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2024-05-04 18:48:02

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Bordetella bronchiseptica, RB50

Number of genes found: 208

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella bronchiseptica, RB50
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BB2620 putative RNA methyltransferasechromosome CDS2782770 774 + 0.735142
NA BB0058 50S ribosomal protein L17chromosome CDS51052 396 + 0.618687
NA BB3628 phage-related conserved hypothetical proteinchromosome CDS3849720 1008 - 0.657738
NA BB0679 conserved hypothetical proteinchromosome CDS715485 351 + 0.698006
NA BB2429 putative GNAT-family acetyltransferasechromosome CDS2581959 711 + 0.706048
NA BB1357 conserved hypothetical proteinchromosome CDS1450258 1428 - 0.667367
NA BB1022 putative acetyltransferasechromosome CDS1104180 531 - 0.694915
NA BB3488 phage-related conserved hypothetical proteinchromosome CDS3732988 594 - 0.545455
NA BB0292 rRNA methylasechromosome CDS296129 519 + 0.710983
NA BB4022 probable hydrolasechromosome CDS4272795 1482 + 0.740216
NA BB3052 putative lipoproteinchromosome CDS3258041 1146 + 0.708551
NA BB3200 putative amidasechromosome CDS3415165 1356 - 0.70944
NA BB1675 phage-related hypothetical proteinchromosome CDS1774775 372 - 0.612903
NA BB1162 conserved hypothetical proteinchromosome CDS1243848 510 + 0.75098
NA BB3184 conserved hypothetical proteinchromosome CDS3399153 507 + 0.715976
NA BB0262 conserved hypothetical proteinchromosome CDS263678 1335 + 0.756554
NA BB2813 Conserved hypothetical proteinchromosome CDS2975638 423 + 0.678487
NA BB3386 putative ribonucleasechromosome CDS3623214 1464 + 0.659153
NA BB2512 putative heat shock proteinchromosome CDS2665536 381 + 0.713911
NA BB2103 conserved hypothetical proteinchromosome CDS2248537 1014 + 0.693294
NA BB1142 putative amidasechromosome CDS1225152 1386 + 0.770563
NA BB1508 Putative amidasechromosome CDS1613259 1383 + 0.694866
NA BB0499 hypothetical proteinchromosome CDS529856 357 - 0.540616
NA BB3999 conserved hypothetical proteinchromosome CDS4248775 1032 + 0.679264
NA BB3189 putative exported proteinchromosome CDS3403016 582 + 0.707904
NA BB0434 putative 2'-5' RNA ligasechromosome CDS449847 588 - 0.760204
NA BB4095 peptide deformylasechromosome CDS4353755 531 + 0.687382
NA BB0482 hypothetical proteinchromosome CDS515442 582 - 0.496564
NA BB0638 putative amidasechromosome CDS672156 1482 - 0.724696
NA BB3983 putative ATP-dependent RNA helicasechromosome CDS4232973 1272 - 0.690252
NA BB1166 amidasechromosome CDS1247599 1374 + 0.725619
NA BB3382 putative amidasechromosome CDS3613345 1395 - 0.73405
NA BB3156 putative translational inhibitorchromosome CDS3368673 399 + 0.676692
NA BB3779 conserved hypothetical proteinchromosome CDS4003446 351 - 0.643875
NA BB4983 probable amidasechromosome CDS5300198 1428 - 0.697479
NA BB2743 conserved hypothetical proteinchromosome CDS2909467 312 - 0.551282
NA BB1976 putative tRNA/rRNA methyltransferasechromosome CDS2114502 738 + 0.707317
NA BB3824 probable GnaT-family acetyltransferasechromosome CDS4051800 519 - 0.66474
NA BB2175 conserved hypothetical proteinchromosome CDS2321821 1302 + 0.715054
