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2024-05-02 21:01:56

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Bordetella parapertussis 12822, 12822

Number of genes found: 198

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella parapertussis 12822, 12822
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BPP0933 putative amidasechromosome CDS1005142 1392 + 0.762931
NA BPP3938 conserved hypothetical proteinchromosome CDS4261978 402 - 0.634328
NA BPP4397 probable amidasechromosome CDS4738523 1182 - 0.69797
NA BPP3587 probable hydrolasechromosome CDS3874780 1482 + 0.739541
NA BPP1419 putative amidasechromosome CDS1517882 1461 + 0.740589
NA BPP3564 conserved hypothetical proteinchromosome CDS3850797 1032 + 0.678295
NA BPP2974 putative translational inhibitorchromosome CDS3196466 387 - 0.674419
NA BPP1438 putative heat shock proteinchromosome CDS1536901 381 + 0.713911
NA BPP0720 conserved hypothetical proteinchromosome CDS761650 660 + 0.716667
NA BPP0259 conserved hypothetical proteinchromosome CDS268011 1425 + 0.746667
NA BPP2258 conserved hypothetical proteinchromosome CDS2404340 627 + 0.719298
NA BPP0494 hypothetical proteinchromosome CDS528255 441 - 0.557823
NA BPP0440 conserved hypothetical proteinchromosome CDS466068 396 - 0.729798
NA BPP0953 conserved hypothetical proteinchromosome CDS1023836 510 + 0.75098
NA BPP2998 hypothetical proteinchromosome CDS3225182 129 + 0.542636
NA BPP1915 conserved hypothetical proteinchromosome CDS2049982 1014 + 0.693294
NA BPP2112 Putative amidasechromosome CDS2260596 1383 + 0.695589
NA BPP3696 conserved hypothetical proteinchromosome CDS3996558 417 + 0.592326
NA BPP1451 putative RNA pseudouridylate synthasechromosome CDS1551277 732 + 0.693989
NA BPP2743 conserved hypothetical proteinchromosome CDS2939253 312 + 0.548077
NA BPP0672 conserved hypothetical proteinchromosome CDS711136 351 + 0.692308
NA BPP3669 putative nucleotidyl transferasechromosome CDS3968577 693 + 0.747475
NA BPP3089 putative lipoproteinchromosome CDS3329830 1146 + 0.706806
NA BPP0821 conserved hypothetical proteinchromosome CDS882313 1092 + 0.662088
NA BPP1987 conserved hypothetical proteinchromosome CDS2123250 1302 + 0.714286
NA BPP1722 putative ribonucleasechromosome CDS1838339 1464 - 0.657787
NA BPP2065 conserved hypothetical proteinchromosome CDS2210398 603 - 0.723051
NA BPP3676 probable amidasechromosome CDS3974153 1398 - 0.723891
NA BPP1187 conserved hypothetical proteinchromosome CDS1265901 327 - 0.749235
NA BPP1276 conserved hypothetical proteinchromosome CDS1375607 1359 + 0.690213
NA BPP3032 putative amidasechromosome CDS3274325 1350 - 0.722963
NA BPP4339 amidasechromosome CDS4673697 1266 - 0.708531
NA BPP2879 putative amidasechromosome CDS3082086 1356 - 0.70944
NA BPP1847 50S ribosomal protein L31chromosome CDS1970194 267 - 0.614232
NA BPP1363 putative GNAT-family acetyltransferasechromosome CDS1463908 711 + 0.707454
NA BPP1016 putative cyclasechromosome CDS1092774 420 - 0.647619
NA BPP2276 probable methyltransferasechromosome CDS2423471 777 - 0.707851
