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2024-05-07 01:36:39

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Burkholderia pseudomallei K96243, K96243

Number of genes found: 206

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Burkholderia pseudomallei K96243, K96243
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BPSL2472 putative prolin-rich exported proteinchromosome 1 CDS2979995 2574 + 0.746309
NA BPSL2144 putative RNA methylase proteinchromosome 1 CDS2574492 789 - 0.712294
NA BPSL0613 conserved hypothetical proteinchromosome 1 CDS694181 975 - 0.664615
NA BPSL0075a 50S ribosomal protein L34chromosome 1 CDS87398 135 + 0.659259
NA BPSL2821 putative polynucleotide adenylyltransferasechromosome 1 CDS3372727 1548 + 0.700258
NA BPSL0895 putative pseudouridine synthasechromosome 1 CDS1043345 579 - 0.732297
NA BPSS1517 hypothetical proteinchromosome 2 CDS2070325 444 - 0.495495
NA BPSS1459 putative acetyltransferase proteinchromosome 2 CDS1990568 783 - 0.701149
NA BPSS0994 hypothetical proteinchromosome 2 CDS1312677 1470 - 0.706803
NA BPSL2260 putative tryptophanyl-tRNA synthetasechromosome 1 CDS2725214 1203 - 0.659185
NA BPSL0520 ribosomal L25p family proteinchromosome 1 CDS573346 627 - 0.639553
NA BPSS0911 putative amidasechromosome 2 CDS1204825 1494 + 0.690094
NA BPSL2570 hypothetical proteinchromosome 1 CDS3098811 558 - 0.578853
NA BPSL1713 putative acetyltransferasechromosome 1 CDS2017441 573 - 0.678883
NA BPSS0157 hypothetical proteinchromosome 2 CDS205043 420 + 0.62619
NA BPSL2123 putative deaminasechromosome 1 CDS2550188 525 - 0.744762
NA BPSS1611 conserved hypothetical proteinchromosome 2 CDS2188230 456 - 0.625
NA BPSL2262 conserved hypothetical proteinchromosome 1 CDS2727189 630 - 0.695238
NA BPSL2536 putative amidotransferasechromosome 1 CDS3058425 1377 + 0.740015
NA BPSL0909 NOL1/NOP2/Sun family proteinchromosome 1 CDS1061050 1263 + 0.707838
NA BPSL1508 putative 23S rRNA (uracil-5-)-methyltransferasechromosome 1 CDS1746174 1398 + 0.671674
NA BPSL1947 conserved hypothetical proteinchromosome 1 CDS2319386 354 - 0.661017
NA BPSL3062 putative GTP-binding proteinchromosome 1 CDS3652194 1095 + 0.650228
NA BPSS0909 OmpA family proteinchromosome 2 CDS1202875 831 + 0.672684
NA BPSL1852 conserved hypothetical proteinchromosome 1 CDS2206826 1020 + 0.655882
NA BPSL0449 SpoU rRNA methylase family proteinchromosome 1 CDS488218 471 - 0.687898
NA BPSL1917 putative ribosome-binding factorchromosome 1 CDS2284880 369 - 0.607046
NA BPSS2128 putative indole acetamide hydrolasechromosome 2 CDS2879391 1404 + 0.731481
NA BPSL2187 putative ATP-dependent RNA helicasechromosome 1 CDS2624724 1551 + 0.724694
NA BPSL0762 putative RNA 2'-phosphotransferasechromosome 1 CDS877250 555 + 0.571171
NA BPSS0810 conserved hypothetical proteinchromosome 2 CDS1085445 624 + 0.695513