NA BB1225 probable amidasechromosome CDS1318920 1446 - 0.757953
NA BB0405 putative amidasechromosome CDS418146 1419 + 0.725159
NA BB2181 putative adenine-specific methylasechromosome CDS2332207 897 - 0.684504
NA BB3249 conserved hypothetical proteinchromosome CDS3478618 1782 - 0.726712
NA BB2964 hypothetical proteinchromosome CDS3153022 129 + 0.550388
NA BB1605 putative exported proteinchromosome CDS1711631 1374 - 0.70524
NA BB3074 conserved hypothetical proteinchromosome CDS3279460 417 - 0.671463
NA BB2189 phage-related hypothetical proteinchromosome CDS2338549 1170 - 0.632479
NA BB1212 putative exported proteinchromosome CDS1305174 1434 - 0.730126
NA BB1728 probable methyltransferasechromosome CDS1815931 777 - 0.709138
NA BB1458 conserved hypothetical proteinchromosome CDS1559220 603 - 0.72471
NA BB4958 probable aminoacyl-tRNA synthetasechromosome CDS5273087 960 + 0.73125
NA BB3655 phage-related conserved hypothetical proteinchromosome CDS3868367 417 + 0.618705
NA BB0806 conserved hypothetical proteinchromosome CDS846559 660 + 0.716667
NA BB0442 conserved hypothetical proteinchromosome CDS461216 396 - 0.727273
NA BB1760 conserved hypothetical proteinchromosome CDS1848550 393 - 0.689567
NA BB2488 putative amidasechromosome CDS2640240 1461 + 0.743326
NA BB2525 putative RNA pseudouridylate synthasechromosome CDS2679985 732 + 0.695355
NA BB4411 conserved hypothetical proteinchromosome CDS4696824 402 - 0.636816
NA BB0467 conserved hypothetical proteinchromosome CDS495677 405 + 0.65679
NA BB2232 phage-related conserved hypothetical proteinchromosome CDS2366185 594 + 0.545455
NA BB1403 conserved hypothetical proteinchromosome CDS1498220 327 - 0.749235
NA BB4793 putative endoribonucleasechromosome CDS5098780 438 - 0.630137
NA BB4104 putative nucleotidyl transferasechromosome CDS4366689 693 + 0.748918
NA BB1417 conserved hypothetical proteinchromosome CDS1508935 1038 + 0.747591
NA BB2998 putative amidasechromosome CDS3202523 1350 - 0.721482
NA BB1154 conserved hypothetical proteinchromosome CDS1237426 393 + 0.664122
NA BB2716 Conserved hypothetical proteinchromosome CDS2879410 420 - 0.67381
NA BB0905 conserved hypothetical proteinchromosome CDS964741 1092 + 0.662088
NA BB0694 probable amidasechromosome CDS729666 1275 - 0.762353
NA BB0209 putative ATP-dependent RNA helicasechromosome CDS215743 1725 - 0.707246
NA BB4925 amidasechromosome CDS5235372 1284 - 0.71028
NA BB4737 putative endoribonucleasechromosome CDS5038938 384 + 0.71875
NA BB0254 conserved hypothetical proteinchromosome CDS256036 1320 - 0.663636
NA BB3014 conserved hypothetical proteinchromosome CDS3218416 1401 - 0.694504
NA BB3908 seryl-tRNA synthetasechromosome CDS4150574 1356 - 0.670354
NA BB1318 conserved hypothetical proteinchromosome CDS1405615 1119 - 0.742627
NA BB4299 putative amidasechromosome CDS4576378 1305 + 0.744828
NA BB4111 probable amidasechromosome CDS4372264 1398 - 0.725322
NA BB2248 hypothetical proteinchromosome CDS2378588 321 + 0.65109
NA BB1654 conserved hypothetical proteinchromosome CDS1757039 627 + 0.717703
NA BB3206 conserved hypothetical proteinchromosome CDS3421963 1377 - 0.702977
NA BB1230 putative cyclasechromosome CDS1323921 420 - 0.652381