NA BPP2531 putative tRNA/rRNA methyltransferasechromosome CDS2725175 738 + 0.708672
NA BPP0403 putative amidasechromosome CDS422900 1473 + 0.725051
NA BPP2690 Conserved hypothetical proteinchromosome CDS2888739 423 - 0.678487
NA BPP1011 probable amidasechromosome CDS1087777 1446 - 0.758645
NA BPP1141 conserved hypothetical proteinchromosome CDS1218146 1428 - 0.666667
NA BPP3476 conserved hypothetical proteinchromosome CDS3759739 426 + 0.65493
NA BPP0432 putative 2'-5' RNA ligasechromosome CDS454659 588 - 0.758503
NA BPP4102 putative amidasechromosome CDS4435203 1329 + 0.716328
NA BPP2835 putative translational inhibitorchromosome CDS3035569 363 + 0.683196
NA BPP0058 50S ribosomal protein L17chromosome CDS51042 396 + 0.621212
NA BPP1726 putative amidasechromosome CDS1847907 1395 + 0.732616
NA BPP3328 conserved hypothetical proteinchromosome CDS3586993 351 - 0.643875
NA BPP0205 putative ATP-dependent RNA helicasechromosome CDS219184 1749 - 0.702687
NA BPP2208 putative exported proteinchromosome CDS2358021 1374 - 0.703057
NA BPP2309 conserved hypothetical proteinchromosome CDS2456088 393 - 0.689567
NA BPP1200 conserved hypothetical proteinchromosome CDS1276026 1053 + 0.746439
NA BPP0632 putative amidasechromosome CDS671137 1482 - 0.724022
NA BPP0467 conserved hypothetical proteinchromosome CDS497237 405 + 0.649383
NA BPP1542 putative RNA methyltransferasechromosome CDS1649448 825 + 0.735758
NA BPP2000 hypothetical proteinchromosome CDS2140428 321 + 0.65109
NA BPP0687 probable amidasechromosome CDS725281 1275 - 0.759216
NA BPP3548 putative ATP-dependent RNA helicasechromosome CDS3835146 1434 - 0.679219
NA BPP1102 conserved hypothetical proteinchromosome CDS1173543 1119 - 0.742627
NA BPP0487 chromosome CDS520700 297 - 0.639731
NA BPP3112 conserved hypothetical proteinchromosome CDS3351236 417 - 0.673861
NA BPP0999 putative exported proteinchromosome CDS1074999 1434 - 0.728731
NA BPP4372 probable aminoacyl-tRNA synthetasechromosome CDS4711411 960 + 0.729167
NA BPP3459 seryl-tRNA synthetasechromosome CDS3736621 1356 - 0.670354
NA BPP0289 rRNA methylasechromosome CDS300782 519 + 0.712909
NA BPP0250 conserved hypothetical proteinchromosome CDS259423 1320 - 0.662121
NA BPP1993 putative adenine-specific methylasechromosome CDS2133637 897 - 0.685619
NA BPP0945 conserved hypothetical proteinchromosome CDS1017414 393 + 0.664122
NA BPP1232 conserved hypothetical proteinchromosome CDS1315921 417 + 0.673861
NA BPP3660 peptide deformylasechromosome CDS3955643 531 + 0.683616
NA BPP2769 Conserved hypothetical proteinchromosome CDS2968671 420 + 0.67619
NA BPP3051 conserved hypothetical proteinchromosome CDS3290217 1455 - 0.690034
NA BPP2863 conserved hypothetical proteinchromosome CDS3066068 507 + 0.717949
NA BPP1859 conserved hypothetical proteinchromosome CDS1980846 1779 + 0.724002
alaS BPP2870 alanyl-tRNA synthetasechromosome CDS3070822 2625 - 0.673143
alcB BPP3444 alcaligin biosynthesis proteinchromosome CDS3721711 606 + 0.610561
ansB BPP0006 L-asparaginase II precursorchromosome CDS5170 1002 + 0.713573