NA BPSS2222 hypothetical proteinchromosome 2 CDS2996319 678 - 0.696165
NA BPSL2162 conserved pseudouridylate synthase-related proteinchromosome 1 CDS2595237 750 + 0.689333
NA BPSS1659 hypothetical proteinchromosome 2 CDS2280838 288 + 0.652778
NA BPSL1659 putative exported proteinchromosome 1 CDS1922210 900 + 0.597778
NA BPSL1354 conserved hypothetical proteinchromosome 1 CDS1581618 555 - 0.713513
NA BPSS0820 putative tRNA synthetasechromosome 2 CDS1104095 2205 + 0.733787
NA BPSL0384 conserved hypothetical proteinchromosome 1 CDS416139 324 + 0.645062
NA BPSL1491 50S ribosomal protein L31chromosome 1 CDS1729638 264 - 0.564394
NA BPSL2332 hypothetical proteinchromosome 1 CDS2819230 873 - 0.507446
NA BPSS0627 putative ribonucleasechromosome 2 CDS856170 723 + 0.64592
NA BPSL1115 putative glutamyl tRNA synthetasechromosome 1 CDS1293310 894 - 0.741611
NA BPSL0532 putatve PTS system, EIIa componentchromosome 1 CDS584514 360 - 0.577778
NA BPSL2422 putative elongation factor pchromosome 1 CDS2927947 558 + 0.59319
NA BPSS1387 conserved hypothetical proteinchromosome 2 CDS1899336 486 - 0.596708
NA BPSS0213 conserved hypothetical proteinchromosome 2 CDS287105 591 + 0.658206
NA BPSS2201 conserved hypothetical proteinchromosome 2 CDS2968811 393 + 0.727735
NA BPSL1183 putative glutamyl-tRNA amidotransferasechromosome 1 CDS1365426 1395 + 0.73405
NA BPSL3156 conserved hypothetical proteinchromosome 1 CDS3755758 555 - 0.76036
NA BPSL2163 putative deformylasechromosome 1 CDS2596181 534 - 0.666667
NA BPSL0656 putative nucleotidyl transferasechromosome 1 CDS745363 720 - 0.731944
NA BPSL1355 putative ribosomal RNA large subunit methyltransferasechromosome 1 CDS1582366 663 + 0.621418
NA BPSS1915 putative metallo-beta-lactamase family proteinchromosome 2 CDS2595091 1380 + 0.686957
NA BPSS1408 hypothetical proteinchromosome 2 CDS1921937 249 + 0.646586
NA BPSL2249 putative tRNA/rRNA methyltransferase proteinchromosome 1 CDS2711247 912 - 0.712719
NA BPSL1873 putative tRNA/rRNA methyltransferasechromosome 1 CDS2226546 744 - 0.701613
NA BPSL0930 putative ribosomal small subunit pseudouridine synthase Achromosome 1 CDS1082519 723 - 0.694329
NA BPSS2307 putative amidasechromosome 2 CDS3108024 1587 - 0.748582
NA BPSL1285 putative release factorchromosome 1 CDS1496856 405 + 0.683951
NA BPSL1532 putative ribosomal large subunit pseudouridine synthase Dchromosome 1 CDS1774462 1188 + 0.707071
NA BPSS1608 conserved hypothetical proteinchromosome 2 CDS2184499 663 - 0.695324
NA BPSL3086 conserved hypothetical proteinchromosome 1 CDS3681187 1191 - 0.719563
NA BPSL1880 putative acetyltransferasechromosome 1 CDS2239082 525 - 0.708571
NA BPSL0685 conserved hypothetical proteinchromosome 1 CDS780710 423 - 0.626478
NA BPSS1984 hypothetical proteinchromosome 2 CDS2683006 2907 + 0.674235
NA BPSL1538 conserved hypothetical proteinchromosome 1 CDS1782265 1380 + 0.665217
