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2024-05-08 14:20:54

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Parachlamydia sp. UWE25, UWE25

Number of genes found: 160

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Parachlamydia sp. UWE25, UWE25
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pc0700 unknown proteinchromosome CDS852774 411 - 0.343066
NA pc0252 unknown proteinchromosome CDS358326 444 - 0.324324
NA pc0706 conserved hypothetical proteinchromosome CDS857963 897 + 0.366778
NA pc0648 conserved hypothetical proteinchromosome CDS795748 501 + 0.399202
NA pc0141 conserved hypothetical proteinchromosome CDS215902 750 + 0.364
NA pc1076 conserved hypothetical proteinchromosome CDS1287158 339 - 0.386431
NA pc1226 conserved hypothetical proteinchromosome CDS1460323 1428 + 0.371148
NA pc0794 probable queuine tRNA-ribosyltransferase (guanine insertion enzyme)chromosome CDS974519 1164 - 0.400344
NA pc1829 conserved hypothetical proteinchromosome CDS2184720 471 + 0.382166
NA pc1095 conserved hypothetical proteinchromosome CDS1313892 468 + 0.397436
NA pc1442 conserved hypothetical proteinchromosome CDS1716302 354 + 0.330508
NA pc1681 hypothetical proteinchromosome CDS2018941 792 - 0.32702
NA pc1590 putative ribosomal protein L9chromosome CDS1906645 486 - 0.374486
NA pc0193 conserved hypothetical proteinchromosome CDS287256 936 + 0.416667
NA pc0159 hypothetical proteinchromosome CDS238321 1179 - 0.387617
NA pc1606 probable ribosomal protein S14chromosome CDS1921202 306 + 0.437909
NA pc1987 conserved hypothetical proteinchromosome CDS2368949 894 - 0.403803
NA pc0382 conserved hypothetical proteinchromosome CDS508114 447 - 0.371365
NA pc0920 conserved hypothetical proteinchromosome CDS1114190 312 + 0.317308
NA pc2003 unknown proteinchromosome CDS2384841 564 - 0.390071
NA pc0248 putative RNA methyl transferasechromosome CDS347735 1305 - 0.328736
NA pc0035 conserved hypothetical proteinchromosome CDS54446 300 + 0.38
NA pc0338 hypothetical proteinchromosome CDS461539 636 - 0.349057
NA pc1603 hypothetical proteinchromosome CDS1920235 330 - 0.381818
NA pc1223 unknown proteinchromosome CDS1456080 723 + 0.329184
NA pc0668 unknown proteinchromosome CDS811268 327 - 0.324159
NA pc1890 conserved hypothetical proteinchromosome CDS2252757 972 - 0.409465
NA pc0752 conserved hypothetical proteinchromosome CDS930869 1098 + 0.383424
NA pc0084 unknown proteinchromosome CDS143526 669 - 0.321375
NA pc0650 unknown proteinchromosome CDS796529 1188 - 0.3367
NA pc0761 putative translation initiation factor IF-2chromosome CDS937916 2763 - 0.388708
NA pc0951 conserved hypothetical proteinchromosome CDS1149520 1005 - 0.40796
NA pc1137 unknown proteinchromosome CDS1367579 1233 + 0.373885
NA pc0990 conserved hypothetical proteinchromosome CDS1183535 258 + 0.302326
NA pc1017 conserved hypothetical proteinchromosome CDS1209144 210 + 0.333333
NA pc0158 unknown proteinchromosome CDS236401 1791 - 0.332775
aac pc1336 putative aminoglycoside N6'-acetyltransferasechromosome CDS1593412 501 + 0.345309
alaS pc1519 probable alanyl-tRNA synthetasechromosome CDS1820003 2637 + 0.375047
argS pc0231 probable arginyl-tRNA synthetasechromosome CDS327625 1755 - 0.374359
asnS pc0346 probable asparagine-tRNA ligasechromosome CDS470251 1404 + 0.367521
aspS pc0384 probable aspartate-tRNA ligasechromosome CDS509561 1800 - 0.368333
