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2024-04-29 02:50:28

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Bordetella pertussis, Tohama I

Number of genes found: 170

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella pertussis, Tohama I
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BP0313 conserved hypothetical proteinchromosome CDS318025 402 + 0.634328
NA BP1769 hypothetical proteinchromosome CDS1860413 321 + 0.65109
NA BP1556 conserved hypothetical proteinchromosome CDS1634050 627 + 0.717703
NA BP1756 conserved hypothetical proteinchromosome CDS1842178 1302 + 0.708141
NA BP2317 putative ribonucleasechromosome CDS2449001 1464 + 0.65847
NA BP1611 putative translational inhibitorchromosome CDS1693317 387 + 0.674419
NA BP3057 putative ATP-dependent RNA helicasechromosome CDS3256610 1725 + 0.705507
NA BP2470 seryl-tRNA synthetasechromosome CDS2612694 1356 - 0.669617
NA BP1827 putative amidasechromosome CDS1917678 1356 + 0.710914
NA BP2039 putative amidasechromosome CDS2156604 1395 + 0.735484
NA BP1514 conserved hypothetical proteinchromosome CDS1590265 327 - 0.749235
NA BP3321 putative amidasechromosome CDS3541187 1329 - 0.716328
NA BP3584 conserved hypothetical proteinchromosome CDS3797269 351 + 0.649573
NA BP3426 putative amidasechromosome CDS3634068 1419 - 0.725863
NA BP1935 conserved hypothetical proteinchromosome CDS2038630 393 - 0.692112
NA BP2880 conserved hypothetical proteinchromosome CDS3057958 510 - 0.747059
NA BP0039 peptide deformylasechromosome CDS42688 531 + 0.683616
NA BP1838 putative exported proteinchromosome CDS1930578 582 - 0.706186
NA BP1434 putative RNA methyltransferasechromosome CDS1509056 774 + 0.73385
NA BP3121 conserved hypothetical proteinchromosome CDS3326031 1092 - 0.660256
NA BP1725 conserved hypothetical proteinchromosome CDS1808947 1401 + 0.69379
NA BP0982 putative RNA pseudouridylate synthasechromosome CDS1019954 732 + 0.691257
NA BP3527 putative tRNA/rRNA methyltransferasechromosome CDS3739060 738 + 0.707317
NA BP1585 hypothetical proteinchromosome CDS1663223 129 - 0.542636
NA BP0487 probable amidasechromosome CDS498446 1428 - 0.697479
NA BP3327 putative nucleotidyl transferasechromosome CDS3546736 693 - 0.746032
NA BP1232 50S ribosomal protein L31chromosome CDS1296053 267 - 0.617977
NA BP3414 conserved hypothetical proteinchromosome CDS3622647 1032 + 0.679264
NA BP0545 conserved hypothetical proteinchromosome CDS553378 1320 + 0.662121
NA BP0518 conserved hypothetical proteinchromosome CDS525210 396 - 0.732323
NA BP0569 conserved hypothetical proteinchromosome CDS574783 1335 + 0.755805
NA BP1079 conserved hypothetical proteinchromosome CDS1128667 603 + 0.726368
NA BP3395 putative ATP-dependent RNA helicasechromosome CDS3603766 1434 - 0.679219
NA BP3713 putative amidasechromosome CDS3921312 1305 - 0.743295
NA BP1085 conserved hypothetical proteinchromosome CDS1133144 1014 + 0.693294
NA BP2875 amidasechromosome CDS3052306 1374 - 0.724891
NA BP1243 conserved hypothetical proteinchromosome CDS1305600 1089 + 0.707071
NA BP1874 putative amidasechromosome CDS1960746 1350 + 0.726667
NA BP2609 conserved hypothetical proteinchromosome CDS2760880 1359 - 0.690949
NA BP1901 probable methyltransferasechromosome CDS2003711 777 - 0.710425
NA BP1528 conserved hypothetical proteinchromosome CDS1600692 1053 + 0.749288
NA BP0130 amidasechromosome CDS127034 1254 + 0.708931
NA BP0858 probable GnaT-family acetyltransferasechromosome CDS890698 519 + 0.662813
NA BP2658 conserved hypothetical proteinchromosome CDS2815004 417 - 0.671463
NA BP0601 rRNA methylasechromosome CDS607459 471 + 0.70276
NA BP1244 conserved hypothetical proteinchromosome CDS1306706 1767 + 0.726655
NA BP0657 putative endoribonucleasechromosome CDS665382 429 - 0.634033
NA BP0432 conserved hypothetical proteinchromosome CDS436764 405 - 0.651852
NA BP1843 conserved hypothetical proteinchromosome CDS1934516 474 - 0.725738
NA BP0722 probable amidasechromosome CDS734230 1398 - 0.724607
