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2024-05-06 11:31:54

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Staphylococcus epidermidis RP62A phage SP-beta

Number of genes found: 159

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Staphylococcus epidermidis RP62A phage SP-beta
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SERP0719 cell wall surface anchor family proteinchromosome CDS713669 2475 - 0.414141
NA SERP0668 conserved hypothetical proteinchromosome CDS664186 540 + 0.335185
NA SERP0204 cytidine/deoxycytidylate deaminase family proteinchromosome CDS213774 507 + 0.382643
NA SERP0817 gid proteinchromosome CDS821884 1308 + 0.353976
NA SERP1044 ribosomal protein S1chromosome CDS1089517 1179 - 0.336726
NA SERP2336 lipase, putativechromosome CDS2373203 2187 - 0.349337
NA SERP1435 RNA methyltransferase, TrmA familychromosome CDS1496306 1371 - 0.320934
NA SERP0720 RNA methyltransferase, TrmH familychromosome CDS716482 741 + 0.34413
NA SERP2413 conserved hypothetical proteinchromosome CDS2474977 981 + 0.405708
NA SERP0144 S4 domain proteinchromosome CDS137099 264 + 0.333333
NA SERP1391 RNA methyltransferase, TrmH family, group 2chromosome CDS1447416 471 - 0.322718
NA SERP0541 general stress protein 13chromosome CDS524454 381 + 0.330709
NA SERP1162 conserved hypothetical protein TIGR00253chromosome CDS1198559 294 - 0.268707
NA SERP2236 hypothetical proteinchromosome CDS2266411 600 + 0.256667
NA SERP0185 30S ribosomal protein L7Ae, putativechromosome CDS193563 261 + 0.318008
NA SERP1506 conserved hypothetical proteinchromosome CDS1571053 747 - 0.329317
NA SERP1595 conserved hypothetical proteinchromosome CDS1624978 960 - 0.319792
NA SERP1144 conserved hypothetical proteinchromosome CDS1180162 1347 - 0.344469
NA SERP1722 Sua5/YciO/YrdC/YwlC family proteinchromosome CDS1760057 1044 - 0.340996
NA SERP0146 general stress protein 13chromosome CDS137881 402 + 0.348259
NA SERP1637 conserved domain proteinchromosome CDS1661209 558 + 0.290323
NA SERP0588 ribosomal large subunit pseudouridine synthase, RluD subfamilychromosome CDS580800 855 + 0.34152
NA SERP0679 conserved hypothetical proteinchromosome CDS674711 627 + 0.275917
NA SERP1312 pseudouridine synthase, family 1chromosome CDS1361364 693 - 0.301587
NA SERP1724 modification methylase, HemK familychromosome CDS1761263 837 - 0.323775
NA SERP2311 acetyltransferase, GNAT familychromosome CDS2349132 519 - 0.317919
NA SERP0763 ribosomal large subunit pseudouridine synthase, RluD subfamilychromosome CDS760946 918 + 0.332244
NA SERP0041 conserved hypothetical protein TIGR00092chromosome CDS37608 1098 + 0.363388
NA SERP2470 spermidine N1-acetyltransferase, putativechromosome CDS2523162 498 + 0.273092
NA SERP0334 acetyltransferase, GNAT familychromosome CDS336746 549 + 0.335155
NA SERP0604 conserved hypothetical proteinchromosome CDS596485 510 + 0.307843
NA SERP0172 RNA methyltransferase, TrmH family, group 3chromosome CDS179081 750 + 0.365333
NA SERP0419 ribosomal subunit interface proteinchromosome CDS419849 570 + 0.314035
NA SERP0835 30S ribosomal protein L7Ae, putativechromosome CDS842504 318 + 0.295597
NA SERP0182 conserved hypothetical proteinchromosome CDS185105 609 + 0.338259