NA BB2940 putative translational inhibitorchromosome CDS3124244 387 - 0.677003
NA BB3261 50S ribosomal protein L31chromosome CDS3490791 267 + 0.614232
NA BB2340 conserved hypothetical proteinchromosome CDS2492629 1359 + 0.690949
NA BB4130 conserved hypothetical proteinchromosome CDS4394669 417 + 0.592326
alaS BB3191 alanyl-tRNA synthetasechromosome CDS3403907 2625 - 0.673143
alcB BB3894 alcaligin biosynthesis proteinchromosome CDS4136978 606 + 0.608911
ansB BB0006 L-asparaginase II precursorchromosome CDS5110 1002 + 0.713573
argS BB4938 arginyl-tRNA synthetasechromosome CDS5247820 1686 + 0.682681
aspS BB0115 aspartyl-tRNA synthetasechromosome CDS116222 1791 + 0.644333
bcr4 BB1623 hypothetical proteinchromosome CDS1726410 522 + 0.664751
cca BB0207 tRNA nucleotidyltransferasechromosome CDS213355 1095 + 0.736073
cumB BB3037 putative zinc-binding hydrolasechromosome CDS3241829 507 - 0.710059
cysS BB1735 cysteinyl-tRNA synthetasechromosome CDS1822711 1458 + 0.699588
dbpA BB4367 probable ATP-dependent RNA helicasechromosome CDS4647674 1389 - 0.676746
def BB0247 polypeptide deformylasechromosome CDS251204 513 + 0.649123
efp BB1840 putative elongation factor Pchromosome CDS1944173 558 - 0.603943
fmt BB0248 methionyl-tRNA formyltransferasechromosome CDS251782 939 + 0.742279
frr BB2608 ribosome recycling factorchromosome CDS2770565 561 + 0.611408
fusA BB4259 elongation factor Gchromosome CDS4534165 2124 - 0.663842
fusA BB0026 elongation factor Gchromosome CDS30132 2103 + 0.627675
gatA BB4531 glutamyl-tRNA(GLN) amidotransferase subunit Achromosome CDS4827647 1539 + 0.729695
gatB BB4532 glutamyl-tRNA(GLN) amidotransferase subunit Bchromosome CDS4829188 1455 + 0.674914
gatC BB4530 glutamyl-tRNA(GLN) amidotransferase subunit Cchromosome CDS4827279 366 + 0.669399
glnS BB4013 putative glutaminyl-tRNA synthetasechromosome CDS4264275 1764 + 0.676871
gltX BB4371 glutamyl-tRNA synthetasechromosome CDS4654199 1446 + 0.690871
glyQ BB4089 glycyl-tRNA synthetase alpha chainchromosome CDS4348002 975 + 0.665641
glyS BB4090 glycyl-tRNA synthetase beta chainchromosome CDS4348978 2139 + 0.714352
gshB BB2152 glutathione synthetasechromosome CDS2300970 957 + 0.666667
hemK BB0385 heme biosynthesis proteinchromosome CDS398331 756 + 0.739418
hisS BB3175 histidyl-tRNA synthetasechromosome CDS3388161 1287 - 0.671329
ileS BB2172 isoleucyl-tRNA synthetasechromosome CDS2317104 2862 - 0.677498
infA BB0052 translation initiation factor IF-1chromosome CDS47867 219 + 0.547945
infA BB1400 translation initiation factor IF-1chromosome CDS1495883 264 - 0.655303
infB BB3246 translation initiation factor IF-2chromosome CDS3473105 2994 - 0.685705
infC BB2151 translation initiation factor IF-3chromosome CDS2300339 495 + 0.622222
ksgA BB4100 dimethyladenosine transferasechromosome CDS4360726 798 - 0.705514
leuS BB3377 leucyl-tRNA synthetasechromosome CDS3607159 2658 + 0.670053
lysS BB2293 lysyl-tRNA synthetasechromosome CDS2421951 1521 - 0.670611
map BB2604 methionine aminopeptidasechromosome CDS2766377 822 - 0.645985
miaA BB4059 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS4317577 942 + 0.72293
omlA BB3943 outer membrane lipoproteinchromosome CDS4191493 549 + 0.63388
