TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-08 02:18:40

Gene list

Applied filters:

COG category: Translation, ribosomal structure and biogenesis
Organism: Synechococcus sp. WH 8102, WH8102

Number of genes found: 154

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus sp. WH 8102, WH8102
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SYNW0247 conserved hypothetical proteinchromosome CDS248585 369 + 0.571816
NA SYNW1029 possible tRNA/rRNA methyltransferasechromosome CDS1024755 1443 + 0.659737
NA SYNW2254 Poly A polymerase familychromosome CDS2152369 1191 + 0.662468
NA SYNW2386 conserved hypothetical proteinchromosome CDS2293524 444 - 0.657658
NA SYNW2288 probable pseudouridine synthasechromosome CDS2182853 948 - 0.633966
NA SYNW0899 probable glucose inhibited division proteinchromosome CDS861278 1386 + 0.62482
NA SYNW1103 conserved hypothetical proteinchromosome CDS1096144 1011 + 0.585559
NA SYNW1228 conserved hypothetical proteinchromosome CDS1219970 1398 - 0.61731
NA SYNW0704 probable GTP-binding proteinchromosome CDS689632 1092 + 0.565018
NA SYNW1937 similar to tRNA-(MS[2]IO[6]A)-hydroxylasechromosome CDS1841991 636 - 0.553459
NA SYNW0598 possible N-terminal part of IF-2chromosome CDS580446 1491 - 0.690812
NA SYNW0588 glutamyl-tRNA synthetase homologchromosome CDS569940 882 + 0.662132
NA SYNW0920 probable ATP-dependent RNA helicase DeaDchromosome CDS880771 1797 + 0.629939
NA SYNW1076 cytidine/deoxycytidylate deaminase family proteinchromosome CDS1064070 474 - 0.64135
NA SYNW0482 hemolysin-like proteinchromosome CDS483260 816 + 0.669118
NA SYNW1975 conserved hypothetical proteinchromosome CDS1884408 606 - 0.650165
NA SYNW2266 Putative sugar-phosphate nucleotidyl transferasechromosome CDS2164514 1194 + 0.569514
NA SYNW1432 hypotheticalchromosome CDS1400494 288 + 0.579861
NA SYNW1052 putative rRNA (adenine-N6,N6)-dimethyltransferasechromosome CDS1043549 909 + 0.625963
NA SYNW0188 possible polyA polymerasechromosome CDS187376 1212 + 0.676568
NA SYNW0655 putative nitrogen regulation protein NifR3 family homologchromosome CDS640927 1002 - 0.672655
NA SYNW0228 conserved hypotheticalchromosome CDS227493 699 + 0.633763
NA SYNW2207 possible Ribosome-binding factor Achromosome CDS2103198 405 + 0.62716
NA SYNW1622 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS1561290 1191 + 0.6356
NA SYNW2194 possible Fe-S oxidoreductasechromosome CDS2092534 1395 + 0.645161
NA SYNW0977 conserved hypothetical proteinchromosome CDS968928 306 + 0.598039
NA SYNW0682 N2,N2-dimethylguanosine tRNA methyltransferase-like proteinchromosome CDS666609 1176 + 0.657313
NA SYNW1545 putative translation initiation inhibitorchromosome CDS1488334 408 + 0.637255
NA SYNW0015 Uncharacterized protein family UPF0034chromosome CDS17529 993 - 0.628399
NA SYNW2282 conserved hypothetical proteinchromosome CDS2178362 324 + 0.62963
NA SYNW2420 conserved hypothetical proteinchromosome CDS2324868 435 - 0.645977
NA SYNW0826 hypotheticalchromosome CDS797536 438 + 0.486301
NA SYNW1215 putative tRNA/rRNA methyltransferase (SpoU family)chromosome CDS1206412 501 - 0.600798
NA SYNW0685 possible pseudouridine synthasechromosome CDS669941 678 - 0.653392
NA SYNW1679 Sun protein (Fmu protein)chromosome CDS1615831 1326 - 0.653846
NA SYNW0719 probable tRNA/rRNA methyltransferasechromosome CDS703906 717 - 0.644351