NA SERP1688 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1730758 1530 - 0.354248
NA SERP1210 conserved hypothetical proteinchromosome CDS1248041 321 - 0.330218
NA SERP1386 ribosomal large subunit pseudouridine synthase, RluD subfamilychromosome CDS1443141 825 + 0.318788
NA SERP1405 conserved hypothetical proteinchromosome CDS1469792 543 - 0.307551
NA SERP0118 spermidine N1-acetyltransferase, putativechromosome CDS111135 534 + 0.305243
NA SERP1124 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS1162480 1347 - 0.310319
NA SERP0135 endoribonuclease L-PSP, putativechromosome CDS125402 381 + 0.343832
aap SERP2398 accumulation associated proteinchromosome CDS2454490 7194 - 0.411732
alaS SERP1182 alanyl-tRNA synthetasechromosome CDS1214542 2631 - 0.343976
ansA SERP1046 L-asparaginasechromosome CDS1091905 969 + 0.339525
argS SERP0262 arginyl-tRNA synthetasechromosome CDS269127 1662 + 0.345367
asnS SERP1024 asparaginyl-tRNA synthetasechromosome CDS1068035 1293 - 0.350348
aspS SERP1192 aspartyl-tRNA synthetasechromosome CDS1228098 1767 - 0.341822
cysS SERP0170 cysteinyl-tRNA synthetasechromosome CDS177282 1401 + 0.336188
def SERP0678 peptide deformylasechromosome CDS673977 552 - 0.356884
def-2 SERP0781 polypeptide deformylasechromosome CDS780762 489 + 0.331288
dtd SERP1195 D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS1232385 453 - 0.311258
efp SERP1093 translation elongation factor Pchromosome CDS1137966 558 - 0.33871
ermA-1 SERP1220 Tn554, rRNA adenine N-6-methyltransferasechromosome CDS1253251 732 + 0.325137
ermA-2 SERP1343 Tn554, rRNA adenine N-6-methyltransferasechromosome CDS1399689 732 + 0.325137
ermA-3 SERP2510 rRNA adenine N-6-methyltransferasechromosome CDS2566960 732 - 0.325137
fmt SERP0782 methionyl-tRNA formyltransferasechromosome CDS781243 933 + 0.367631
frr SERP0826 ribosome recycling factorchromosome CDS830179 555 + 0.338739
fusA SERP0188 translation elongation factor Gchromosome CDS194988 2082 + 0.379923
gatA SERP1438 glutamyl-tRNA(Gln) amidotransferase, A subunitchromosome CDS1500371 1458 - 0.340878
gatB SERP1437 glutamyl-tRNA(Gln) amidotransferase, B subunitchromosome CDS1498931 1428 - 0.331933
gatC SERP1439 glutamyl-tRNA(Gln) amidotransferase, C subunitchromosome CDS1501830 303 - 0.349835
geh-1 SERP2297 lipasechromosome CDS2337843 2067 - 0.342525
gltX SERP0168 glutamyl-tRNA synthetasechromosome CDS174830 1455 + 0.347766
glyS SERP1132 glycyl-tRNA synthetasechromosome CDS1170931 1392 + 0.336207
hisS SERP1193 histidyl-tRNA synthetasechromosome CDS1229867 1275 - 0.323922
ileS SERP0758 isoleucyl-tRNA synthetasechromosome CDS755578 2751 + 0.344602
infA SERP1809 translation initiation factor IF-1chromosome CDS1850852 219 - 0.333333
infB SERP0836 translation initiation factor IF-2chromosome CDS842826 2163 + 0.340268
infC SERP1244 translation initiation factor IF-3chromosome CDS1278926 528 - 0.335227
ksgA SERP0131 dimethyladenosine transferasechromosome CDS122047 891 + 0.340067
leuS SERP1318 leucyl-tRNA synthetasechromosome CDS1377441 2415 - 0.347412
lysS SERP0156 lysyl-tRNA synthetasechromosome CDS147452 1488 + 0.343414
map SERP1426 methionine aminopeptidase, type Ichromosome CDS1487661 756 - 0.357143