NA BPSL2452 putative ribonuclease Echromosome 1 CDS2955743 3267 + 0.715641
NA BPSL2350 putative alkane monooxygenasechromosome 1 CDS2842000 1167 + 0.671808
NA BPSS2059 conserved hypothetical proteinchromosome 2 CDS2793355 411 - 0.591241
NA BPSL3287 putative amidasechromosome 1 CDS3903233 1491 + 0.724346
NA BPSL0631 YjgF family proteinchromosome 1 CDS714577 387 + 0.658915
NA BPSL1921 conserved hypothetical proteinchromosome 1 CDS2290611 1665 - 0.735736
NA BPSL1082 conserved hypothetical proteinchromosome 1 CDS1253042 468 - 0.649573
NA BPSL2894 putative nitrogen regulation-related proteinchromosome 1 CDS3464124 1065 + 0.676995
NA BPSL0802 conserved hypothetical proteinchromosome 1 CDS930139 1026 + 0.739766
NA BPSL2172 putative DNA methylasechromosome 1 CDS2609169 924 + 0.693723
NA BPSS1676 conserved hypothetical proteinchromosome 2 CDS2302418 1023 - 0.69306
NA BPSS1179 hypothetical proteinchromosome 2 CDS1587668 444 + 0.653153
NA BPSL1722 putative formyl transferasechromosome 1 CDS2028624 819 - 0.619048
alaS BPSL2009 alanyl-tRNA synthetasechromosome 1 CDS2395633 2625 - 0.68381
ansA BPSS2060 L-asparaginasechromosome 2 CDS2793880 1056 - 0.595644
ansB BPSL1448 L-asparaginase II precursorchromosome 1 CDS1683714 1044 + 0.720307
argS BPSL0383 putative arginyl-tRNA synthetasechromosome 1 CDS414152 1785 - 0.682913
aspS BPSL0644 aspartyl-tRNA synthetasechromosome 1 CDS729466 1797 + 0.662771
bipC BPSS1531 putative cell invasion proteinchromosome 2 CDS2084259 1260 - 0.715873
cafA BPSL1158 ribonuclease Gchromosome 1 CDS1337638 1467 - 0.65576
cca BPSL0265 tRNA nucleotidyltransferasechromosome 1 CDS277201 1242 + 0.724638
cysS BPSL2243 cysteinyl-tRNA synthetasechromosome 1 CDS2705558 1398 - 0.65236
dbpA BPSS0145 ATP-independent RNA helicasechromosome 2 CDS190115 1398 - 0.688841
def BPSL0121 peptide deformylasechromosome 1 CDS136513 504 + 0.617063
dtd BPSL2903 D-tyrosyl-tRNAchromosome 1 CDS3472953 480 - 0.725
fmt BPSL0122 methionyl-tRNA formyltransferasechromosome 1 CDS137048 984 + 0.726626
frr BPSL2156 ribosome recycling factorchromosome 1 CDS2586860 561 - 0.631016
fusA BPSL3216 elongation factor Gchromosome 1 CDS3810679 2103 - 0.619591
fusA BPSL0893 elongation factor Gchromosome 1 CDS1039748 2115 - 0.650118
gatA BPSL0188 glutamyl-tRNA amidotransferase subunit Achromosome 1 CDS193633 1491 + 0.701543
gatB BPSL0189 glutamyl-tRNA amidotransferase subunit Bchromosome 1 CDS195126 1473 + 0.655126
gatC BPSL0187 glutamyl-tRNA amidotransferase subunit Cchromosome 1 CDS193227 294 + 0.676871
glnS BPSL2012 glutaminyl-tRNA synthetasechromosome 1 CDS2400830 1710 + 0.649123
gltX BPSL2197 glutamyl-tRNA synthetasechromosome 1 CDS2637135 1410 - 0.670213
glyQ BPSL0668 Probable glycyl-tRNA synthetase alpha chainchromosome 1 CDS759664 1008 - 0.660714
glyS BPSL0667 putative glycyl-tRNA synthetase beta chainchromosome 1 CDS757548 2100 - 0.699048