argS BPP4352 arginyl-tRNA synthetasechromosome CDS4686196 1686 + 0.681495
aspS BPP0115 aspartyl-tRNA synthetasechromosome CDS120417 1791 + 0.643216
cca BPP0203 tRNA nucleotidyltransferasechromosome CDS216796 1095 + 0.734247
cumB BPP3074 putative zinc-binding hydrolasechromosome CDS3313639 507 - 0.708087
cysS BPP2283 cysteinyl-tRNA synthetasechromosome CDS2430053 1656 + 0.701087
dbpA BPP3894 probable ATP-dependent RNA helicasechromosome CDS4212857 1389 - 0.677466
def BPP0243 polypeptide deformylasechromosome CDS254591 513 + 0.649123
efp BPP2390 putative elongation factor Pchromosome CDS2552837 558 - 0.600358
fmt BPP0244 methionyl-tRNA formyltransferasechromosome CDS255244 864 + 0.75
frr BPP1530 ribosome recycling factorchromosome CDS1637294 561 + 0.613191
fusA BPP3814 elongation factor Gchromosome CDS4128629 2118 - 0.664306
fusA BPP0026 elongation factor Gchromosome CDS30133 2103 + 0.625773
gatA BPP4058 glutamyl-tRNA(GLN) amidotransferase subunit Achromosome CDS4392481 1539 + 0.730344
gatB BPP4059 glutamyl-tRNA(GLN) amidotransferase subunit Bchromosome CDS4394022 1455 + 0.672165
gatC BPP4057 glutamyl-tRNA(GLN) amidotransferase subunit Cchromosome CDS4392113 366 + 0.669399
glnS BPP3578 putative glutaminyl-tRNA synthetasechromosome CDS3866295 1764 + 0.679138
gltX BPP3898 glutamyl-tRNA synthetasechromosome CDS4219404 1446 + 0.688797
glyQ BPP3654 glycyl-tRNA synthetase alpha chainchromosome CDS3949890 975 + 0.664615
glyS BPP3655 glycyl-tRNA synthetase beta chainchromosome CDS3950866 2139 + 0.713417
gshB BPP1965 glutathione synthetasechromosome CDS2102409 957 + 0.666667
hemK BPP0383 heme biosynthesis proteinchromosome CDS403161 813 + 0.738007
hisS BPP2854 histidyl-tRNA synthetasechromosome CDS3055076 1305 - 0.670498
ileS BPP1984 isoleucyl-tRNA synthetasechromosome CDS2118533 2862 - 0.676799
infA BPP1184 translation initiation factor IF-1chromosome CDS1263564 264 - 0.655303
infA BPP0052 translation initiation factor IF-1chromosome CDS47857 219 + 0.552511
infB BPP1862 translation initiation factor IF-2chromosome CDS1985147 2910 + 0.680756
infC BPP1964 translation initiation factor IF-3chromosome CDS2101778 495 + 0.622222
ksgA BPP3665 dimethyladenosine transferasechromosome CDS3962614 798 - 0.705514
leuS BPP1731 leucyl-tRNA synthetasechromosome CDS1852830 2658 - 0.6693
lysS BPP2045 lysyl-tRNA synthetasechromosome CDS2183879 1521 - 0.670611
map BPP1526 methionine aminopeptidasechromosome CDS1633111 822 - 0.645985
miaA BPP3624 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS3919413 942 + 0.721868
omlA BPP3495 outer membrane lipoproteinchromosome CDS3778888 549 + 0.63388
pcnB BPP3628 poly(A) polymerasechromosome CDS3923159 1356 + 0.674779
pheS BPP2598 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2799409 1047 + 0.644699
pnp BPP3431 polyribonucleotide nucleotidyltransferasechromosome CDS3705174 2160 - 0.665278
prfA BPP0382 peptide chain release factor 1chromosome CDS402068 1083 + 0.671283
prfB BPP2047 peptide chain release factor 2chromosome CDS2186191 1105 - 0.631674
prfC BPP4330 peptide chain release factor 3chromosome CDS4663788 1608 + 0.659826