pcnB BB4063 poly(A) polymerasechromosome CDS4321261 1356 + 0.675516
pheS BB2040 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2187431 1047 + 0.644699
pnp BB3881 polyribonucleotide nucleotidyltransferasechromosome CDS4120380 2160 - 0.665741
prfA BB0384 peptide chain release factor 1chromosome CDS397181 1083 + 0.671283
prfB BB2295 peptide chain release factor 2chromosome CDS2424263 1105 - 0.633484
prfC BB4916 peptide chain release factor 3chromosome CDS5225463 1608 + 0.66107
prmA BB4388 ribosomal protein L11 methyltransferasechromosome CDS4675102 924 - 0.71645
proS BB4232 prolyl-tRNA synthetasechromosome CDS4506904 1731 + 0.673021
pth BB0903 peptidyl-tRNA hydrolasechromosome CDS963242 648 + 0.665123
queA BB1363 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1457291 1074 - 0.723464
rbfA BB3245 ribosome-binding factor Achromosome CDS3472676 402 - 0.624378
rhlE BB4914 putative ATP-dependent RNA helicasechromosome CDS5223306 1446 + 0.71231
rimM BB3187 16S rRNA processing proteinchromosome CDS3401663 624 - 0.708333
rluC BB3768 ribosomal large subunit pseudouridine synthase Cchromosome CDS3988563 966 - 0.671843
rluD BB3598 ribosomal large subunit pseudouridine synthase Dchromosome CDS3823045 963 - 0.706127
rne BB3769 ribonuclease Echromosome CDS3990036 3141 + 0.697549
rnpA BB4991 ribonuclease P protein componentchromosome CDS5312203 372 + 0.685484
rph BB2961 ribonuclease PHchromosome CDS3150780 741 - 0.7139
rplA BB0011 50S ribosomal protein L1chromosome CDS9557 699 + 0.645207
rplB BB0032 50S ribosomal protein L2chromosome CDS35839 828 + 0.648551
rplC BB0029 50S ribosomal protein L3chromosome CDS34222 702 + 0.649573
rplD BB0030 50S ribosomal protein L4chromosome CDS34928 618 + 0.614887
rplE BB0043 50S ribosomal protein L5chromosome CDS43147 540 + 0.57963
rplF BB0046 50S ribosomal protein L6chromosome CDS44421 534 + 0.602996
rplI BB1917 50s ribosomal protein l9chromosome CDS2038368 456 + 0.655702
rplJ BB0012 50S ribosomal protein L10chromosome CDS10498 525 + 0.613333
rplK BB0010 50S ribosomal protein L11chromosome CDS9123 432 + 0.634259
rplL BB0013 50S ribosomal protein L7/L12chromosome CDS11104 384 + 0.627604
rplM BB4357 50s ribosomal protein L13chromosome CDS4638732 468 - 0.559829
rplN BB0041 50S ribosomal protein L14chromosome CDS42435 369 + 0.604336
rplO BB0050 50S ribosomal protein L15chromosome CDS46077 441 + 0.659864
rplP BB0036 50S ribosomal protein L16chromosome CDS38091 417 + 0.633094
rplR BB0047 50S ribosomal protein L18chromosome CDS44976 363 + 0.644628
rplS BB3443 50S ribosomal protein L19chromosome CDS3686694 381 - 0.611549
rplT BB2039 50s ribosomal proteinchromosome CDS2187021 360 + 0.644444
rplU BB0314 50S ribosomal protein L21chromosome CDS318137 312 - 0.573718
rplV BB0034 50S ribosomal protein L22chromosome CDS36958 330 + 0.572727
rplW BB0031 50S ribosomal protein L23chromosome CDS35542 297 + 0.565657
rplX BB0042 50S ribosomal protein L24chromosome CDS42814 321 + 0.629283
rplY BB0902 50S ribosomal protein L25chromosome CDS962550 615 + 0.645528
rpmA BB0313 50S ribosomal protein L27chromosome CDS317843 261 - 0.639847
rpmB BB3371 50S ribosomal protein L28chromosome CDS3601977 237 + 0.628692
