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2024-05-19 04:24:58

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Lactobacillus acidophilus NCFM, NCFM

Number of genes found: 140

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Lactobacillus acidophilus NCFM, NCFM
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBA1262 prolyl-tRNA synthetasechromosome CDS1241946 1698 - 0.375147
NA LBA0842 putative 30S ribosomal protein S15chromosome CDS824246 147 + 0.346939
NA LBA0347 glu-tRNA synthetase glurschromosome CDS328066 1500 + 0.377333
NA LBA1269 translation elongation factor Tschromosome CDS1247961 1026 - 0.400585
NA LBA0291 50S ribosomal protein L3chromosome CDS290960 639 + 0.403756
NA LBA0350 tRNA-rRNA methyltransferasechromosome CDS331519 753 + 0.367862
NA LBA0841 30S ribosomal protein S20chromosome CDS823788 258 - 0.379845
NA LBA1824 GTP-binding proteinchromosome CDS1839731 1101 - 0.396912
NA LBA0307 30S ribosomal protein S5chromosome CDS298448 507 + 0.433925
NA LBA1162 asparaginyl-tRNA synthetasechromosome CDS1139258 1245 - 0.360643
NA LBA0293 50S ribosomal protein L23chromosome CDS292230 303 + 0.389439
NA LBA1594 ribosomal large subunit pseudouridine synthasechromosome CDS1587979 846 + 0.335697
NA LBA1255 translation initiation factor IF-2chromosome CDS1232602 2634 - 0.372058
NA LBA0298 50S ribosomal protein L16chromosome CDS294748 441 + 0.414966
NA LBA0375 cytidine-deoxycytidylate deaminasechromosome CDS350778 507 + 0.351085
NA LBA0299 50S ribosomal protein L29chromosome CDS295178 198 + 0.353535
NA LBA1321 methionyl-tRNA formyltransferase FMTchromosome CDS1300305 945 - 0.351323
NA LBA0791 16s pseudouridylate synthasechromosome CDS774249 711 + 0.360056
NA LBA0324 30S ribosomal protein S9chromosome CDS308211 396 + 0.436869
NA LBA0479 hypothetical proteinchromosome CDS471808 702 - 0.310541
NA LBA1319 rRNA methylasechromosome CDS1298987 1368 - 0.320175
NA LBA1328 hemolysin-like proteinchromosome CDS1306787 813 - 0.364084
NA LBA0272 peptidyl-tRNA hydrolasechromosome CDS262905 558 + 0.329749
NA LBA0952 50S Ribosomal protein L32chromosome CDS927153 189 + 0.407407
NA LBA1521 rRNA methylasechromosome CDS1516526 768 - 0.332031
NA LBA0632 RNA methyltransferase familychromosome CDS617546 1383 - 0.347072
NA LBA0769 putative translation factor SUA5 familychromosome CDS754611 1005 + 0.360199
NA LBA0373 hypothetical proteinchromosome CDS349754 621 + 0.309179
NA LBA0348 cys-tRNA synthetase cycrschromosome CDS329663 1434 + 0.352859
NA LBA0845 elongation factor ef-tuchromosome CDS827441 1191 + 0.439127
NA LBA0290 30S ribosomal protein S10chromosome CDS290628 309 + 0.381877
NA LBA0369 50S ribosomal protein L10chromosome CDS347907 513 + 0.405458
NA LBA0313 translational initiation IF-1chromosome CDS301656 222 + 0.337838
NA LBA0294 50S ribosomal protein L2chromosome CDS292548 837 + 0.407407
NA LBA0287 30s ribosomal protein S12chromosome CDS287288 408 + 0.431373
NA LBA0617 ATP-dependent RNA helicase, DEAD-DEAH boxchromosome CDS604098 1239 + 0.332526
NA LBA1508 50s ribosomal protein RL33chromosome CDS1497222 150 - 0.4
NA LBA0370 50S ribosomal protein L7-L12chromosome CDS348469 363 + 0.421488
NA LBA0636 peptide chain release factor 3chromosome CDS621784 1572 + 0.368321
NA LBA0292 50S ribosomal protein L4chromosome CDS291613 618 + 0.386731
NA LBA1668 elongation factorchromosome CDS1690353 576 - 0.373264
NA LBA0830 polypeptide deformylase Pdfchromosome CDS813401 576 - 0.350694
NA LBA0817 isoleucyl-tRNA synthetasechromosome CDS798410 2784 + 0.37069
NA LBA0265 ribosomal proteinchromosome CDS256048 246 + 0.402439