prmA BPP3915 ribosomal protein L11 methyltransferasechromosome CDS4240255 924 - 0.719697
proS BPP3787 prolyl-tRNA synthetasechromosome CDS4101384 1731 + 0.674177
pth BPP0819 peptidyl-tRNA hydrolasechromosome CDS880814 648 + 0.666667
queA BPP1147 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1225181 1074 - 0.724395
rbfA BPP1863 ribosome-binding factor Achromosome CDS1988084 402 + 0.621891
rhlE BPP4328 putative ATP-dependent RNA helicasechromosome CDS4661631 1446 + 0.711618
rimM BPP2866 16S rRNA processing proteinchromosome CDS3068578 624 - 0.706731
rluC BPP3317 ribosomal large subunit pseudouridine synthase Cchromosome CDS3572105 966 - 0.669772
rluD BPP3198 ribosomal large subunit pseudouridine synthase Dchromosome CDS3443051 963 - 0.709242
rne BPP3318 ribonuclease Echromosome CDS3573578 3126 + 0.698656
rnpA BPP4403 ribonuclease P protein componentchromosome CDS4746573 372 + 0.685484
rph BPP2995 ribonuclease PHchromosome CDS3222927 753 - 0.711819
rplA BPP0011 50S ribosomal protein L1chromosome CDS9617 699 + 0.643777
rplB BPP0032 50S ribosomal protein L2chromosome CDS35834 828 + 0.648551
rplC BPP0029 50S ribosomal protein L3chromosome CDS34217 702 + 0.649573
rplD BPP0030 50S ribosomal protein L4chromosome CDS34923 618 + 0.614887
rplE BPP0043 50S ribosomal protein L5chromosome CDS43137 540 + 0.57963
rplF BPP0046 50S ribosomal protein L6chromosome CDS44411 534 + 0.601124
rplI BPP2469 50s ribosomal protein l9chromosome CDS2646480 456 + 0.653509
rplJ BPP0012 50S ribosomal protein L10chromosome CDS10558 525 + 0.613333
rplK BPP0010 50S ribosomal protein L11chromosome CDS9183 432 + 0.634259
rplL BPP0013 50S ribosomal protein L7/L12chromosome CDS11164 384 + 0.625
rplM BPP3884 50s ribosomal protein L13chromosome CDS4203917 468 - 0.559829
rplN BPP0041 50S ribosomal protein L14chromosome CDS42425 369 + 0.604336
rplO BPP0050 50S ribosomal protein L15chromosome CDS46067 441 + 0.662132
rplP BPP0036 50S ribosomal protein L16chromosome CDS38086 417 + 0.633094
rplR BPP0047 50S ribosomal protein L18chromosome CDS44966 363 + 0.641873
rplS BPP1665 50S ribosomal protein L19chromosome CDS1776097 381 + 0.614173
rplT BPP2597 50s ribosomal proteinchromosome CDS2798999 360 + 0.644444
rplU BPP0311 50S ribosomal protein L21chromosome CDS322790 312 - 0.573718
rplV BPP0034 50S ribosomal protein L22chromosome CDS36953 330 + 0.572727
rplW BPP0031 50S ribosomal protein L23chromosome CDS35537 297 + 0.569024
rplX BPP0042 50S ribosomal protein L24chromosome CDS42804 321 + 0.629283
rplY BPP0818 50S ribosomal protein L25chromosome CDS880122 615 + 0.643902
rpmA BPP0310 50S ribosomal protein L27chromosome CDS322496 261 - 0.639847
rpmB BPP1737 50S ribosomal protein L28chromosome CDS1860441 237 - 0.628692
rpmC BPP0037 50S ribosomal protein L29chromosome CDS38513 192 + 0.604167
rpmD BPP0049 50S ribosomal protein L30chromosome CDS45872 186 + 0.623656
rpmF BPP3309 50s ribosomal protein l32chromosome CDS3566577 183 - 0.584699
rpmG BPP1736 50S ribosomal protein L33chromosome CDS1860210 168 - 0.511905