rpmC BB0037 50S ribosomal protein L29chromosome CDS38518 192 + 0.604167
rpmD BB0049 50S ribosomal protein L30chromosome CDS45882 186 + 0.623656
rpmF BB3760 50s ribosomal protein l32chromosome CDS3983035 183 - 0.584699
rpmG BB3372 50S ribosomal protein L33chromosome CDS3602277 168 + 0.511905
rpmH BB4990 50S ribosomal protein L34chromosome CDS5311973 135 + 0.651852
rpmI BB2038 50s ribosomal protein l35chromosome CDS2186808 198 + 0.570707
rpmJ BB0053 50S ribosomal protein l36chromosome CDS48120 114 + 0.535088
rpoN BB4506 probable sigma(54) modulation proteinchromosome CDS4805069 339 + 0.572271
rpsA BB3467 30S ribosomal protein S1chromosome CDS3709785 1731 - 0.630849
rpsB BB2605 30S ribosomal protein S2chromosome CDS2767925 750 + 0.624
rpsC BB0035 30S ribosomal protein S3chromosome CDS37297 792 + 0.633838
rpsD BB0056 30S ribosomal protein S4chromosome CDS49069 624 + 0.63141
rpsE BB0048 30S ribosomal protein S5chromosome CDS45354 525 + 0.620952
rpsF BB1914 30s ribosomal protein s6chromosome CDS2037143 474 + 0.624473
rpsG BB0025 30S ribosomal protein S7chromosome CDS29644 471 + 0.600849
rpsH BB0045 30S ribosomal protein S8chromosome CDS44015 396 + 0.611111
rpsI BB4356 30s ribosomal protein S9chromosome CDS4638330 393 - 0.620865
rpsJ BB0028 30S ribosomal protein S10chromosome CDS33565 312 + 0.602564
rpsK BB0055 30S ribosomal protein S11chromosome CDS48656 402 + 0.636816
rpsL BB0024 30S ribosomal protein S12chromosome CDS29040 441 + 0.591837
rpsM BB0054 30S ribosomal protein S13chromosome CDS48275 366 + 0.625683
rpsN BB0044 30S ribosomal protein S14chromosome CDS43699 306 + 0.591503
rpsO BB3882 30S ribosomal protein S15chromosome CDS4122630 270 - 0.566667
rpsP BB3188 30S ribosomal protein S16chromosome CDS3402452 306 - 0.594771
rpsQ BB0038 30S ribosomal protein S17chromosome CDS38711 282 + 0.578014
rpsR BB1916 30s ribosomal protein s18chromosome CDS2038080 273 + 0.578755
rpsS BB0033 30S ribosomal protein S19chromosome CDS36679 276 + 0.576087
rpsU BB3163 30S ribosomal protein S21chromosome CDS3376289 240 - 0.5875
rpst BB2001 30s ribosomal protein s20chromosome CDS2139785 264 - 0.625
rrmJ BB1459 ribosomal RNA large subunit methyltransferase jchromosome CDS1559841 633 + 0.650869
tgt BB1362 queuine tRNA-ribosyltransferasechromosome CDS1456158 1137 - 0.682498
thrS BB2150 threonyl-tRNA synthetasechromosome CDS2298318 1950 + 0.615385
trmD BB3186 tRNA (guanine-N1)-methyltransferasechromosome CDS3400890 774 - 0.717054
trmU BB1950 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2088085 1116 + 0.682796
trpS BB3602 tryptophanyl-tRNA synthetasechromosome CDS3829667 1356 - 0.679941
truA BB2135 tRNA pseudouridine synthase Achromosome CDS2284237 813 + 0.688807
truB BB3244 tRNA pseudouridine synthase Bchromosome CDS3471897 735 - 0.67483
tsf BB2606 elongation factor Tschromosome CDS2768807 930 + 0.625806
tuf BB0027 elongation factor Tuchromosome CDS32311 1191 + 0.626364
tuf BB0007 elongation factor Tuchromosome CDS6707 1191 + 0.626364
tyrS BB4350 tyrosyl-tRNA synthetasechromosome CDS4631717 1230 - 0.660976
valS BB3180 valyl-tRNA synthetasechromosome CDS3393234 2883 + 0.668401
wbmR BB0129 putative formyl transferasechromosome CDS132244 930 + 0.560215