NA LBA0009 30S Ribosomal protein S18chromosome CDS9822 237 + 0.417722
NA LBA0288 30s ribosomal protein S7chromosome CDS287711 471 + 0.409766
NA LBA0314 50S ribosomal protein L36chromosome CDS301894 117 + 0.376068
NA LBA1205 30S ribosomal protein S21chromosome CDS1181218 177 - 0.40678
NA LBA0295 30S ribosomal protein S19chromosome CDS293458 231 + 0.372294
NA LBA0302 50S ribosomal protein L24chromosome CDS296080 234 + 0.350427
NA LBA1289 30S ribosomal protein S16chromosome CDS1266890 273 - 0.432234
NA LBA0209 trp-tRNA synthetasechromosome CDS204306 1023 + 0.358749
NA LBA0301 50S ribosomal protein L14chromosome CDS295692 369 + 0.422764
NA LBA0657 rRNA methylasechromosome CDS643056 555 + 0.322523
NA LBA1270 30s ribosomal proteinS2chromosome CDS1249026 777 - 0.393822
NA LBA0539 RNA methyltransferasechromosome CDS527974 1353 + 0.377679
NA LBA0931 methyltransferasechromosome CDS904532 945 + 0.330159
NA LBA0794 valine-tRNA ligasechromosome CDS776259 2640 + 0.390152
NA LBA0267 ATP-dependent RNA helicase-like proteinchromosome CDS257801 1488 + 0.384409
NA LBA0304 30S ribosomal protein S8chromosome CDS297094 399 + 0.390977
NA LBA1059 putative ribosomal-protein-serine N-acetyltransferasechromosome CDS1042684 516 + 0.317829
NA LBA0316 30S ribosomal protein S11chromosome CDS302407 393 + 0.447837
NA LBA0060 polypeptide deformylasechromosome CDS58261 414 + 0.306763
NA LBA0289 translational elongation factor ef-Gchromosome CDS288215 2094 + 0.411175
NA LBA0360 50S ribosomal protein L1chromosome CDS340056 693 + 0.414141
NA LBA1199 glycyl-tRNA synthetase alpha chainchromosome CDS1176066 918 - 0.372549
NA LBA0822 tRNA-methyltransferasechromosome CDS803504 1128 + 0.385638
NA LBA1198 glycyl-tRNA synthetase beta chainchromosome CDS1174010 2064 - 0.362888
NA LBA0933 putative D-Tyr-tRNAtyr deacylasechromosome CDS908149 438 + 0.326484
NA LBA0216 dimethyladenosine transferasechromosome CDS212786 885 + 0.338983
NA LBA0192 tyr-tRNA synthetasechromosome CDS187222 1263 + 0.384006
NA LBA0276 putative ribosomal protein S1chromosome CDS267682 363 + 0.325069
NA LBA0030 hypothetical proteinchromosome CDS27424 216 + 0.277778
NA LBA0308 50S ribosomal protein L30chromosome CDS298972 186 + 0.354839
NA LBA1286 50S ribosomal protein L19chromosome CDS1265104 348 - 0.431034
NA LBA0303 50S ribosomal protein L5chromosome CDS296328 543 + 0.383057
NA LBA0280 transcriptional regulatorchromosome CDS272619 1029 + 0.417881
NA LBA1626 seryl-tRNA synthetasechromosome CDS1634904 1308 - 0.379969
NA LBA1335 elongation factor EF-Pchromosome CDS1312039 570 - 0.350877
NA LBA0417 ala-tRNA synthetasechromosome CDS393347 2640 + 0.375
NA LBA0309 50S ribosomal protein L15chromosome CDS299181 441 + 0.410431
NA LBA1267 ribosome recycling factor Rrfchromosome CDS1246571 495 - 0.355556
NA LBA0973 tRNA nucleotidyltransferase, polyA polymerase polyAchromosome CDS947348 1200 + 0.335833
NA LBA0416 RNA helicasechromosome CDS391744 1362 + 0.354626
NA LBA0322 tRNA pseudouridine synthase Achromosome CDS306863 789 + 0.335868
NA LBA0300 30S ribosomal protein S17chromosome CDS295394 267 + 0.370787
NA LBA0935 histidyl-tRNA synthetasechromosome CDS908878 1287 + 0.362859
NA LBA1739 hypothetical proteinchromosome CDS1772923 1011 + 0.431256
NA LBA1287 tRNA methyltransferasechromosome CDS1265585 729 - 0.374486
NA LBA0359 50S ribosomal protein L11chromosome CDS339551 426 + 0.41784
NA LBA0540 hypothetical proteinchromosome CDS529808 405 + 0.395062
NA LBA0051 translation elongation factorschromosome CDS45976 1920 + 0.345313
NA LBA0306 50S ribosomal protein L18chromosome CDS298074 357 + 0.408964
NA LBA0305 50S ribosomal protein L6chromosome CDS297517 531 + 0.399247
