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2024-05-14 22:46:16

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN

Number of genes found: 114

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Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
alaS BPEN_174 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS222183 2640 + 0.297348
argS BPEN_468 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS559209 1746 + 0.290378
asnS BPEN_433 asparaginyl-tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome CDS508697 1413 + 0.314225
aspS BPEN_467 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA ligase; EC=6.1.1.12; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; chromosome CDS556853 1725 - 0.310725
cca BPEN_064 tRNA nucleotidyltransferaseRecName: Full=CCA-adding enzyme; EC=2.7.7.72; AltName: Full=CCA tRNA nucleotidyltransferase; AltName: Full=tRNA CCA-pyrophosphorylase; AltName: Full=tRNA adenylyl-/cytidylyl- transferase; AltName: Full=tRNA nucleotidyltransferase; AltName: Full=tRNA-NT; chromosome CDS75623 1227 - 0.336593
cysS BPEN_312 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS369936 1422 + 0.292546
deaD BPEN_113 cold-shock DeaD box ATP-dependent RNA helicaseSubName: Full=Cold-shock DeaD box ATP-dependent RNA helicase; chromosome CDS133041 1710 + 0.31462
def BPEN_226 polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS257858 522 - 0.250958
efp BPEN_074 elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome CDS87508 567 + 0.319224
fmt BPEN_225 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS256879 969 - 0.335397
frr BPEN_282 ribosome recycling factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS327793 567 + 0.271605
fusA BPEN_585 elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS702056 2115 - 0.365012
glnS BPEN_332 glutaminyl-tRNA synthetaseSubName: Full=Glutaminyl-tRNA synthetase; chromosome CDS392299 1659 + 0.312839
gltX BPEN_521 glutamate tRNA synthetase, catalytic subunitRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS623765 1407 - 0.307747
glyQ BPEN_019 glycine-tRNA synthetase, alpha subunitRecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; chromosome CDS21218 915 + 0.311475
glyS BPEN_020 glycine-tRNA synthetase, beta subunitRecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; chromosome CDS22156 2088 + 0.291667
hemK BPEN_360 N5-glutamine methyltransferaseRecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; chromosome CDS425049 837 + 0.314217
hisS BPEN_550 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS658032 1317 - 0.312073
ileS BPEN_122 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS146107 2829 + 0.323789
infA BPEN_399 translation initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS472511 219 + 0.342466
infB BPEN_108 translation initiation factor IF2-2RecName: Full=Translation initiation factor IF-2; chromosome CDS125595 2676 + 0.341928
infC BPEN_363 translation initiation factor IF-3RecName: Full=Translation initiation factor IF-3; chromosome CDS430465 540 + 0.333333
ksgA BPEN_130 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS158188 804 - 0.282338
leuS BPEN_321 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS379823 2619 - 0.323788
lysS BPEN_270 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS307702 1530 + 0.303268
map BPEN_278 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS324077 783 - 0.325671
metG BPEN_486 methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS579039 1668 + 0.318345
miaA BPEN_081 delta(2)-isopentenylpyrophosphate tRNA-adenosine transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS96505 915 + 0.31694
