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2024-04-29 09:17:07

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Rickettsia felis URRWXCal2, URRWXCal2; California 2

Number of genes found: 145

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Rickettsia felis URRWXCal2, URRWXCal2; California 2
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA RF_1345 Putative translation factor proteinchromosome CDS1430576 1086 - 0.356354
NA RF_1286 Cytotoxic translational repressor of toxin-antitoxin system RelEchromosome CDS1366000 249 + 0.232932
NA RF_1341 Ribosomal large subunit pseudouridine synthases, RluD subfamilychromosome CDS1427223 1158 + 0.357513
NA RF_0275 tRNA/rRNA methyltransferasechromosome CDS302936 723 - 0.295989
NA RF_0016 Probable toxin of toxin-antitoxin systemchromosome CDS15554 279 + 0.225806
NA RF_1047 unknownchromosome CDS1107063 318 - 0.408805
NA RF_1172 tRNA/rRNA methyltransferasechromosome CDS1243907 696 - 0.352012
NA RF_0622 unknownchromosome CDS664144 726 + 0.312672
NA RF_0795 rRNA methylasechromosome CDS847412 141 - 0.35461
NA RF_0596 unknownchromosome CDS640761 744 + 0.25672
NA RF_0646 MiaB-like tRNA modifying enzymechromosome CDS691878 1266 + 0.370458
NA RF_0264 ATP-dependent RNA helicase RhlEchromosome CDS292303 1062 + 0.336158
NA RF_1272 Cytotoxic translational repressor of toxin-antitoxin system RelEchromosome CDS1352283 279 - 0.301075
NA RF_0602 Cytotoxic translational repressor of toxin-antitoxin system RelEchromosome CDS646166 129 + 0.232558
NA RF_1237 unknownchromosome CDS1301597 474 + 0.312236
NA RF_0396 unknownchromosome CDS419230 234 + 0.25641
NA RF_0169 unknownchromosome CDS187908 282 + 0.315603
NA RF_0263 ATP-dependent RNA helicase RhlEchromosome CDS292119 237 + 0.337553
NA RF_0898 Cytotoxic translational repressor of toxin-antitoxin system RelEchromosome CDS962129 249 - 0.293173
NA RF_0956 Cytotoxic translational repressor of toxin-antitoxin system RelEchromosome CDS1015113 273 - 0.289377
NA RF_1368 Cytotoxic translational repressor of toxin-antitoxin system RelEchromosome CDS1458322 123 - 0.325203
NA RF_0775 Acetyltransferasechromosome CDS832291 543 + 0.311234
NA RF_0796 rRNA methylaseschromosome CDS847560 402 - 0.345771
NA RF_1319 Cytosine deaminasechromosome CDS1404844 480 - 0.31875
NA RF_0053 Putative surface antigenchromosome CDS54547 1320 - 0.359091
alaS RF_1353 Alanyl-tRNA synthetasechromosome CDS1440429 2637 + 0.353811
argS RF_0109 Arginyl-tRNA synthetasechromosome CDS122140 1731 - 0.340843
aspS RF_1138 Aspartyl-tRNA synthetasechromosome CDS1206421 1803 - 0.374376
cysS RF_0068 Cysteinyl-tRNA synthetasechromosome CDS73318 1380 + 0.336232
def1 RF_0324 Polypeptide deformylasechromosome CDS339942 528 + 0.363636
def2 RF_0730 Polypeptide deformylasechromosome CDS792146 552 + 0.327899
def3 RF_0124 Polypeptide deformylasechromosome CDS142802 675 + 0.305185
efp RF_1049 Translation elongation factor EF-Pchromosome CDS1108556 567 - 0.312169
fmt RF_0325 Methionyl-tRNA formyltransferasechromosome CDS340466 912 + 0.338816
fusA RF_1153 Elongation factor EF-Gchromosome CDS1227493 2202 - 0.36376
gatA RF_1129 Glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS1196505 1482 + 0.383941
gatB RF_1130 Glutamyl-tRNA(Gln) amidotransferase subunit Bchromosome CDS1197989 1452 + 0.355372
gatC RF_1128 Glutamyl-tRNA(Gln) amidotransferase subunit Cchromosome CDS1196200 303 + 0.283828
gltX1 RF_0529 Glutamyl-tRNA synthetasechromosome CDS562734 1344 - 0.337054
gltX2 RF_0413 Glutamyl-tRNA synthetasechromosome CDS433624 1392 - 0.357759
glyQ RF_1347 Glycyl-tRNA synthetase alpha chainchromosome CDS1433677 870 - 0.395402
glyS RF_1346 Glycyl-tRNA synthetase beta chainchromosome CDS1431690 1995 - 0.322807
hemK RF_1344 Methylase of polypeptide chain release factors, tRNA (guanine-N(7)-)-methyltransferasechromosome CDS1429027 1584 + 0.325758
