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2024-05-19 22:41:50

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Borrelia garinii PBi, PBi

Number of genes found: 118

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Borrelia garinii PBi, PBi
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BG0840 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome linear CDS863674 948 + 0.276371
NA BG0228 conserved hypothetical proteinRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome linear CDS228169 1002 + 0.273453
NA BG0720 conserved hypothetical proteinRecName: Full=Ribosome maturation factor RimM; chromosome linear CDS739129 501 + 0.293413
NA BG0021 S-adenosylmethionine: tRNA ribosyltransferase-isomeraseRecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; chromosome linear CDS19905 1041 - 0.289145
NA BG0682 lysyl-tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome linear CDS700321 1566 - 0.304598
NA BG0803 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS820798 321 + 0.264798
NA BG0018 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome linear CDS16652 984 - 0.26626
NA BG0705 conserved hypothetical proteinRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome linear CDS724982 1068 - 0.280899
NA BGA44 hypothetical proteinSubName: Full=Uncharacterized protein; lp54 CDS31501 471 + 0.295117
NA BG0758 histidine phosphokinase/phophatase, putativeRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome linear CDS779639 990 + 0.282828
NA BG0131 conserved hypothetical proteinRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome linear CDS124640 750 - 0.278667
NA BG0238 conserved hypothetical GTP-binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome linear CDS238088 1107 - 0.301716
NA BG0195 HemK family methylase, putativeSubName: Full=HemK family methylase, putative; chromosome linear CDS194468 822 + 0.262774
NA BG0073 peptide chain release factor 2SubName: Full=Peptide chain release factor 2; chromosome linear CDS69997 1053 + 0.311491
NA BG0756 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome linear CDS777535 1014 - 0.291913
alaS BG0223 alanyl-tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome linear CDS223767 1785 - 0.327171
argS BG0607 arginyl-tRNA synthetaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome linear CDS615954 1758 - 0.28157
asnS BG0102 asparaginyl-tRNA synthetaseRecName: Full=Asparagine--tRNA ligase; EC=6.1.1.22; AltName: Full=Asparaginyl-tRNA synthetase; Short=AsnRS; chromosome linear CDS98636 1389 + 0.307415
aspS BG0454 aspartyl-tRNA synthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; chromosome linear CDS467793 1761 - 0.286769
ctc BG0811 general stress proteinRecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome linear CDS825125 549 + 0.338798
cysS BG0612 cysteinyl-tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome linear CDS623917 1443 + 0.277893
dbpB BGA22 decorin binding protein BSubName: Full=Decorin binding protein B; lp54 CDS17077 555 - 0.315315
def BG0064 polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome linear CDS59872 561 - 0.294118
efp BG0217 translation elongation factor PRecName: Full=Elongation factor P; Short=EF-P; chromosome linear CDS218006 579 - 0.338515
fmt BG0063 methionyl-tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome linear CDS58928 948 - 0.311181
frr BG0122 ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome linear CDS118204 555 - 0.304505
ftsJ BG0316 cell division proteinRecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; chromosome linear CDS318501 579 - 0.278066
fus-1 BG0550 translation elongation factor GRecName: Full=Elongation factor G 1; Short=EF-G 1; chromosome linear CDS551802 2082 - 0.352546
fus-2 BG0715 translation elongation factor GRecName: Full=Elongation factor G 2; Short=EF-G 2; chromosome linear CDS733712 2010 + 0.302985
gatA BG0343 Glu-tRNA(Gln) amidotransferase, subunit ARecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome linear CDS348345 1446 - 0.305671
gatB BG0342 Glu-tRNA(Gln) amidotransferase, subunit BRecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome linear CDS346898 1458 - 0.314815
gatC BG0344 Glu-tRNA(Gln) amidotransferase, subunit CSubName: Full=Glu-tRNA(Gln) amidotransferase, subunit C; chromosome linear CDS349801 276 - 0.231884
gltX BG0371 glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome linear CDS380672 1473 - 0.304141
glyS BG0370 glycyl-tRNA synthetaseRecName: Full=Glycine--tRNA ligase; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase; Short=GlyRS; chromosome linear CDS379317 1338 - 0.319133
hisS BG0137 histidyl-tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome linear CDS132293 1371 - 0.283735
hisT BG0012 pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome linear CDS11271 741 + 0.271255