gshB BPSL0437 glutathione synthetasechromosome 1 CDS477068 957 + 0.684431
hemK BPSL3074 protein methyltransferase HemKchromosome 1 CDS3668207 858 + 0.734266
hisS BPSL1514 histidyl-tRNA synthetasechromosome 1 CDS1752838 1341 + 0.65921
hslR BPSL2830 putative heat shock protein 15chromosome 1 CDS3383618 408 - 0.693627
ileS1 BPSL0906 isoleucyl-tRNA synthetasechromosome 1 CDS1056325 2838 - 0.666667
ileS2 BPSS1315 putative isoleucyl-tRNA synthetasechromosome 2 CDS1800598 2904 - 0.71832
infA BPSL3192 translation initiation factor IF-1chromosome 1 CDS3798026 219 - 0.534247
infA BPSL1062 translation initiation factor IF-1chromosome 1 CDS1228340 267 + 0.59176
infB BPSL1918 translation initiation factor IF-2chromosome 1 CDS2285354 2928 - 0.682036
infC BPSL1944 translation initiation factor IF-3chromosome 1 CDS2314163 537 - 0.571695
ksgA BPSL0661 dimethyladenosine transferasechromosome 1 CDS752212 828 + 0.677536
leuS BPSL2938 leucyl-tRNA synthetasechromosome 1 CDS3508297 2595 - 0.665511
lysS BPSL2281 lysyl-tRNA synthetasechromosome 1 CDS2749035 1527 + 0.660118
map BPSL2160 methionine aminopeptidasechromosome 1 CDS2590690 816 + 0.651961
map2 BPSL2212 methionine aminopeptidase 2chromosome 1 CDS2655361 819 - 0.69475
miaA BPSL2815 putative tRNA delta(2)-isopentenylpyrophosphate transferasechromosome 1 CDS3366949 975 + 0.734359
miaB BPSL0674 putative tRNA thiotransferase protein MiaBchromosome 1 CDS767263 1374 - 0.652838
omlA BPSL2942 putative outer membrane proteinchromosome 1 CDS3513232 825 - 0.722424
pheS BPSL1941 phenylalanyl-tRNA synthetase alpha chainchromosome 1 CDS2312221 1014 - 0.640039
pnp BPSL1207 polyribonucleotide nucleotidyltransferasechromosome 1 CDS1391849 2142 + 0.65873
prfA BPSL3073 peptide chain release factor 1chromosome 1 CDS3667081 1083 + 0.674977
prmA BPSL2985 ribosomal protein L11 methyltransferasechromosome 1 CDS3558414 903 + 0.688815
proS BPSL2998 prolyl-tRNA synthetasechromosome 1 CDS3573930 1737 - 0.66494
pth BPSL0519 peptidyl-tRNA hydrolasechromosome 1 CDS572627 606 - 0.674918
queA BPSL2868 putative queuosine S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome 1 CDS3432038 1083 + 0.715605
relC BPSL3225 50s ribosomal protein L11chromosome 1 CDS3826850 432 - 0.618056
rfbF BPSS0419 glucose-1-phosphate cytidylyltransferase (O-antigen-related)chromosome 2 CDS579626 777 + 0.622909
rhlE1 BPSL0695 putative ATP-dependent RNA helicase 1chromosome 1 CDS791664 1458 - 0.69273
rhlE2 BPSL1114 putative ATP-dependent RNA helicase 2chromosome 1 CDS1291364 1449 + 0.689441
rimM BPSL2491 16S rRNA processing proteinchromosome 1 CDS3004440 636 - 0.683962
rluC BPSL2451 ribosomal large subunit pseudouridine synthase Cchromosome 1 CDS2954013 1008 - 0.678571
rnc BPSL2429 ribonuclease IIIchromosome 1 CDS2934365 1404 - 0.674501
rnpA BPSL0076 ribonuclease P protein componentchromosome 1 CDS87606 411 + 0.683698
