rpmD PFL_5564 ribosomal protein L30RecName: Full=50S ribosomal protein L30; chromosome CDS6353777 177 - 0.508475
rpmE PFL_4896 ribosomal protein L31RecName: Full=50S ribosomal protein L31 type B; chromosome CDS5639508 270 - 0.618519
rpmE PFL_0441 ribosomal protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS506419 222 + 0.567568
rpmF PFL_1793 ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS1996469 183 + 0.551913
rpmG PFL_6048 ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS6870648 156 - 0.448718
rpmH PFL_6231 ribosomal protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS7074293 135 - 0.577778
rpmI PFL_2113 ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS2333442 195 + 0.507692
rpmJ PFL_3806 ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS4404770 150 - 0.573333
rpsA PFL_4308 ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS5007077 1695 - 0.538643
rpsB PFL_1176 ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS1347904 738 + 0.563686
rpsC PFL_5576 ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS6358451 687 - 0.54294
rpsD PFL_5559 ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS6350323 621 - 0.544283
rpsE PFL_5565 ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS6353956 501 - 0.55489
rpsF PFL_0579 ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS674991 426 + 0.551643
rpsG PFL_5586 ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS6366113 471 - 0.558386
rpsH PFL_5568 ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS6355367 393 - 0.541985
rpsI PFL_5081 ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS5842930 393 - 0.559796
rpsJ PFL_5583 ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS6362255 312 - 0.528846
rpsK PFL_5560 ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS6350962 390 - 0.574359
rpsL PFL_5587 ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS6366695 372 - 0.564516
rpsM PFL_5561 ribosomal protein S13p/S18eRecName: Full=30S ribosomal protein S13; chromosome CDS6351382 357 - 0.540616
rpsN PFL_5569 ribosomal protein S14p/S29eRecName: Full=30S ribosomal protein S14; chromosome CDS6355968 306 - 0.578431
rpsO PFL_0847 ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS977481 270 + 0.540741
rpsP PFL_1094 ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS1249816 252 + 0.571429
rpsQ PFL_5573 ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS6357565 267 - 0.524345
rpsR PFL_0580 ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS675445 231 + 0.562771
rpsS PFL_5578 ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS6359497 276 - 0.518116
rpsT PFL_5324 ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS6091563 279 + 0.519713
rpsU PFL_5661 ribosomal protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS6447251 216 + 0.541667
rrmJ PFL_0835 ribosomal RNA large subunit methyltransferase JRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS964774 630 + 0.553968
rsuA PFL_1430 ribosomal small subunit pseudouridine synthase ARecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS1609814 693 - 0.640693
rsuA PFL_1245 S4 domain proteinSubName: Full=S4 domain protein; chromosome CDS1414903 711 - 0.639944
rumA PFL_4447 23S rRNA (uracil-5-)-methyltransferase RumARecName: Full=23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; EC=2.1.1.190; AltName: Full=23S rRNA(m5U1939)-methyltransferase; chromosome CDS5156067 1353 - 0.628234
serS PFL_3876 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS4473766 1281 - 0.637783
sun PFL_0020 sun proteinSubName: Full=Ribosomal RNA small subunit methyltransferase B; EC=2.1.1.-; chromosome CDS21641 1326 - 0.680995
tgt PFL_4974 queuine tRNA-ribosyltransferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS5726104 1134 - 0.597884
thrS PFL_2111 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; chromosome CDS2330908 1923 + 0.579823
thrS PFL_6184 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; chromosome CDS7020422 1890 + 0.651323
trmD PFL_1096 tRNA (guanine-N1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS1250612 753 + 0.573705
trmU PFL_3891 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS4490981 1134 + 0.626984
trpS PFL_5087 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS5848639 1356 - 0.629056
truA PFL_2071 tRNA pseudouridine synthase ARecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS2298574 825 + 0.626667
truB PFL_0846 tRNA pseudouridine synthase BRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS976448 918 + 0.61329
tsf PFL_1177 translation elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS1348845 867 + 0.557093
tuf PFL_5597 translation elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS6379304 1194 - 0.545226
tuf PFL_5584 translation elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS6362707 1194 - 0.544389
tyrS PFL_5607 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS6388506 1200 - 0.55
valS PFL_1063 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS1212001 2847 - 0.637162
ychF PFL_5168 GTP-binding protein YchFRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS5926901 1101 + 0.611263
yfiA PFL_0914 ribosomal subunit interface proteinSubName: Full=Putative sigma(54) modulation protein; chromosome CDS1058445 306 - 0.53268