cafA pc1317 putative ribonuclease G (axial filament protein)chromosome CDS1572846 1539 + 0.367122
ctc pc1594 putative general stress protein ctcchromosome CDS1908473 555 - 0.365766
cysS pc1235 putative cysteinyl tRNA synthetasechromosome CDS1469182 1437 - 0.355602
deaD pc1265 putative ATP-dependent RNA helicasechromosome CDS1510740 1224 - 0.373366
deaD pc1559 putative ATP-dependent RNA helicasechromosome CDS1868321 1548 - 0.391473
def pc0541 putative Peptide deformylasechromosome CDS673720 471 - 0.358811
def pc0803 putative polypeptide deformylasechromosome CDS982222 531 - 0.354049
dtd pc0356 probable D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS482872 456 + 0.355263
efp pc1529 probable translation elongation factor EF-Pchromosome CDS1833395 573 + 0.387435
efp pc0769 putative elongation factor Pchromosome CDS951347 555 + 0.351351
fmt pc0404 probable methionyl-tRNA formyltransferasechromosome CDS541335 957 + 0.3814
fusA pc0207 probable translation elongation factor EF-Gchromosome CDS301111 2088 - 0.412356
gatA pc0670 probable glutamyl-tRNA(Gln) amidotransferase chain Achromosome CDS813421 1470 - 0.380952
gatB pc0669 probable glutamyl-tRNA(Gln) amidotransferase chain Bchromosome CDS811940 1485 - 0.382492
gatC pc0671 putative glutamyl-tRNA(Gln) amidotransferase chain Cchromosome CDS814907 300 - 0.36
gltX pc0244 probable glutamate-tRNA ligase (= glutamyl-tRNA synthetase)chromosome CDS342450 1509 - 0.381047
glyS pc0693 probable glycyl-tRNA synthetasechromosome CDS843019 3054 - 0.373281
hemK pc0653 putative HemK proteinchromosome CDS799626 840 + 0.361905
hisS pc0385 probable histidine-tRNA ligasechromosome CDS511526 1275 - 0.358431
ileS pc0494 putative isoleucyl-tRNA synthetasechromosome CDS631063 3117 + 0.378248
infA pc0594 probable translation initiation factor IF-1chromosome CDS732478 270 + 0.366667
infC pc0702 probable translation initiation factor IF-3chromosome CDS855435 555 + 0.398198
ksgA pc0395 putative dimethyladenosine transferasechromosome CDS528658 771 - 0.377432
leuS pc1047 probable leucyl-tRNA synthetasechromosome CDS1244786 2538 - 0.380221
lysS pc1228 probable lysyl-tRNA synthetasechromosome CDS1462049 1590 + 0.374214
lysS pc1530 putative lysyl-tRNA synthetasechromosome CDS1834013 903 + 0.385382
map pc0546 putative methionine aminopeptidasechromosome CDS679625 897 + 0.365663
map1 pc0780 probable methionyl aminopeptidasechromosome CDS961910 888 - 0.381757
miaA pc1243 putative tRNA delta-2-isopentenylpyrophosphate transferasechromosome CDS1481691 1035 - 0.352657
miaB pc1758 probable 2-methylthioadenine synthetasechromosome CDS2101062 1353 + 0.36068
pcnB pc1308 putative Poly(A) polymerasechromosome CDS1565019 1275 + 0.369412
pcnB pc0140 putative poly A polymerasechromosome CDS214667 1239 + 0.362389
pheS pc0705 probable phenylalanine-tRNA ligase alpha chainchromosome CDS856903 1041 + 0.39097
pnp pc0643 probable polyribonucleotide nucleotidyltransferasechromosome CDS789625 2109 - 0.396396
prfA pc0652 probable translation releasing factor RF-1chromosome CDS798538 1080 + 0.376852
prfB pc1331 probable peptide chain release factor RF-2chromosome CDS1586897 981 - 0.379205
prmA pc0027 putative ribosomal protein L11 methyltransferasechromosome CDS42300 795 + 0.374843
proS pc1324 putative prolyl-tRNA synthetasechromosome CDS1580274 1524 - 0.404856
r(p)l27 pc0218 probable 50S ribosomal protein L27chromosome CDS310930 252 + 0.416667
rbfA pc0760 putative ribosome binding factor Achromosome CDS937515 396 - 0.388889