rph BPSL2565 ribonuclease PHchromosome 1 CDS3094558 732 + 0.703552
rplA BPSL3224 50S ribosomal protein L1chromosome 1 CDS3826151 699 - 0.65236
rplB BPSL3210 50S ribosomal protein L2chromosome 1 CDS3806375 828 - 0.663043
rplC BPSL3213 50S ribosomal protein L3chromosome 1 CDS3808136 660 - 0.630303
rplD BPSL3212 50S ribosomal protein L4chromosome 1 CDS3807516 621 - 0.610306
rplE BPSL3201 50S ribosomal protein L5chromosome 1 CDS3802490 540 - 0.587037
rplF BPSL3198 50S ribosomal protein L6chromosome 1 CDS3801216 531 - 0.623352
rplI BPSL1461 50S ribosomal protein L9chromosome 1 CDS1695759 453 + 0.631347
rplJ BPSL3223 50S ribosomal protein L10chromosome 1 CDS3825356 498 - 0.606426
rplL BPSL3222 50S ribosomal protein L7/L12chromosome 1 CDS3824918 333 - 0.615616
rplM BPSL2911 50S ribosomal protein L13chromosome 1 CDS3479748 429 - 0.599068
rplN BPSL3203 50S ribosomal protein L14chromosome 1 CDS3803365 369 - 0.590786
rplO BPSL3194 50S ribosomal protein L15chromosome 1 CDS3799645 435 - 0.641379
rplP BPSL3206 50S ribosomal protein L16chromosome 1 CDS3804516 417 - 0.611511
rplQ BPSL3186 50S ribosomal protein L17chromosome 1 CDS3794645 396 - 0.626263
rplR BPSL3197 50S ribosomal protein L18chromosome 1 CDS3800838 366 - 0.655738
rplS BPSL2489 50S ribosomal protein L19chromosome 1 CDS3003117 390 - 0.620513
rplT BPSL1942 50S ribosomal protein L20chromosome 1 CDS2313383 360 - 0.605556
rplU BPSL3005 50S ribosomal protein L21chromosome 1 CDS3581781 312 - 0.560897
rplV BPSL3208 50S ribosomal protein L22chromosome 1 CDS3805747 330 - 0.593939
rplW BPSL3211 50S ribosomal protein L23chromosome 1 CDS3807205 315 - 0.561905
rplX BPSL3202 50S ribosomal protein L24chromosome 1 CDS3803047 309 - 0.598706
rpm BPSL3205 50S ribosomal protein L29chromosome 1 CDS3804312 195 - 0.579487
rpmA BPSL3004 50S ribosomal protein L27chromosome 1 CDS3581489 264 - 0.655303
rpmB BPSL0916 50S ribosomal protein L28chromosome 1 CDS1069402 234 - 0.606838
rpmD BPSL3195 50S ribosomal protein L30chromosome 1 CDS3800108 183 - 0.601093
rpmF BPSL2444 50S ribosomal protein L32chromosome 1 CDS2949388 180 - 0.577778
rpmG BPSL0915 50S ribosomal protein L33chromosome 1 CDS1069217 168 - 0.535714
rpmI BPSL1943 50S ribosomal protein L35chromosome 1 CDS2313773 198 - 0.59596
rpmJ BPSL3191 50S ribosomal protein L36chromosome 1 CDS3797889 117 - 0.547009
rpsA BPSL2515 30S ribosomal protein S1chromosome 1 CDS3028413 1713 - 0.619965
rpsB BPSL2159 30S ribosomal protein S2chromosome 1 CDS2589467 741 - 0.619433
rpsC BPSL3207 30S ribosomal protein S3chromosome 1 CDS3804935 801 - 0.630462
rpsD BPSL3188 30S ribosomal protein S4chromosome 1 CDS3796286 624 - 0.626603
rpsE BPSL3196 30S ribosomal protein S5chromosome 1 CDS3800306 519 - 0.645472
rpsF BPSL1458 putative 30S ribosomal protein S6chromosome 1 CDS1694743 375 + 0.594667