ileS BG0858 isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome linear CDS883026 3129 - 0.291467
infA BG0168 translation initiation factor 1RecName: Full=Translation initiation factor IF-1; chromosome linear CDS170858 222 + 0.31982
infB BG0827 translation initiation factor 2RecName: Full=Translation initiation factor IF-2; chromosome linear CDS846378 2652 + 0.337858
infC BG0189 translation initiation factor 3RecName: Full=Translation initiation factor IF-3; chromosome linear CDS188892 561 - 0.317291
ksgA BG0603 dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome linear CDS610998 846 - 0.247045
leuS BG0254 leucyl-tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome linear CDS255253 2523 + 0.308363
map BG0106 methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome linear CDS102836 756 - 0.337302
miaA BG0846 2-methylthio-N6-isopentyladenosine tRNA modification enzymeRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome linear CDS868573 921 + 0.27253
papS BG0728 polynucleotide adenylyltransferaseSubName: Full=Polynucleotide adenylyltransferase; chromosome linear CDS743290 1233 - 0.218167
pheS BG0524 phenylalanyl-tRNA synthetase, alpha subunitRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; chromosome linear CDS525306 1563 + 0.319258
pheT BG0525 phenylalanyl-tRNA synthetase, beta subunitRecName: Full=Phenylalanine--tRNA ligase beta subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase beta subunit; Short=PheRS; chromosome linear CDS526856 1701 + 0.289242
pnpA BG0831 polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome linear CDS850735 2148 + 0.343575
prfA BG0194 peptide chain release factor 1RecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome linear CDS193392 1074 + 0.28771
proS BG0405 prolyl-tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome linear CDS414958 1467 - 0.334697
pth BG0812 peptidyl-tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome linear CDS825687 558 + 0.304659
rbfA BG0828 ribosome-binding factor ARecName: Full=Ribosome-binding factor A; chromosome linear CDS849053 363 + 0.261708
rnpA BG0448 ribonuclease P protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome linear CDS462264 336 + 0.244048
rplA BG0393 ribosomal protein L1RecName: Full=50S ribosomal protein L1; chromosome linear CDS406829 681 - 0.30837
rplB BG0493 ribosomal protein L2RecName: Full=50S ribosomal protein L2; chromosome linear CDS500533 834 + 0.371703
rplC BG0489 ribosomal protein L3RecName: Full=50S ribosomal protein L3; chromosome linear CDS498935 621 + 0.359098
rplD BG0490 ribosomal protein L4RecName: Full=50S ribosomal protein L4; chromosome linear CDS499565 630 + 0.320635
rplE BG0502 ribosomal protein L5RecName: Full=50S ribosomal protein L5; chromosome linear CDS504509 549 + 0.318761
rplF BG0505 ribosomal protein L6RecName: Full=50S ribosomal protein L6; chromosome linear CDS505686 543 + 0.320442
rplI BG0113 ribosomal protein L9RecName: Full=50S ribosomal protein L9; chromosome linear CDS110897 501 - 0.279441
rplJ BG0392 ribosomal protein L10RecName: Full=50S ribosomal protein L10; chromosome linear CDS406336 489 - 0.296524
rplK BG0394 ribosomal protein L11RecName: Full=50S ribosomal protein L11; chromosome linear CDS407509 432 - 0.365741
rplL BG0391 ribosomal protein L7/L12RecName: Full=50S ribosomal protein L7/L12; chromosome linear CDS405891 375 - 0.384
rplM BG0340 ribosomal protein L13RecName: Full=50S ribosomal protein L13; chromosome linear CDS345579 465 - 0.331183
rplN BG0500 ribosomal protein L14RecName: Full=50S ribosomal protein L14; chromosome linear CDS503815 369 + 0.360434
rplO BG0509 ribosomal protein L15RecName: Full=50S ribosomal protein L15; chromosome linear CDS507426 438 + 0.33105
rplP BG0497 ribosomal protein L16RecName: Full=50S ribosomal protein L16; chromosome linear CDS502911 417 + 0.378897
rplQ BG0515 ribosomal protein L17RecName: Full=50S ribosomal protein L17; chromosome linear CDS511193 372 + 0.282258
rplR BG0506 ribosomal protein L18RecName: Full=50S ribosomal protein L18; chromosome linear CDS506246 360 + 0.297222
rplS BG0722 ribosomal protein L19RecName: Full=50S ribosomal protein L19; chromosome linear CDS740323 366 + 0.306011
rplT BG0187 ribosomal protein L20RecName: Full=50S ribosomal protein L20; chromosome linear CDS188301 348 - 0.33046
rplU BG0802 ribosomal protein L21RecName: Full=50S ribosomal protein L21; chromosome linear CDS820481 312 + 0.275641
rplV BG0495 ribosomal protein L22RecName: Full=50S ribosomal protein L22; chromosome linear CDS501623 402 + 0.340796
rplW BG0492 ribosomal protein L23RecName: Full=50S ribosomal protein L23; chromosome linear CDS500215 297 + 0.299663
rplX BG0501 ribosomal protein L24RecName: Full=50S ribosomal protein L24; chromosome linear CDS504198 306 + 0.27451
rpmA BG0804 ribosomal protein L27RecName: Full=50S ribosomal protein L27; chromosome linear CDS821118 246 + 0.337398