rpmH BPP4402 50S ribosomal protein L34chromosome CDS4746343 135 + 0.651852
rpmI BPP2596 50s ribosomal protein l35chromosome CDS2798786 198 + 0.565657
rpmJ BPP0053 50S ribosomal protein l36chromosome CDS48110 114 + 0.535088
rpoN BPP4033 probable sigma(54) modulation proteinchromosome CDS4369968 339 + 0.572271
rpsA BPP3128 30S ribosomal protein S1chromosome CDS3365430 1731 - 0.630849
rpsB BPP1527 30S ribosomal protein S2chromosome CDS1634654 750 + 0.624
rpsC BPP0035 30S ribosomal protein S3chromosome CDS37292 792 + 0.635101
rpsD BPP0056 30S ribosomal protein S4chromosome CDS49059 624 + 0.633013
rpsE BPP0048 30S ribosomal protein S5chromosome CDS45344 525 + 0.619048
rpsF BPP2466 30s ribosomal protein s6chromosome CDS2645255 474 + 0.622363
rpsG BPP0025 30S ribosomal protein S7chromosome CDS29645 471 + 0.598726
rpsH BPP0045 30S ribosomal protein S8chromosome CDS44005 396 + 0.611111
rpsI BPP3883 30s ribosomal protein S9chromosome CDS4203515 393 - 0.620865
rpsJ BPP0028 30S ribosomal protein S10chromosome CDS33566 312 + 0.596154
rpsK BPP0055 30S ribosomal protein S11chromosome CDS48646 402 + 0.636816
rpsL BPP0024 30S ribosomal protein S12chromosome CDS29104 378 + 0.611111
rpsM BPP0054 30S ribosomal protein S13chromosome CDS48265 366 + 0.625683
rpsN BPP0044 30S ribosomal protein S14chromosome CDS43689 306 + 0.591503
rpsO BPP3432 30S ribosomal protein S15chromosome CDS3707424 270 - 0.566667
rpsP BPP2867 30S ribosomal protein S16chromosome CDS3069367 306 - 0.598039
rpsQ BPP0038 30S ribosomal protein S17chromosome CDS38706 282 + 0.578014
rpsR BPP2468 30s ribosomal protein s18chromosome CDS2646192 273 + 0.578755
rpsS BPP0033 30S ribosomal protein S19chromosome CDS36674 276 + 0.576087
rpsU BPP2842 30S ribosomal protein S21chromosome CDS3043203 240 - 0.5875
rpst BPP2556 30s ribosomal protein s20chromosome CDS2750475 264 - 0.621212
rrmJ BPP2066 ribosomal RNA large subunit methyltransferase jchromosome CDS2211019 633 + 0.650869
tgt BPP1146 queuine tRNA-ribosyltransferasechromosome CDS1224048 1137 - 0.682498
thrS BPP1963 threonyl-tRNA synthetasechromosome CDS2099757 1950 + 0.614872
trmD BPP2865 tRNA (guanine-N1)-methyltransferasechromosome CDS3067805 774 - 0.717054
trmU BPP2503 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2697449 1116 + 0.681004
trpS BPP3202 tryptophanyl-tRNA synthetasechromosome CDS3449673 1356 - 0.679204
truA BPP1947 tRNA pseudouridine synthase Achromosome CDS2085683 813 + 0.688807
truB BPP1864 tRNA pseudouridine synthase Bchromosome CDS1988530 735 + 0.673469
tsf BPP1528 elongation factor Tschromosome CDS1635536 930 + 0.622581
tuf BPP0027 elongation factor Tuchromosome CDS32312 1191 + 0.625525
tufA BPP0007 elongation factor Tuchromosome CDS6767 1191 + 0.625525
tyrS BPP3877 tyrosyl-tRNA synthetasechromosome CDS4196902 1230 - 0.660163
valS BPP2859 valyl-tRNA synthetasechromosome CDS3060149 2883 + 0.66736
wbmQ BPP0128 putative formyl transferasechromosome CDS135205 825 + 0.636364
wbmR BPP0127 putative formyl transferasechromosome CDS134253 930 + 0.617204
wbmU BPP0124 putative formyl transferasechromosome CDS131817 939 + 0.638978