rpsG BPSL3217 30S ribosomal protein S7chromosome 1 CDS3812903 471 - 0.600849
rpsH BPSL3199 30S ribosomal protein S8chromosome 1 CDS3801767 396 - 0.623737
rpsI BPSL2910 30S ribosomal protein S9chromosome 1 CDS3479344 393 - 0.633588
rpsJ BPSL3214 30s ribosomal protein S10chromosome 1 CDS3808983 312 - 0.61859
rpsK BPSL3189 30S ribosomal protein S11chromosome 1 CDS3797060 402 - 0.651741
rpsL BPSL3218 30S ribosomal protein S12chromosome 1 CDS3813544 381 - 0.616798
rpsM BPSL3190 30S ribosomal protein S13chromosome 1 CDS3797485 366 - 0.617486
rpsN BPSL3200 30S ribosomal protein S14chromosome 1 CDS3802177 306 - 0.614379
rpsO BPSL1206 30S ribosomal protein S15chromosome 1 CDS1391276 270 + 0.625926
rpsP BPSL2492 30S ribosomal protein S16chromosome 1 CDS3005174 255 - 0.639216
rpsQ BPSL3204 30S ribosomal protein S17chromosome 1 CDS3804043 273 - 0.578755
rpsR BPSL1460 30S ribosomal protein S18chromosome 1 CDS1695456 276 + 0.601449
rpsS BPSL3209 30S ribosomal protein S19chromosome 1 CDS3806089 276 - 0.565217
rpsT BPSL0871 putative 30S ribosomal protein S20chromosome 1 CDS1011098 279 - 0.634409
rpsU BPSS1364a 30S ribosomal protein S21chromosome 2 CDS1867543 213 + 0.596244
rpsU BPSS1758 30S ribosomal protein S21chromosome 2 CDS2411951 213 - 0.591549
rpsU BPSL3318 30S ribosomal protein S21chromosome 1 CDS3936905 213 - 0.624413
selB BPSS1662 selenocysteine-specific elongation factorchromosome 2 CDS2282552 1926 - 0.727934
serS BPSL2600 seryl-tRNA synthetasechromosome 1 CDS3119313 1302 - 0.675115
speG BPSL0096 spermidine n(1)-acetyltransferasechromosome 1 CDS107334 561 + 0.57041
sun BPSL0125 NOL1/NOP2/Sun family proteinchromosome 1 CDS140228 1410 + 0.724113
supK BPSL2280 peptide chain release factor 2chromosome 1 CDS2747838 1105 + 0.639819
tgt BPSL2869 putative queuine tRNA-ribosyltransferasechromosome 1 CDS3433421 1194 + 0.665829
thrS BPSL1945 threonyl-tRNA synthetasechromosome 1 CDS2314737 1908 - 0.622642
trmD BPSL2490 tRNA(guanine-n(1)-)-methyltransferasechromosome 1 CDS3003644 795 - 0.675472
trmU BPSL2889 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome 1 CDS3456922 1152 + 0.686632
trpS BPSS1865 tryptophanyl-tRNA synthetasechromosome 2 CDS2533352 1041 + 0.683958
truA BPSS1701 tRNA pseudouridine synthase Achromosome 2 CDS2335282 816 - 0.677696
truB BPSL1916 tRNA pseudouridine synthase Bchromosome 1 CDS2283918 936 - 0.71047
tsf BPSL2158 elongation factor TSchromosome 1 CDS2588403 882 - 0.651927
tufA1 BPSL3228 elongation factor Tuchromosome 1 CDS3828544 1191 - 0.630563
tufA2 BPSL3215 elongation factor Tuchromosome 1 CDS3809447 1191 - 0.629723
tyrZ BPSL2904 tyrosyl-tRNA synthetasechromosome 1 CDS3473503 1242 - 0.648148
valS BPSL1980 putative valyl-tRNA synthetasechromosome 1 CDS2359584 2868 + 0.662134
wcbM BPSL2794 putative D-glycero-d-manno-heptose 1-phosphate guanosyltransferasechromosome 1 CDS3341474 693 - 0.591631