rf-2 pc0548 putative peptide chain release factor 2chromosome CDS680787 357 - 0.352941
rf-3 pc1573 probable peptide chain release factor 3chromosome CDS1888990 1602 + 0.392634
rimL pc1569 putative ribosomal-protein-serine acetyltransferasechromosome CDS1882035 573 - 0.312391
rl13 pc1757 probable large subunit ribosomal protein L13chromosome CDS2100127 432 - 0.37037
rlmB pc1792 putative rRNA methylasechromosome CDS2146661 798 - 0.390977
rlu pc1791 putative 23S rRNA pseudouridine synthasechromosome CDS2146000 660 - 0.386364
rluA pc0131 putative ribosomal large subunit pseudouridine synthase (pseudouridylate synthase), rluAchromosome CDS201101 732 - 0.356557
rluD pc0355 probable 23S RNA-specific pseudouridine synthase Dchromosome CDS481899 957 + 0.382445
rplA pc0601 probable 50S ribosomal protein L1chromosome CDS736081 711 + 0.423347
rplB pc0415 probable 50S ribosomal protein L2chromosome CDS550737 846 + 0.425532
rplC pc0412 probable 50S ribosomal protein L3chromosome CDS548952 708 + 0.413842
rplD pc0413 putative 50S ribosomal protein L4chromosome CDS549779 591 + 0.389171
rplE pc0424 probable 50S ribosomal protein L5chromosome CDS554693 558 + 0.353047
rplF pc0426 probable 50S ribosomal protein L6chromosome CDS555682 549 + 0.400729
rplJ pc0602 putative 50S ribosomal protein L10chromosome CDS736796 546 + 0.410256
rplK pc0600 probable 50S ribosomal protein L11chromosome CDS735642 429 + 0.414918
rplL pc0603 probable 50S ribosomal protein L7/L12chromosome CDS737402 390 + 0.410256
rplN pc0422 probable 50S ribosomal protein L14chromosome CDS553940 369 + 0.398374
rplO pc0429 probable 50S ribosomal protein L15chromosome CDS557166 453 + 0.373068
rplP pc0419 probable 50S ribosomal protein L3chromosome CDS552854 420 + 0.414286
rplQ pc0434 probable 50S ribosomal protein L17chromosome CDS561419 429 + 0.412587
rplR pc0427 probable 50S ribosomal protein L18chromosome CDS556247 372 + 0.419355
rplS pc0657 probable ribosomal protein L19chromosome CDS803109 408 + 0.419118
rplT pc0704 probable ribosomal protein L20chromosome CDS856404 357 + 0.414566
rplU pc0217 probable 50S ribosomal protein L21chromosome CDS310596 345 + 0.426087
rplV pc0417 probable 50S ribosomal protein L22chromosome CDS551860 336 + 0.416667
rplW pc0414 probable 50S ribosomal protein L23chromosome CDS550384 336 + 0.377976
rplX pc0423 probable 50S ribosomal protein L24chromosome CDS554329 351 + 0.390313
rpmB pc0666 putative ribosomal protein L28chromosome CDS810803 276 - 0.365942
rpmC pc0420 putative 50S ribosomal protein L29chromosome CDS553280 222 + 0.378378
rpmE pc0651 putative 50S ribosomal protein L31chromosome CDS797960 354 + 0.381356
rpmF pc1315 putative 50S ribosomal protein L32chromosome CDS1571379 222 - 0.418919
rpmG pc0817 probable 50S ribosomal protein L33chromosome CDS999677 156 - 0.314103
rpmH pc1604 probable 50S ribosomal protein L34chromosome CDS1920591 138 - 0.434783
rpmI pc0703 probable 50S ribosomal protein L35chromosome CDS856040 195 + 0.461538
rpmJ pc1605 probable 50S ribosomal protein L36chromosome CDS1921054 138 + 0.405797
rpsA pc0764 probable ribosomal protein S1chromosome CDS942321 1764 - 0.363379
rpsB pc0136 probable 30S ribosomal protein S2chromosome CDS209069 819 + 0.343101
rpsC pc0418 probable 30S ribosomal protein S3chromosome CDS552207 645 + 0.421705
rpsD pc1367 probable 30S ribosomal protein S4chromosome CDS1637036 621 + 0.404187