NA SYNW2303 conserved hypothetical proteinchromosome CDS2197435 6045 - 0.484864
NA SYNW1514 conserved hypothetical proteinchromosome CDS1461618 516 - 0.575581
NA SYNW1317 predicted exonuclease involved in mRNA processing (COG1782)chromosome CDS1312423 987 + 0.639311
NA SYNW1681 putative tRNA (guanosine-2'-O-)-methyltransferasechromosome CDS1617506 690 + 0.610145
NA SYNW0797 conserved hypothetical proteinchromosome CDS774347 618 - 0.616505
alaS,lovB SYNW2360 Alanyl-tRNA synthetasechromosome CDS2264836 2670 - 0.642322
argS SYNW2319 arginyl-tRNA synthetasechromosome CDS2219394 1794 - 0.641583
aspS SYNW2426 Aspartyl-tRNA synthetase:GAD domain:tRNA synthetases, class I.chromosome CDS2329049 1833 + 0.642662
cysRS SYNW0701 cysteinyl-tRNA synthetasechromosome CDS683915 1482 - 0.622132
def SYNW0324 putative formylmethionine deformylasechromosome CDS321992 606 + 0.59901
eIF2B SYNW1962 putative translation initiation factor eIF-2B alpha subunitchromosome CDS1868203 1083 - 0.650046
efp SYNW0033 Translation elongation factor EF-Pchromosome CDS33466 564 + 0.590426
fmt SYNW1195 putative methionyl-tRNA formyltransferasechromosome CDS1185151 1017 - 0.614553
fusA SYNW2137 elongation factor EF-Gchromosome CDS2026756 2073 + 0.589966
gatA SYNW1031 glutamyl-tRNA (Gln) amidotransferase subunit Achromosome CDS1026544 1461 + 0.625599
gatB SYNW2356 glutamyl-tRNA (Gln) amidotransferase subunit Bchromosome CDS2259657 1476 - 0.583333
gatC SYNW0292 glutamyl-tRNA (Gln) amidotransferase subunit Cchromosome CDS292355 294 - 0.591837
gltX SYNW1826 glutamyl-tRNA synthetasechromosome CDS1746399 1434 + 0.61855
glyQ,glyS(a) SYNW1671 glycyl-tRNA synthetase alpha subunitchromosome CDS1608981 891 - 0.630752
glyS SYNW1096 putative Glycyl-tRNA synthetase, beta subunitchromosome CDS1084160 2163 + 0.616736
gshB SYNW2309 putative glutathione synthetasechromosome CDS2212355 924 - 0.645022
hemK SYNW1976 possible protoporphyrinogen oxidasechromosome CDS1885010 891 - 0.62963
hisS,hisS1 SYNW0197 histidyl-tRNA synthetasechromosome CDS201636 1293 + 0.658159
hli8 SYNW1833 possible high light inducible proteinchromosome CDS1752259 180 - 0.588889
ileS SYNW0289 isoleucyl-tRNA synthetasechromosome CDS287684 2925 - 0.635897
infA SYNW0686 translation initiation factor IF-1chromosome CDS670786 270 + 0.611111
infB SYNW0597 translation initiation factor IF-2chromosome CDS578455 1953 - 0.6298
infC SYNW0093 translation initiation factor IF-3chromosome CDS94384 654 - 0.61315
leuS SYNW1255 leucyl-tRNA synthetasechromosome CDS1249942 2574 + 0.60373
lrtA SYNW0667 light repressed protein A homologchromosome CDS651190 588 - 0.642857
lysS SYNW0127 lysyl-tRNA synthetasechromosome CDS124707 1509 + 0.628231
map SYNW1822 putative methionine aminopeptidasechromosome CDS1744068 840 - 0.586905
metG SYNW1222 putative methionyl-tRNA synthetasechromosome CDS1211549 1545 - 0.612298
miaA,trpX SYNW0094 tRNA delta-2-isopentenylpyrophosphate (IPP) transferasechromosome CDS95094 900 - 0.64
miaB SYNW1640 2-methylthioadenine synthetasechromosome CDS1577840 1383 + 0.611714
pheS SYNW1600 Phenylalanyl-tRNA synthetasechromosome CDS1541706 1008 - 0.630952
pnp SYNW1897 polyribonucleotide nucleotidyltransferasechromosome CDS1808511 2166 + 0.626962
prfA,sueB SYNW2096 peptide chain release factor RF-1chromosome CDS1979171 1098 + 0.628415
prfB SYNW2311 peptide chain release factor RF-2chromosome CDS2213618 1126 + 0.620782