rpmB BG0351 ribosomal protein L28RecName: Full=50S ribosomal protein L28; chromosome linear CDS357965 279 - 0.308244
rpmC BG0498 ribosomal protein L29RecName: Full=50S ribosomal protein L29; chromosome linear CDS503330 201 + 0.258706
rpmE BG0232 ribosomal protein L31RecName: Full=50S ribosomal protein L31 type B; chromosome linear CDS234238 246 - 0.300813
rpmF BG0725 ribosomal protein L32RecName: Full=50S ribosomal protein L32; chromosome linear CDS742134 183 + 0.31694
rpmG BG0398 ribosomal protein L33RecName: Full=50S ribosomal protein L33; chromosome linear CDS408848 180 - 0.311111
rpmH BG0447 ribosomal protein L34RecName: Full=50S ribosomal protein L34; chromosome linear CDS462128 156 + 0.333333
rpmI BG0188 ribosomal protein L35RecName: Full=50S ribosomal protein L35; chromosome linear CDS188669 201 - 0.263682
rpmJ BG0511 ribosomal protein L36RecName: Full=50S ribosomal protein L36; chromosome linear CDS509193 114 + 0.263158
rpsA BG0129 ribosomal protein S1RecName: Full=30S ribosomal protein S1; chromosome linear CDS122333 1656 - 0.31099
rpsB BG0124 ribosomal protein S2RecName: Full=30S ribosomal protein S2; chromosome linear CDS119632 789 - 0.311787
rpsC BG0496 ribosomal protein S3RecName: Full=30S ribosomal protein S3; chromosome linear CDS502028 879 + 0.316268
rpsD BG0632 ribosomal protein S4RecName: Full=30S ribosomal protein S4; chromosome linear CDS644425 627 - 0.318979
rpsE BG0507 ribosomal protein S5RecName: Full=30S ribosomal protein S5; chromosome linear CDS506618 501 + 0.363273
rpsF BG0116 ribosomal protein S6RecName: Full=30S ribosomal protein S6; chromosome linear CDS112180 420 - 0.290476
rpsG BG0387 ribosomal protein S7RecName: Full=30S ribosomal protein S7; chromosome linear CDS397254 474 - 0.318565
rpsH BG0504 ribosomal protein S8RecName: Full=30S ribosomal protein S8; chromosome linear CDS505270 399 + 0.283208
rpsI BG0339 ribosomal protein S9RecName: Full=30S ribosomal protein S9; chromosome linear CDS345172 411 - 0.321168
rpsJ BG0488 ribosomal protein S10RecName: Full=30S ribosomal protein S10; chromosome linear CDS498583 312 + 0.342949
rpsK BG0513 ribosomal protein S11RecName: Full=30S ribosomal protein S11; chromosome linear CDS509729 393 + 0.343511
rpsL BG0388 ribosomal protein S12RecName: Full=30S ribosomal protein S12; chromosome linear CDS397752 375 - 0.370667
rpsM BG0512 ribosomal protein S13RecName: Full=30S ribosomal protein S13; chromosome linear CDS509324 378 + 0.328042
rpsN BG0503 ribosomal protein S14RecName: Full=30S ribosomal protein S14 type Z; chromosome linear CDS505075 186 + 0.327957
rpsO BG0830 ribosomal protein S15RecName: Full=30S ribosomal protein S15; chromosome linear CDS850436 267 + 0.303371
rpsP BG0718 ribosomal protein S16RecName: Full=30S ribosomal protein S16; chromosome linear CDS738616 261 + 0.325671
rpsQ BG0499 ribosomal protein S17RecName: Full=30S ribosomal protein S17; chromosome linear CDS503533 255 + 0.309804
rpsR BG0114 ribosomal protein S18RecName: Full=30S ribosomal protein S18; chromosome linear CDS111414 291 - 0.298969
rpsS BG0494 ribosomal protein S19RecName: Full=30S ribosomal protein S19; chromosome linear CDS501376 279 + 0.329749
rpsT BG0236 ribosomal protein S20RecName: Full=30S ribosomal protein S20; chromosome linear CDS236918 258 - 0.306202
rpsU BG0259 ribosomal protein S21RecName: Full=30S ribosomal protein S21; chromosome linear CDS265862 210 + 0.280952
serS BG0229 seryl-tRNA synthetaseRecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome linear CDS229160 1278 - 0.313772
spoU BG0051 spoU proteinSubName: Full=SpoU protein; chromosome linear CDS48444 657 - 0.296804
tgt BG0835 tRNA-guanine transglycosylaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome linear CDS856759 1128 + 0.312943
thrZ BG0742 threonyl-tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome linear CDS759739 1749 + 0.316181
tlyA BG0518 hemolysinSubName: Full=Hemolysin; chromosome linear CDS513997 720 + 0.256944
trmD BG0721 tRNA guanine-N1 methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome linear CDS739626 720 + 0.301389
trsA BG0005 tryptophanyl-tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; chromosome linear CDS5126 1038 - 0.316956
truB BG0829 tRNA pseudouridine 55 synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome linear CDS849418 849 + 0.277974
tsf BG0123 translation elongation factor TSRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome linear CDS118796 840 - 0.309524
tuf BG0487 translation elongation factor TURecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome linear CDS497347 1185 + 0.362025
tyrS BG0369 tyrosyl-tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome linear CDS378103 1218 - 0.297209
valS BG0759 valyl-tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome linear CDS780633 2628 + 0.30137
yacO BG0527 rRNA methylaseSubName: Full=rRNA methylase; chromosome linear CDS529657 741 - 0.265857