NA LBA0674 peptide chain release factor 2chromosome CDS661751 999 + 0.365365
NA LBA1256 putative ribosomal protein L7A familychromosome CDS1235240 312 - 0.326923
NA LBA0318 50S ribosomal protein L17chromosome CDS303811 384 + 0.401042
NA LBA1151 pseudouridine synthasechromosome CDS1127186 909 - 0.346535
NA LBA1609 putative mucus binding protein precursorchromosome CDS1601508 1932 - 0.34058
NA LBA0786 30s ribosomal protein S4chromosome CDS769132 612 - 0.413399
NA LBA0281 lys-tRNA synthetase lysrschromosome CDS273663 1551 + 0.39265
NA LBA0297 30S ribosomal protein S3chromosome CDS294074 675 + 0.394074
NA LBA0936 aspartyl-tRNA synthetasechromosome CDS910172 1845 + 0.388618
NA LBA0296 50S ribosomal protein L22chromosome CDS293707 354 + 0.412429
NA LBA0315 30S ribosomal protein S13chromosome CDS302035 351 + 0.421652
NA LBA1348 kanamycin kinasechromosome CDS1321641 783 - 0.35249
NA LBA1095 putative phosphotransferasechromosome CDS1078373 159 + 0.314465
NA LBA0323 50S ribosomal protein L13chromosome CDS307756 444 + 0.405405
NA LBA1627 ribosomal-protein-alanine N-acetyltransferasechromosome CDS1636438 552 - 0.324275
NA LBA0274 hypothetical proteinchromosome CDS266978 243 + 0.304527
NA LBA0968 30S Ribosomal protein S1chromosome CDS941966 1212 + 0.391089
NA LBA0767 peptide chain release factor Ichromosome CDS752694 1086 + 0.35175
ampM LBA0623 methionine aminopeptidasechromosome CDS609386 828 + 0.376812
ansA LBA1687 l-asparaginasechromosome CDS1708202 993 - 0.376636
argS LBA1600 arginyl-tRNA synthetasechromosome CDS1592762 1686 - 0.368327
gatA LBA0532 Glu-tRNAGln amidotransferase subunit Achromosome CDS521117 1440 + 0.390278
gatB LBA0533 glutamyl-tRNAGln amidotransferase subunit Bchromosome CDS522561 1431 + 0.401118
gatC LBA0531 Glu-tRNA(Gln) amidotransferase subunit Cchromosome CDS520809 309 + 0.375405
gidA LBA0982 glucose-inhibited division proteinchromosome CDS956856 1317 + 0.388003
hemK LBA0768 protoporphyrinogen oxidasechromosome CDS753772 843 + 0.346382
infC LBA1538 translational initiation factor IF3chromosome CDS1529379 453 - 0.392936
leuS LBA1617 leucyl-tRNA synthetasechromosome CDS1618591 2415 - 0.389234
miaA LBA1503 tRNA delta(2)-isopentenylpyrophosphatechromosome CDS1494220 921 - 0.356135
pheT LBA1519 phenylalanil-tRNA synthetase alpha chainchromosome CDS1514741 1050 - 0.384762
rbfA LBA1254 ribosome binding factor Achromosome CDS1232217 366 - 0.338798
rimM LBA1288 16S rRNA processing proteinchromosome CDS1266303 516 - 0.315891
rluB LBA0964 ribosomal large subunit pseudouridine synthase Bchromosome CDS938977 717 + 0.333333
rluD LBA0648 ribosomal large subunit pseudouridine synthasechromosome CDS633800 903 + 0.3134
rnpA LBA1978 ribonuclease Pchromosome CDS1992558 369 - 0.401084
rplI LBA0012 50S ribosomal protein L9chromosome CDS12271 456 + 0.377193
rplT LBA1536 50s ribosomal RL20chromosome CDS1528759 357 - 0.414566
rplU LBA1338 50s ribosomal protein RL21chromosome CDS1314232 312 - 0.397436
rpmA LBA1337 50s ribosomal protein RL27chromosome CDS1313923 291 - 0.453608
rpmB LBA1312 50s ribosomal protein RL28chromosome CDS1293326 186 + 0.424731
rpmH LBA1979 50S ribosomal protein L34chromosome CDS1992978 141 - 0.425532
rpmI LBA1537 50s ribosomal RL35chromosome CDS1529157 201 - 0.447761
rpsF LBA0007 30S ribosomal protein S6chromosome CDS8933 297 + 0.407407
thrS LBA1543 theronyl-tRNA synthetasechromosome CDS1531794 1935 - 0.40155
truB LBA1253 tRNA pseudouridine synthase Bchromosome CDS1231273 894 - 0.337808
yvyD LBA0672 putative phosphate starvation inducible protein stressrelatedchromosome CDS658494 543 + 0.35175