prfC SYNW1149 peptide-chain-release factor RF-3chromosome CDS1144777 1644 + 0.604623
prmA SYNW0534 putative methyltransferase for Ribosomal protein L11chromosome CDS527927 870 + 0.693103
proS,drpA SYNW1771 Prolyl-tRNA synthetasechromosome CDS1700705 1782 + 0.619529
pth SYNW0271 putative peptidyl-tRNA hydrolase (PTH)chromosome CDS271836 612 + 0.625817
queA SYNW0672 Queuosine biosynthesis proteinchromosome CDS656331 1101 + 0.632153
rimK SYNW1384 possible ribosomal protein S6 modification proteinchromosome CDS1363730 1401 - 0.584582
rimM SYNW0149 possible 16S rRNA processing protein RimMchromosome CDS145103 534 - 0.625468
rluA SYNW0737 putative pseudouridylate synthasechromosome CDS718910 642 + 0.601246
rluD SYNW2326 putative pseudouridylate synthase specific to ribosomal large subunitchromosome CDS2229752 996 - 0.62249
rnd SYNW2036 putative ribonuclease Dchromosome CDS1932487 645 - 0.626357
rne SYNW2145 ribonuclease Echromosome CDS2034141 1992 - 0.633032
rph SYNW0276 ribonuclease PHchromosome CDS275071 750 - 0.650667
rpl1, rplA SYNW2342 50S ribosomal protein L1chromosome CDS2244112 708 - 0.617232
rpl10, rplJ SYNW2341 50S ribosomal protein L10chromosome CDS2243345 528 - 0.598485
rpl11, rplK SYNW2343 50S ribosomal protein L11chromosome CDS2244891 426 - 0.591549
rpl12, rplL, rpl7 SYNW2340 50S ribosomal protein L7/L12chromosome CDS2242893 396 - 0.603535
rpl13, rplM SYNW2093 50S ribosomal protein L13chromosome CDS1978035 453 + 0.598234
rpl15, rplO SYNW2084 50S ribosomal protein L15chromosome CDS1972019 459 + 0.636166
rpl16, rplP SYNW2074 50S ribosomal protein L16chromosome CDS1967656 477 + 0.612159
rpl17, rplQ SYNW2091 50S ribosomal protein L17chromosome CDS1976613 351 + 0.652422
rpl18, rplR SYNW2082 50S ribosomal protein L18chromosome CDS1970983 369 + 0.653117
rpl19 SYNW1824 possible 50S ribosomal protein L19chromosome CDS1745275 465 + 0.602151
rpl2, rplB SYNW2070 50S ribosomal protein L2chromosome CDS1965346 864 + 0.666667
rpl20, rplT SYNW0057 50S ribosomal protein L20chromosome CDS52783 348 - 0.623563
rpl21, rplU SYNW0547 50S ribosomal protein L21chromosome CDS536993 414 - 0.591787
rpl22, rplV SYNW2072 50S ribosomal protein L22chromosome CDS1966525 366 + 0.636612
rpl23, rplW SYNW2069 50S ribosomal protein L23chromosome CDS1965028 303 + 0.633663
rpl24, rplX SYNW2078 50S ribosomal protein L24chromosome CDS1969037 357 + 0.607843
rpl27, rpmA SYNW0546 50S ribosomal protein L27chromosome CDS536682 267 - 0.610487
rpl28, rpmB SYNW1279 50S ribosomal protein L28chromosome CDS1278741 237 + 0.590717
rpl29, rpmC SYNW2075 50S ribosomal protein L29chromosome CDS1968135 210 + 0.619048
rpl3, rplC SYNW2067 50S ribosomal protein L3chromosome CDS1963744 657 + 0.625571
rpl31, rpmE SYNW2095 50S ribosomal protein L31chromosome CDS1978896 261 + 0.590038
rpl32, rpmF SYNW1210 50S ribosomal protein L32chromosome CDS1199267 177 - 0.60452
rpl33, rpmG SYNW1226 50S ribosomal protein L33chromosome CDS1217227 195 - 0.584615
rpl34, rpmH SYNW1887 50S ribosomal protein L34chromosome CDS1801191 138 + 0.702899
rpl35, rpmI SYNW0058 50S ribosomal protein L35chromosome CDS53171 198 - 0.616162
rpl4, rplD SYNW2068 50S ribosomal protein L4chromosome CDS1964400 636 + 0.650943
rpl5, rplE SYNW2079 50S ribosomal protein L5chromosome CDS1969435 540 + 0.614815