hisS RF_0498 Histidyl-tRNA synthetasechromosome CDS531673 1248 + 0.347756
ileS RF_0423 Isoleucyl-tRNA synthetasechromosome CDS447974 3285 - 0.3793
infA RF_1292 Translation initiation factor IF-1chromosome CDS1377524 216 + 0.356481
infB RF_0871 Translation initiation factor IF-2chromosome CDS926218 2490 - 0.362249
infC RF_0760 Translation initiation factor IF-3chromosome CDS815155 444 + 0.353604
ksgA RF_0256 Dimethyladenosine transferasechromosome CDS285842 732 + 0.337432
leuS RF_0651 Leucyl-tRNA synthetasechromosome CDS698909 2508 + 0.363238
lysS RF_0582 Lysyl-tRNA synthetasechromosome CDS619107 1578 + 0.375792
map RF_1309 Methionine aminopeptidase, type Ichromosome CDS1397362 780 + 0.366667
metG RF_0235 Methionyl-tRNA synthetasechromosome CDS261691 1539 + 0.364522
miaA RF_0714 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS773138 930 - 0.310753
miaB RF_1278 tRNA-i(6)A37 thiotransferase enzyme MiaBchromosome CDS1358842 1338 - 0.369955
nifR3 RF_0012 Putative TIM-barrel protein, nifR3 familychromosome CDS13117 978 + 0.429448
pcnB RF_0019 Poly(A) polymerasechromosome CDS17353 1158 - 0.304836
pheS RF_0647 Phenylalanyl-tRNA synthetase alpha chainchromosome CDS693322 1101 + 0.332425
pnp RF_0721 Polyribonucleotide nucleotidyltransferasechromosome CDS779244 2244 - 0.351604
prfA RF_0762 Peptide chain release factor RF-1chromosome CDS817195 1068 + 0.38015
prfB RF_1001 Peptide chain release factor RF-2chromosome CDS1063533 1108 + 0.394404
proS RF_0600 Prolyl-tRNA synthetasechromosome CDS644449 1284 + 0.351246
pth RF_0353 Peptidyl-tRNA hydrolasechromosome CDS371329 558 + 0.308244
queA RF_0330 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS349105 1104 - 0.353261
rbfA RF_0669 Ribosome-binding factor Achromosome CDS718096 363 - 0.267218
rimJ RF_0218 Ribosomal-protein-alanine acetyltransferasechromosome CDS241029 552 + 0.297101
rimM RF_0555 16S rRNA processing protein RimMchromosome CDS594617 498 - 0.267068
rluA1 RF_1023 Ribosomal large subunit pseudouridine synthasechromosome CDS1083988 918 - 0.28976
rluA2 RF_0863 Ribosomal large subunit pseudouridine synthasechromosome CDS916186 690 + 0.318841
rnd RF_0809 Ribonuclease Dchromosome CDS857758 846 - 0.274232
rnd2 RF_0653 Ribonuclease Dchromosome CDS702277 612 - 0.310458
rne RF_1025 Ribonuclease Echromosome CDS1086391 2037 - 0.317624
rnpA RF_0347 Ribonuclease Pchromosome CDS367899 357 - 0.257703
rph RF_0403 Ribonuclease PHchromosome CDS423624 720 + 0.405556
rplA RF_1149 50S ribosomal protein L1chromosome CDS1224896 720 - 0.330556
rplB RF_0281 50S ribosomal protein L2chromosome CDS307699 822 + 0.346715
rplC RF_0278 50S ribosomal protein L3chromosome CDS305862 648 + 0.324074
rplD RF_0279 50S ribosomal protein L4chromosome CDS306782 624 + 0.326923
rplE RF_0290 50S ribosomal protein L5chromosome CDS311487 540 + 0.296296
rplF RF_0293 50S ribosomal protein L6chromosome CDS312777 534 + 0.312734
rplI RF_0141 50S ribosomal protein L9chromosome CDS158904 516 - 0.30814
rplJ RF_1148 50S ribosomal protein L10chromosome CDS1224276 510 - 0.341176
rplK RF_1150 50S ribosomal protein L11chromosome CDS1225621 438 - 0.333333
rplL RF_1147 50S ribosomal protein L7/L12chromosome CDS1223704 378 - 0.380952
rplM RF_0994 50S ribosomal protein L13chromosome CDS1056764 468 + 0.354701
rplN RF_0288 50S ribosomal protein L14chromosome CDS310789 369 + 0.376694
rplO RF_0297 50S ribosomal protein L15chromosome CDS314461 462 + 0.296537
rplP RF_0285 50S ribosomal protein L16chromosome CDS309861 411 + 0.386861
rplQ RF_0303 50S ribosomal protein L17chromosome CDS318779 381 + 0.307087
rplR RF_0294 50S ribosomal protein L18chromosome CDS313326 357 + 0.282913
rplS RF_0100 50S ribosomal protein L19chromosome CDS113767 417 + 0.342926
rplT RF_0349 50S ribosomal protein L20chromosome CDS368562 354 - 0.358757
rplU RF_1198 50S ribosomal protein L21chromosome CDS1264448 318 + 0.308176