miaA SERP0870 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS885127 999 + 0.316316
miaB SERP0860 tRNA-i(6)A37 modification enzyme MiaBchromosome CDS871516 1545 + 0.330744
papS SERP1027 polyA polymerasechromosome CDS1073139 1203 - 0.318371
pheS SERP0721 phenylalanyl-tRNA synthetase, alpha subunitchromosome CDS717590 1059 + 0.344665
pnp SERP0841 polyribonucleotide nucleotidyltransferasechromosome CDS848204 2106 + 0.373219
prfA SERP1725 peptide chain release factor 1chromosome CDS1762086 1077 - 0.350046
prfB SERP0421 peptide chain release factor 2chromosome CDS423814 1117 + 0.348254
prfC SERP0609 peptide chain release factor 3chromosome CDS601848 1563 + 0.334613
prmA SERP1146 ribosomal protein L11 methyltransferasechromosome CDS1182268 939 - 0.300319
proS SERP0830 prolyl-tRNA synthetasechromosome CDS834049 1704 + 0.343897
pth SERP0140 peptidyl-tRNA hydrolasechromosome CDS130306 573 + 0.343805
queA SERP1204 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1243180 1026 - 0.351852
rbfA SERP0837 ribosome-binding factor Achromosome CDS845291 351 + 0.31339
rimM SERP0805 16S rRNA processing protein RimMchromosome CDS806687 504 + 0.315476
rluB SERP1056 pseudouridine synthase RluBchromosome CDS1102573 738 - 0.322493
rnpA SERP0002 ribonuclease P protein componentchromosome CDS836 348 + 0.307471
rplA SERP0179 ribosomal protein L1chromosome CDS183037 696 + 0.375
rplB SERP1828 ribosomal protein L2chromosome CDS1859633 834 - 0.392086
rplC SERP1831 ribosomal protein L3chromosome CDS1861422 663 - 0.374057
rplD SERP1830 ribosomal protein L4chromosome CDS1860770 624 - 0.378205
rplE SERP1819 ribosomal protein L5chromosome CDS1855983 540 - 0.344444
rplF SERP1816 ribosomal protein L6chromosome CDS1854785 537 - 0.35568
rplI SERP2538 ribosomal protein L9chromosome CDS2595972 447 - 0.342282
rplJ SERP0180 ribosomal protein L10chromosome CDS184007 501 + 0.381238
rplK SERP0178 ribosomal protein L11chromosome CDS182402 423 + 0.394799
rplL SERP0181 ribosomal protein L7/L12chromosome CDS184545 369 + 0.349593
rplM SERP1799 ribosomal protein L13chromosome CDS1844203 438 - 0.349315
rplN SERP1821 ribosomal protein L14chromosome CDS1856907 369 - 0.390244
rplO SERP1812 ribosomal protein L15chromosome CDS1853215 441 - 0.394558
rplP SERP1824 ribosomal protein L16chromosome CDS1857793 435 - 0.395402
rplQ SERP1804 ribosomal protein L17chromosome CDS1848501 369 - 0.371274
rplR SERP1815 ribosomal protein L18chromosome CDS1854391 363 - 0.347107
rplS SERP0807 ribosomal protein L19chromosome CDS808032 351 + 0.378917
rplT SERP1242 ribosomal protein L20chromosome CDS1278290 357 - 0.35014
rplU SERP1211 ribosomal protein L21chromosome CDS1248366 309 - 0.349515
rplV SERP1826 ribosomal protein L22chromosome CDS1858907 354 - 0.364407
rplW SERP1829 ribosomal protein L23chromosome CDS1860495 276 - 0.336957
rplX SERP1820 ribosomal protein L24chromosome CDS1856548 318 - 0.336478
rplY SERP0139 ribosomal protein L25chromosome CDS129394 660 + 0.345455
rpmA SERP1209 ribosomal protein L27chromosome CDS1247745 285 - 0.396491
rpmB SERP0790 ribosomal protein L28chromosome CDS789876 189 - 0.386243
rpmC SERP1823 ribosomal protein L29chromosome CDS1857594 210 - 0.357143