rpl6, rplF SYNW2081 50S ribosomal protein L6chromosome CDS1970410 540 + 0.609259
rpl9, rplI SYNW2378 50S ribosomal protein L9chromosome CDS2287102 459 + 0.59695
rplN,rpl14 SYNW2077 50S ribosomal protein L14chromosome CDS1968670 366 + 0.603825
rpmJ,rpl36 SYNW2087 50S ribosomal protein L36chromosome CDS1974560 114 + 0.605263
rps10, rpsJ SYNW2139 30S ribosomal protein S10chromosome CDS2030195 321 + 0.570093
rps11, rpsK SYNW2089 30S ribosomal protein S11chromosome CDS1975190 393 + 0.615776
rps12, rpsL SYNW2135 30S ribosomal protein S12chromosome CDS2025765 375 + 0.629333
rps13, rpsM SYNW2088 30S ribosomal protein S13chromosome CDS1974788 366 + 0.647541
rps14, rpsN SYNW1896 30S ribosomal protein S14chromosome CDS1808090 303 + 0.617162
rps15, rpsO SYNW1034 30S ribosomal protein S15chromosome CDS1032020 270 - 0.607407
rps16, rpsP SYNW1617 30S Ribosomal protein S16chromosome CDS1554833 423 - 0.638298
rps17, rpsQ SYNW2076 30S ribosomal protein S17chromosome CDS1968362 312 + 0.599359
rps18, rpsR SYNW1225 30S ribosomal protein S18chromosome CDS1216967 222 - 0.563063
rps19, rpsS SYNW2071 30S ribosomal protein S19chromosome CDS1966245 276 + 0.565217
rps1a, rpsA1 SYNW1985 30S ribosomal protein S1, homolog Achromosome CDS1891587 1104 + 0.608696
rps1b, rpsA2, nbp1 SYNW1740 30S ribosomal protein S1 homolog B, putative Nbp1chromosome CDS1670648 1221 + 0.628993
rps2, rpsB SYNW1090 30S ribosomal protein S2chromosome CDS1076510 720 + 0.627778
rps21, rpsU SYNW1442 30S ribosomal protein S21chromosome CDS1408581 177 + 0.576271
rps3, rpsC SYNW2073 30S ribosomal protein S3chromosome CDS1966911 729 + 0.640604
rps6, rpsF SYNW2511 30S ribosomal protein S6chromosome CDS2416673 384 + 0.601562
rps7, rpsG SYNW2136 30S ribosomal protein S7chromosome CDS2026194 471 + 0.622081
rps8, rpsH SYNW2080 30S ribosomal protein S8chromosome CDS1969994 402 + 0.619403
rps9, rpsI SYNW2094 30S ribosomal protein S9chromosome CDS1978484 402 + 0.609453
rpsD,rps4 SYNW1694 30S ribosomal protein S4chromosome CDS1629922 609 + 0.6289
rpsE,rps5 SYNW2083 30S ribosomal protein S5chromosome CDS1971365 648 + 0.660494
rpsT,rps20 SYNW0611 30S ribosomal protein S20chromosome CDS591011 297 + 0.599327
rrf SYNW1753 ribosome recycling factor protein Rrfchromosome CDS1683670 549 + 0.588342
rsuA SYNW0949 putative pseudouridylate synthase specific to ribosomal small subunitchromosome CDS910261 753 + 0.649402
serRS SYNW1894 putative seryl-tRNA synthetasechromosome CDS1805643 1278 + 0.615023
spoU SYNW1631 tRNA/rRNA methyltransferase (SpoU)chromosome CDS1568816 837 - 0.621266
tgt SYNW0244 tRNA-guanine transglycosylasechromosome CDS245216 1122 - 0.64082
thrS SYNW1478 threonyl-tRNA synthetasechromosome CDS1427559 1836 + 0.618736
trpS SYNW1475 t-RNA synthetase, class Ib:Tryptophanyl-tRNA synthetasechromosome CDS1425298 1014 + 0.595661
truA SYNW2092 tRNA pseudouridine synthase Achromosome CDS1976992 900 + 0.623333
truB SYNW0544 putative tRNA pseudouridine 55 synthasechromosome CDS534926 876 - 0.711187
tsf SYNW1091 putative elongation factor EF-Tschromosome CDS1077317 660 + 0.601515
tufA SYNW2138 elongation factor EF-Tuchromosome CDS2028879 1200 + 0.588333
tyrS SYNW0568 t-RNA synthetase, class Ib:Tyrosyl-tRNA synthetasechromosome CDS556583 1248 + 0.654647
valS SYNW2396 valyl-tRNA synthetasechromosome CDS2304930 2745 - 0.656102
yccC SYNW2317 putative L-asparaginasechromosome CDS2217251 1032 - 0.648256