rplV RF_0283 50S ribosomal protein L22chromosome CDS308832 360 + 0.291667
rplW RF_0280 50S ribosomal protein L23chromosome CDS307402 297 + 0.252525
rplX RF_0289 50S ribosomal protein L24chromosome CDS311158 330 + 0.309091
rplY RF_0352 50S ribosomal protein L25chromosome CDS370434 612 + 0.362745
rpmA RF_1199 50S ribosomal protein L27chromosome CDS1264790 261 + 0.398467
rpmB RF_0083 50S ribosomal protein L28chromosome CDS88742 294 + 0.346939
rpmC RF_0286 50S ribosomal protein L29chromosome CDS310264 216 + 0.236111
rpmD RF_0296 50S ribosomal protein L30chromosome CDS314223 225 + 0.257778
rpmE RF_0084 50S ribosomal protein L31chromosome CDS89032 237 + 0.316456
rpmF RF_1236 50S ribosomal protein L32chromosome CDS1301301 201 - 0.363184
rpmG RF_1386 50S ribosomal protein L33chromosome CDS1471482 171 - 0.309942
rpmH RF_0348 50S ribosomal protein L34chromosome CDS368275 135 - 0.348148
rpmI RF_0350 50S ribosomal protein L35chromosome CDS368936 207 - 0.338164
rpmJ RF_0800 50S ribosomal protein L36chromosome CDS850084 126 - 0.230159
rpsA RF_0771 30S ribosomal protein S1chromosome CDS827750 1707 + 0.333333
rpsB RF_0069 30S ribosomal protein S2chromosome CDS75045 888 + 0.331081
rpsC RF_0284 30S ribosomal protein S3chromosome CDS309193 654 + 0.30581
rpsD RF_0549 30S ribosomal protein S4chromosome CDS586704 666 - 0.334835
rpsE RF_0295 30S ribosomal protein S5chromosome CDS313700 531 + 0.355932
rpsF RF_0143 30S ribosomal protein S6chromosome CDS159743 390 - 0.266667
rpsG RF_1154 30S ribosomal protein S7chromosome CDS1229609 480 - 0.35
rpsH RF_0292 30S ribosomal protein S8chromosome CDS312369 399 + 0.273183
rpsI RF_0995 30S ribosomal protein S9chromosome CDS1057238 486 + 0.325103
rpsJ RF_0277 30S ribosomal protein S10chromosome CDS305544 318 + 0.320755
rpsK RF_0301 30S ribosomal protein S11chromosome CDS317342 384 + 0.367188
rpsL RF_1155 30S ribosomal protein S12chromosome CDS1230115 453 - 0.377483
rpsM RF_0300 30S ribosomal protein S13chromosome CDS316940 378 + 0.343915
rpsN RF_0291 30S ribosomal protein S14chromosome CDS312044 306 + 0.313726
rpsO RF_0722 30S ribosomal protein S15chromosome CDS781629 276 - 0.297101
rpsP RF_1385 30S ribosomal protein S16chromosome CDS1471133 336 - 0.395833
rpsQ RF_0287 30S ribosomal protein S17chromosome CDS310466 249 + 0.313253
rpsR RF_0142 30S ribosomal protein S18chromosome CDS159431 288 - 0.326389
rpsS RF_0282 30S ribosomal protein S19chromosome CDS308545 279 + 0.322581
rpsT RF_0304 30S ribosomal protein S20chromosome CDS319208 273 + 0.282051
rpsU RF_0426 30S ribosomal protein S21chromosome CDS452748 201 + 0.358209
rrf RF_1127 Ribosome recycling factorchromosome CDS1195454 561 + 0.368984
rrmJ RF_1118 Ribosomal RNA large subunit methyltransferase Jchromosome CDS1185600 684 - 0.336257
serS RF_1249 Seryl-tRNA synthetasechromosome CDS1320553 1278 + 0.338028
tgt RF_0191 Queuine tRNA-ribosyltransferasechromosome CDS206923 1086 + 0.410681
thrS RF_0979 Threonyl-tRNA synthetasechromosome CDS1036470 1908 + 0.396226
tlyA RF_0876 Hemolysin Achromosome CDS932988 765 - 0.329412
trmD RF_0099 tRNA (guanine-n1)-methyltransferasechromosome CDS113044 705 + 0.380142
trmU RF_0496 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS528722 1098 + 0.407104
trpS RF_0824 Tryptophanyl-tRNA synthetasechromosome CDS871343 993 - 0.328298
truA RF_1356 tRNA pseudouridine synthase Achromosome CDS1445733 738 - 0.360434
truB RF_0723 tRNA pseudouridine synthase Bchromosome CDS781926 1071 - 0.356676
tsf RF_0070 Elongation factor EF-Tschromosome CDS76101 930 + 0.36129
tuf RF_0276 Elongation factor EF-Tuchromosome CDS304264 1185 + 0.388186
tyrS RF_0877 Tyrosyl-tRNA synthetasechromosome CDS933911 1236 - 0.378641
valS RF_0229 Valyl-tRNA synthetasechromosome CDS254106 2580 - 0.359302
ychF RF_0355 GTP-binding protein YchFchromosome CDS372444 1098 + 0.367031
yhbH RF_0697 Probable sigma(54) modulation proteinchromosome CDS755109 579 + 0.279793