rpsE pc0428 probable 30S ribosomal protein S5chromosome CDS556654 504 + 0.410714
rpsF pc1592 putative ribosomal protein S6 (BS9)chromosome CDS1907426 345 - 0.376812
rpsG pc0208 probable 30S ribosomal protein S7chromosome CDS303211 474 - 0.409283
rpsH pc0425 probable 30S ribosomal protein S8chromosome CDS555265 402 + 0.425373
rpsI pc1756 probable small subunit ribosomalchromosome CDS2099720 390 - 0.387179
rpsK pc0432 probable 30S ribosomal protein S11chromosome CDS559735 408 + 0.426471
rpsM pc0431 probable 30S ribosomal protein S13chromosome CDS559348 369 + 0.365854
rpsO pc0644 probable 30S ribosomal protein S15chromosome CDS792333 270 - 0.377778
rpsP pc0655 putative 30S ribosomal protein S16chromosome CDS802022 321 + 0.380062
rpsQ pc0421 probable 30S ribosomal protein S17chromosome CDS553504 246 + 0.378049
rpsR pc1591 probable ribosomal protein S18chromosome CDS1907154 261 - 0.383142
rpsS pc0416 probable 30S ribosomal protein S19chromosome CDS551585 264 + 0.386364
rpsT pc0132 putative 30S ribosomal protein S20chromosome CDS202481 291 + 0.381443
rpsU pc0467 probable 30S ribosomal protein S21chromosome CDS600695 180 + 0.344444
rrf pc1876 putative ribosome recycling factor (ribosome releasing factor)chromosome CDS2236436 552 - 0.346014
rs10 pc0206 probable 30S ribosomal protein S10chromosome CDS300758 336 - 0.419643
rs12 pc0209 probable 30S ribosomal protein S12chromosome CDS303851 381 - 0.459318
rsmB pc0397 putative 16S rRNA m5C967 SAM-dependent methyltransferasechromosome CDS530661 1134 - 0.365079
rumA pc1998 putative 23S rRNA (Uracil-5-)-methyltransferasechromosome CDS2380126 1152 + 0.367188
serS pc1488 probable seryl-tRNA synthetasechromosome CDS1770840 1362 + 0.35536
spoVc pc1593 putative peptidyl-tRNA hydrolasechromosome CDS1907781 597 - 0.338358
thrS pc0701 putative threonine-tRNA ligasechromosome CDS853772 1662 + 0.350181
thrS pc2015 probable threonine-tRNA ligasechromosome CDS2393020 1953 - 0.363543
trmD pc0656 probable tRNA (guanine N-1)-methyltransferasechromosome CDS802349 669 + 0.412556
trmH pc0450 putative tRNA (Guanosine-2'-O-)-methyltransferasechromosome CDS578222 741 - 0.338731
trpS pc0170 putative tryptophanyl-tRNA synthetase (=tryptophan-tRNA ligase)chromosome CDS249341 1062 + 0.384181
truA pc0328 putative tRNA pseudouridylate synthase Ichromosome CDS448130 771 + 0.359274
truA pc0682 putative tRNA-pseudouridine synthase Ichromosome CDS830587 789 - 0.362484
truB pc0759 probable tRNA pseudouridine synthase Bchromosome CDS936827 789 - 0.387833
tsf pc0137 putative elongation factor Ts (EF-Ts)chromosome CDS209763 975 + 0.36
tufA pc0595 probable translation elongation factor Tu (EF-Tu)chromosome CDS732977 1185 + 0.436287
tyrS pc1169 probable tyrosine-tRNA ligasechromosome CDS1396901 1278 - 0.3482
valS pc1654 probable valyl-tRNA synthetasechromosome CDS1986552 2850 + 0.381404
yabJ pc1534 probable yabJchromosome CDS1837384 390 + 0.346154
ycfB pc1800 probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase/ Antisuppressorchromosome CDS2152728 1131 + 0.401415
ygcA pc1544 putative rRNA methyltransfersechromosome CDS1849503 1329 - 0.374718
yjbC pc0160 putative ribosomal large chain pseudouridine synthase Bchromosome CDS239506 705 - 0.343262
yohI pc1579 putative protein involved in tRNA-dihydrouridine synthesischromosome CDS1895503 981 - 0.379205
yqeV pc1763 putative 2-methylthioadenine synthetasechromosome CDS2108901 1305 - 0.385441