rpmD SERP1813 ribosomal protein L30chromosome CDS1853672 183 - 0.333333
rpmE SERP1727 ribosomal protein L31chromosome CDS1764048 258 - 0.344961
rpmF SERP0718 ribosomal protein L32chromosome CDS713016 174 + 0.350575
rpmG-1 SERP0175 ribosomal protein L33chromosome CDS181123 144 + 0.354167
rpmG-2 SERP0904 ribosomal protein L33chromosome CDS916157 150 + 0.3
rpmG-3 SERP1116 ribosomal protein L33chromosome CDS1155527 150 - 0.3
rpmH SERP0001 ribosomal protein L34chromosome CDS540 138 + 0.376812
rpmI SERP1243 ribosomal protein L35chromosome CDS1278698 201 - 0.308458
rpmJ SERP1808 ribosomal protein L36chromosome CDS1850707 114 - 0.298246
rpsB SERP0823 ribosomal protein S2chromosome CDS827481 789 + 0.351077
rpsC SERP1825 ribosomal protein S3chromosome CDS1858230 654 - 0.363914
rpsD SERP1284 ribosomal protein S4chromosome CDS1328357 603 + 0.363184
rpsE SERP1814 ribosomal protein S5chromosome CDS1853871 501 - 0.389222
rpsF SERP0044 ribosomal protein S6chromosome CDS40397 297 + 0.329966
rpsG SERP0187 ribosomal protein S7chromosome CDS194398 471 + 0.386412
rpsH SERP1817 ribosomal protein S8chromosome CDS1855346 399 - 0.33584
rpsI SERP1798 ribosomal protein S9chromosome CDS1843791 393 - 0.391858
rpsJ SERP1832 ribosomal protein S10chromosome CDS1862112 309 - 0.339806
rpsK SERP1806 ribosomal protein S11chromosome CDS1849907 390 - 0.405128
rpsL SERP0186 ribosomal protein S12chromosome CDS193914 414 + 0.374396
rpsM SERP1807 ribosomal protein S13/S18chromosome CDS1850319 366 - 0.371585
rpsN-1 SERP0905 ribosomal protein S14chromosome CDS916473 270 + 0.318519
rpsN-2 SERP1818 ribosomal protein S14chromosome CDS1855775 186 - 0.387097
rpsO SERP0840 ribosomal protein S15chromosome CDS847803 270 + 0.351852
rpsP SERP0804 ribosomal protein S16chromosome CDS806285 276 + 0.358696
rpsQ SERP1822 ribosomal protein S17chromosome CDS1857306 264 - 0.310606
rpsR SERP0046 ribosomal protein S18chromosome CDS41270 243 + 0.378601
rpsS SERP1827 ribosomal protein S19chromosome CDS1859288 279 - 0.369176
rpsT SERP1153 ribosomal protein S20chromosome CDS1191458 252 + 0.309524
rpsU SERP1143 ribosomal protein S21chromosome CDS1179860 177 - 0.316384
serS SERP2545 seryl-tRNA synthetasechromosome CDS2603756 1287 - 0.347319
sun SERP0783 sun proteinchromosome CDS782172 1308 + 0.308868
tgt SERP1203 queuine tRNA-ribosyltransferasechromosome CDS1242020 1140 - 0.357018
thrS SERP1246 threonyl-tRNA synthetasechromosome CDS1281592 1938 - 0.336945
trmD SERP0806 tRNA (guanine-N1)-methyltransferasechromosome CDS807190 738 + 0.350949
trmU SERP1185 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1220766 1119 - 0.34227
trpS SERP0575 tryptophanyl-tRNA synthetasechromosome CDS569129 990 - 0.342424
truA SERP1800 tRNA pseudouridine synthase Achromosome CDS1844901 804 - 0.34204
truB SERP0838 tRNA pseudouridine synthase Bchromosome CDS845779 918 + 0.310458
tsf SERP0824 translation elongation factor Tschromosome CDS828421 879 + 0.354949
tuf SERP0189 translation elongation factor Tuchromosome CDS197288 1185 + 0.407595
tyrS SERP1293 tyrosyl-tRNA synthetasechromosome CDS1338682 1266 - 0.334913
valS SERP1228 valyl-tRNA synthetasechromosome CDS1261239 2631 - 0.334474