NA BP1762 putative adenine-specific methylasechromosome CDS1853613 897 - 0.686734
NA BP2637 putative lipoproteinchromosome CDS2793654 1203 + 0.702411
NA BP1041 conserved hypothetical proteinchromosome CDS1083691 1344 - 0.665179
NA BP3643 50S ribosomal protein L17chromosome CDS3847298 396 + 0.616162
alaS BP1836 alanyl-tRNA synthetasechromosome CDS1927646 2625 + 0.672
alcB BP2457 alcaligin biosynthesis proteinchromosome CDS2599175 606 + 0.608911
argS BP0115 arginyl-tRNA synthetasechromosome CDS111937 1788 - 0.688479
aspS BP0709 aspartyl-tRNA synthetasechromosome CDS723420 1791 + 0.648241
cca BP3059 tRNA nucleotidyltransferasechromosome CDS3259628 1095 - 0.73516
cumB BP1700 putative zinc-binding hydrolasechromosome CDS1784095 450 + 0.711111
cysS BP1908 cysteinyl-tRNA synthetasechromosome CDS2010516 1461 + 0.698152
dbpA BP2973 probable ATP-dependent RNA helicasechromosome CDS3158506 1389 - 0.678906
def BP0552 polypeptide deformylasechromosome CDS559017 513 - 0.653021
efp BP2010 putative elongation factor Pchromosome CDS2121062 558 - 0.605735
fmt BP0551 methionyl-tRNA formyltransferasechromosome CDS558013 939 - 0.744409
frr BP1422 ribosome recycling factorchromosome CDS1496851 561 + 0.613191
fusA BP3610 elongation factor Gchromosome CDS3826385 2103 + 0.625773
gatA BP0372 glutamyl-tRNA(GLN) amidotransferase subunit Achromosome CDS373075 1539 - 0.729045
gatB BP0371 glutamyl-tRNA(GLN) amidotransferase subunit Bchromosome CDS371618 1455 - 0.672165
gatC BP0373 glutamyl-tRNA(GLN) amidotransferase subunit Cchromosome CDS374616 309 - 0.692557
glnS BP3226 putative glutaminyl-tRNA synthetasechromosome CDS3438453 1764 + 0.675737
gltX BP2978 glutamyl-tRNA synthetasechromosome CDS3166143 1383 + 0.69342
glyQ BP0033 glycyl-tRNA synthetase alpha chainchromosome CDS37013 912 + 0.661184
glyS BP0034 glycyl-tRNA synthetase beta chainchromosome CDS37926 2139 + 0.713417
gshB BP1499 glutathione synthetasechromosome CDS1577421 957 + 0.665622
hemK BP0679 heme biosynthesis proteinchromosome CDS695609 813 + 0.740467
hisS BP2198 histidyl-tRNA synthetasechromosome CDS2319344 1305 - 0.668966
ileS BP1753 isoleucyl-tRNA synthetasechromosome CDS1837609 2862 - 0.671558
infA BP1019 translation initiation factor IF-1chromosome CDS1063013 264 - 0.647727
infA BP3637 translation initiation factor IF-1chromosome CDS3844114 219 + 0.552511
infB BP1247 translation initiation factor IF-2chromosome CDS1310993 2994 + 0.684703
infC BP1498 translation initiation factor IF-3chromosome CDS1576790 495 + 0.624242
ksgA BP3331 dimethyladenosine transferasechromosome CDS3552594 798 + 0.704261
leuS BP2044 leucyl-tRNA synthetasechromosome CDS2161527 2658 - 0.670805
lysS BP1102 lysyl-tRNA synthetasechromosome CDS1151365 1521 - 0.671269
map BP1418 methionine aminopeptidasechromosome CDS1492663 822 - 0.645985
miaA BP0243 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS250844 942 - 0.72293
omlA BP2508 outer membrane lipoproteinchromosome CDS2656769 549 + 0.632058
pcnB BP0239 poly(A) polymerasechromosome CDS246684 1356 - 0.674779
pheS BP2574 phenylalanyl-tRNA synthetase alpha chainchromosome CDS2726879 1047 - 0.642789
pnp BP0795 polyribonucleotide nucleotidyltransferasechromosome CDS816654 2160 + 0.665278
prfA BP0678 peptide chain release factor 1chromosome CDS694516 1083 + 0.67313
prfB BP1104 peptide chain release factor 2chromosome CDS1153677 1105 - 0.631674
prfC BP0172 peptide chain release factor 3chromosome CDS171197 1632 + 0.660539
proS BP3348 prolyl-tRNA synthetasechromosome CDS3569728 1731 - 0.673599
pth BP3123 peptidyl-tRNA hydrolasechromosome CDS3327974 597 - 0.676717
queA BP1050 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1093007 1044 - 0.731801
rbfA BP1248 ribosome-binding factor Achromosome CDS1314014 402 + 0.624378
rhlE BP0170 putative ATP-dependent RNA helicasechromosome CDS169079 1431 + 0.700908
rimM BP1840 16S rRNA processing proteinchromosome CDS1931889 624 + 0.701923
rluC BP0477 ribosomal large subunit pseudouridine synthase Cchromosome CDS489007 951 + 0.670873