pheS BPEN_366 phenylalanine tRNA synthetase, alpha-subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS431885 996 + 0.296185
pnp BPEN_112 polynucleotide phosphorylaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS130316 2100 + 0.338095
prfA BPEN_359 peptide chain release factor 1 (RF-1)RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS423967 1083 + 0.34349
prfB BPEN_269 peptide chain release factor 2 (RF-2)SubName: Full=Peptide chain release factor 2 (RF-2); chromosome CDS306663 1047 + 0.315186
proS BPEN_297 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS346510 1746 - 0.310424
pth BPEN_355 peptidyl-tRNA hydrolaseSubName: Full=Peptidyl-tRNA hydrolase; chromosome CDS419924 594 - 0.279461
rbfA BPEN_109 30S ribosome-binding factorRecName: Full=Ribosome-binding factor A; chromosome CDS128361 360 + 0.291667
rimM BPEN_180 16S rRNA processing proteinRecName: Full=Ribosome maturation factor RimM; chromosome CDS227396 570 + 0.294737
rlmB BPEN_087 probable tRNA/rRNA methyltransferaseRecName: Full=23S rRNA (guanosine-2-O-)-methyltransferase RlmB; EC=2.1.1.185; AltName: Full=23S rRNA (guanosine2251 2-O)-methyltransferase; AltName: Full=23S rRNA Gm2251 2-O-methyltransferase; chromosome CDS103280 744 + 0.342742
rluC BPEN_421 ribosomal large subunit (23S) pseudouridine synthase CRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS496794 1017 - 0.282203
rluD BPEN_187 pseudouridine synthaseRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS234005 1032 + 0.312016
rmpH BPEN_014 50S ribosomal subunit protein L34RecName: Full=50S ribosomal protein L34; chromosome CDS14666 153 - 0.392157
rmpJ BPEN_219 50S ribosomal subunit protein L36RecName: Full=50S ribosomal protein L36; chromosome CDS253758 117 + 0.367521
rne BPEN_422 ribonuclease ERecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; chromosome CDS498327 2601 + 0.318724
rnpA BPEN_013 RNase P, protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS14295 348 - 0.310345
rplA BPEN_580 50S ribosomal subunit protein L1RecName: Full=50S ribosomal protein L1; chromosome CDS698574 708 - 0.30791
rplB BPEN_201 50S ribosomal subunit protein L2RecName: Full=50S ribosomal protein L2; chromosome CDS244971 828 + 0.390097
rplC BPEN_198 50S ribosomal subunit protein L3RecName: Full=50S ribosomal protein L3; chromosome CDS243362 654 + 0.345566
rplD BPEN_199 50S ribosomal subunit protein L4RecName: Full=50S ribosomal protein L4; chromosome CDS244016 633 + 0.314376
rplE BPEN_210 50S ribosomal subunit protein L5RecName: Full=50S ribosomal protein L5; chromosome CDS248969 540 + 0.309259
rplF BPEN_213 50S ribosomal subunit protein L6RecName: Full=50S ribosomal protein L6; chromosome CDS250263 567 + 0.335097
rplI BPEN_090 50S ribosomal subunit protein L9RecName: Full=50S ribosomal protein L9; chromosome CDS105066 462 + 0.307359
rplJ BPEN_579 50S ribosomal subunit protein L10RecName: Full=50S ribosomal protein L10; chromosome CDS697734 492 - 0.313008
rplK BPEN_581 50S ribosomal subunit protein L11RecName: Full=50S ribosomal protein L11; chromosome CDS699287 432 - 0.333333
rplL BPEN_578 50S ribosomal subunit protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome CDS697272 369 - 0.341463
rplM BPEN_050 50S ribosomal subunitprotein L13RecName: Full=50S ribosomal protein L13; chromosome CDS61354 435 + 0.314943
rplN BPEN_208 50S ribosomal subunit protein L14RecName: Full=50S ribosomal protein L14; chromosome CDS248249 372 + 0.376344
rplO BPEN_217 50S ribosomal subunit protein L15RecName: Full=50S ribosomal protein L15; chromosome CDS251937 435 + 0.370115
rplP BPEN_205 50S ribosomal subunit protein L16RecName: Full=50S ribosomal protein L16; chromosome CDS247241 405 + 0.37037
rplQ BPEN_224 50S ribosomal subunit protein L17RecName: Full=50S ribosomal protein L17; chromosome CDS256441 378 + 0.31746
rplR BPEN_214 50S ribosomal subunit protein L18RecName: Full=50S ribosomal protein L18; chromosome CDS250861 354 + 0.327684
rplS BPEN_182 50S ribosomal subunit protein L19RecName: Full=50S ribosomal protein L19; chromosome CDS228767 351 + 0.336182
rplT BPEN_365 50S ribosomal subunit protein L20RecName: Full=50S ribosomal protein L20; chromosome CDS431338 363 + 0.349862
rplU BPEN_096 50S ribosomal subunit protein L21RecName: Full=50S ribosomal protein L21; chromosome CDS114559 318 + 0.31761
rplV BPEN_203 50S ribosomal subunit protein L22RecName: Full=50S ribosomal protein L22; chromosome CDS246156 330 + 0.306061
rplW BPEN_200 50S ribosomal subunit protein L23RecName: Full=50S ribosomal protein L23; chromosome CDS244645 303 + 0.287129
rplX BPEN_209 50S ribosomal subunit protein L24RecName: Full=50S ribosomal protein L24; chromosome CDS248636 321 + 0.28972
rplY BPEN_488 50S ribosomal subunit protein L25RecName: Full=50S ribosomal protein L25; chromosome CDS583227 294 + 0.295918
rpmA BPEN_097 50S ribosomal subunit protein L27RecName: Full=50S ribosomal protein L27; chromosome CDS114922 255 + 0.380392
rpmB BPEN_636 50S ribosomal subunit protein L28RecName: Full=50S ribosomal protein L28; chromosome CDS759889 228 - 0.372807
rpmC BPEN_206 50S ribosomal subunit protein L29RecName: Full=50S ribosomal protein L29; chromosome CDS247645 213 + 0.234742
rpmE BPEN_621 50S ribosomal subunit protein L31RecName: Full=50S ribosomal protein L31; chromosome CDS743051 249 - 0.269076
rpmF BPEN_420 50S ribosomal subunit protein L32RecName: Full=50S ribosomal protein L32; chromosome CDS495727 171 - 0.415205
rpmG BPEN_635 50S ribosomal subunit protein L33RecName: Full=50S ribosomal protein L33; chromosome CDS759697 168 - 0.285714
rpmI BPEN_364 50S ribosomal subunit protein L35RecName: Full=50S ribosomal protein L35; chromosome CDS431067 198 + 0.252525
rpsA BPEN_391 30S ribosomal subunit protein S1RecName: Full=30S ribosomal protein S1; chromosome CDS459768 1695 - 0.343953
rpsB BPEN_279 30S ribosomal subunit protein S2RecName: Full=30S ribosomal protein S2; chromosome CDS325186 687 + 0.3377
rpsC BPEN_204 30S ribosomal subunit protein S3RecName: Full=30S ribosomal protein S3; chromosome CDS246519 711 + 0.372714
rpsD BPEN_222 30S ribosomal subunit protein S4RecName: Full=30S ribosomal protein S4; chromosome CDS254750 624 + 0.328526
rpsE BPEN_215 30S ribosomal subunit protein S5RecName: Full=30S ribosomal protein S5; chromosome CDS251230 525 + 0.352381
rpsF BPEN_088 30S ribosomal subunit protein S6RecName: Full=30S ribosomal protein S6; chromosome CDS104194 354 + 0.30226
rpsG BPEN_586 30S ribosomal subunit protein S7RecName: Full=30S ribosomal protein S7; chromosome CDS704294 471 - 0.375796
rpsH BPEN_212 30S ribosomal subunit protein S8RecName: Full=30S ribosomal protein S8; chromosome CDS249878 396 + 0.315657
rpsI BPEN_051 30S ribosomal subunit protein S9RecName: Full=30S ribosomal protein S9; chromosome CDS61816 399 + 0.35589
rpsJ BPEN_197 30S ribosomal subunit protein S10RecName: Full=30S ribosomal protein S10; chromosome CDS242945 312 + 0.403846
rpsK BPEN_221 30S ribosomal subunit protein S11RecName: Full=30S ribosomal protein S11; chromosome CDS254320 393 + 0.414758
rpsL BPEN_587 30S ribosomal subunit protein S12RecName: Full=30S ribosomal protein S12; chromosome CDS704916 375 - 0.418667
rpsM BPEN_220 30S ribosomal subunit protein S13RecName: Full=30S ribosomal protein S13; chromosome CDS253923 366 + 0.374317
rpsN BPEN_211 30S ribosomal subunit protein S14RecName: Full=30S ribosomal protein S14; chromosome CDS249541 306 + 0.382353
rpsO BPEN_111 30S ribosomal subunit protein S15RecName: Full=30S ribosomal protein S15; chromosome CDS129869 270 + 0.3
rpsP BPEN_179 30S ribosomal subunit protein S16RecName: Full=30S ribosomal protein S16; chromosome CDS227157 243 + 0.329218
rpsQ BPEN_207 30S ribosomal subunit protein S17RecName: Full=30S ribosomal protein S17; chromosome CDS247872 255 + 0.298039
rpsR BPEN_089 30S ribosomal subunit protein S18RecName: Full=30S ribosomal protein S18; chromosome CDS104772 240 + 0.3625
rpsS BPEN_202 30S ribosomal subunit protein S19RecName: Full=30S ribosomal protein S19; chromosome CDS245825 282 + 0.35461
rpsT BPEN_120 30S ribosomal subunit protein S20RecName: Full=30S ribosomal protein S20; chromosome CDS144617 267 - 0.35206
rpsU BPEN_059 30S ribosomal subunit protein S21RecName: Full=30S ribosomal protein S21; chromosome CDS71861 216 - 0.319444
rrmJ BPEN_100 Ribosomal RNA large subunit (23S) methyltransferase JRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome CDS117742 627 + 0.365231
serS BPEN_395 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS465241 1287 - 0.334887
smpA BPEN_566 small membrane protein ASubName: Full=Small membrane protein A; chromosome CDS676582 339 + 0.283186
tadA BPEN_557 tRNA-specific adenosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS667443 468 - 0.348291
tgt BPEN_236 tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS266542 1107 + 0.33785
thrS BPEN_362 threonyl-tRNA synthetaseSubName: Full=Threonyl-tRNA synthetase; chromosome CDS429232 1227 + 0.312958
tolA BPEN_347 TolASubName: Full=TolA; chromosome CDS410688 1185 + 0.332489
trmD BPEN_181 tRNA(guanine-N1)methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS227992 768 + 0.339844
trmU BPEN_404 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS479466 1104 + 0.327899
trpS BPEN_589 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome CDS708033 999 - 0.288288
truA BPEN_512 tRNA pseudouridine synthase ARecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS613072 786 - 0.361323
truB BPEN_110 tRNA pseudouridine 5S synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS128757 783 + 0.320562
tsf BPEN_280 protein chain elongation factor TsRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS325958 819 + 0.290598
tuf BPEN_584 elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS700810 1185 - 0.372996
tyrS BPEN_382 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS448260 1284 + 0.301402
valS BPEN_033 valine tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS40789 2874 - 0.30167
ychF BPEN_354 putative GTP-binding protein with nucleoside triP hydrolase domainSubName: Full=Putative GTP-binding protein with nucleoside triP hydrolase domain; chromosome CDS418754 1077 - 0.290622
yfcB BPEN_515 N5-glutamine methyltransferase, modifies ribosomal protein L3SubName: Full=N5-glutamine methyltransferase, modifies ribosomal protein L3; chromosome CDS617740 915 + 0.311475
yjgF BPEN_031 putative translation initiation inhibitorSubName: Full=Putative translation initiation inhibitor; chromosome CDS39009 402 - 0.318408
yrdC BPEN_227 putative RNA-binding protein with unique protein fold, with YrdC/RibB domainRecName: Full=Threonylcarbamoyl-AMP synthase; Short=TC-AMP synthase; EC=2.7.7.87; AltName: Full=L-threonylcarbamoyladenylate synthase; AltName: Full=t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaC; AltName: Full=tRNA threonylcarbamoyladenosine biosynthesis protein TsaC; chromosome CDS258767 585 + 0.347009