rluD BP1147 ribosomal large subunit pseudouridine synthase Dchromosome CDS1213105 963 + 0.71028
rne BP0475 ribonuclease Echromosome CDS485356 3129 - 0.697667
rnpA BP0493 ribonuclease P protein componentchromosome CDS506608 372 + 0.685484
rph BP1588 ribonuclease PHchromosome CDS1664855 741 + 0.712551
rplA BP0011 50S ribosomal protein L1chromosome CDS9572 699 + 0.640916
rplB BP3616 50S ribosomal protein L2chromosome CDS3832092 828 + 0.648551
rplC BP3613 50S ribosomal protein L3chromosome CDS3830532 645 + 0.654264
rplD BP3614 50S ribosomal protein L4chromosome CDS3831181 618 + 0.613269
rplE BP3628 50S ribosomal protein L5chromosome CDS3839394 540 + 0.57963
rplF BP3631 50S ribosomal protein L6chromosome CDS3840668 534 + 0.595506
rplI BP2793 50s ribosomal protein l9chromosome CDS2968682 456 - 0.653509
rplJ BP0013 50S ribosomal protein L10chromosome CDS10513 525 + 0.611429
rplK BP0010 50S ribosomal protein L11chromosome CDS9138 432 + 0.631944
rplL BP0014 50S ribosomal protein L7/L12chromosome CDS11119 384 + 0.627604
rplM BP2962 50s ribosomal protein L13chromosome CDS3149562 429 - 0.58042
rplN BP3626 50S ribosomal protein L14chromosome CDS3838682 369 + 0.604336
rplO BP3635 50S ribosomal protein L15chromosome CDS3842324 441 + 0.659864
rplP BP3620 50S ribosomal protein L16chromosome CDS3834344 417 + 0.633094
rplR BP3632 50S ribosomal protein L18chromosome CDS3841223 363 + 0.644628
rplS BP0975 50S ribosomal protein L19chromosome CDS1014192 381 + 0.611549
rplT BP2575 50s ribosomal proteinchromosome CDS2727976 360 - 0.644444
rplU BP0749 50S ribosomal protein L21chromosome CDS761859 312 - 0.573718
rplV BP3618 50S ribosomal protein L22chromosome CDS3833211 330 + 0.572727
rplW BP3615 50S ribosomal protein L23chromosome CDS3831795 297 + 0.569024
rplX BP3627 50S ribosomal protein L24chromosome CDS3839061 321 + 0.629283
rplY BP3124 50S ribosomal protein L25chromosome CDS3328699 627 - 0.637959
rpmA BP0748 50S ribosomal protein L27chromosome CDS761565 261 - 0.639847
rpmB BP2051 50S ribosomal protein L28chromosome CDS2170164 237 - 0.628692
rpmC BP3621 50S ribosomal protein L29chromosome CDS3834771 192 + 0.604167
rpmD BP3634 50S ribosomal protein L30chromosome CDS3842129 186 + 0.623656
rpmF BP2445 50s ribosomal protein l32chromosome CDS2586958 183 - 0.590164
rpmG BP2050 50S ribosomal protein L33chromosome CDS2169933 168 - 0.505952
rpmH BP0492 50S ribosomal protein L34chromosome CDS506378 135 + 0.651852
rpmI BP2576 50s ribosomal protein l35chromosome CDS2728351 198 - 0.565657
rpmJ BP3638 50S ribosomal protein l36chromosome CDS3844367 114 + 0.535088
rpsA BP0950 30S ribosomal protein S1chromosome CDS988745 1731 + 0.630271
rpsB BP1419 30S ribosomal protein S2chromosome CDS1494211 750 + 0.624
rpsC BP3619 30S ribosomal protein S3chromosome CDS3833550 792 + 0.635101
rpsD BP3641 30S ribosomal protein S4chromosome CDS3845316 624 + 0.633013
rpsE BP3633 30S ribosomal protein S5chromosome CDS3841601 525 + 0.619048
rpsF BP2796 30s ribosomal protein s6chromosome CDS2969889 381 - 0.624672
rpsG BP3609 30S ribosomal protein S7chromosome CDS3825897 471 + 0.598726
rpsH BP3630 30S ribosomal protein S8chromosome CDS3840262 396 + 0.606061
rpsI BP2961 30s ribosomal protein S9chromosome CDS3149160 393 - 0.620865
rpsJ BP3612 30S ribosomal protein S10chromosome CDS3829818 312 + 0.602564
rpsK BP3640 30S ribosomal protein S11chromosome CDS3844903 402 + 0.636816
rpsL BP3608 30S ribosomal protein S12chromosome CDS3825356 378 + 0.608466
rpsM BP3639 30S ribosomal protein S13chromosome CDS3844522 366 + 0.625683
rpsN BP3629 30S ribosomal protein S14chromosome CDS3839946 306 + 0.591503
rpsO BP0794 30S ribosomal protein S15chromosome CDS816294 270 + 0.566667
rpsP BP1839 30S ribosomal protein S16chromosome CDS1931463 261 + 0.624521
rpsQ BP3622 30S ribosomal protein S17chromosome CDS3834964 282 + 0.578014
rpsR BP2794 30s ribosomal protein s18chromosome CDS2969153 273 - 0.582418
rpsS BP3617 30S ribosomal protein S19chromosome CDS3832932 276 + 0.572464
rpsU BP2186 30S ribosomal protein S21chromosome CDS2307472 213 - 0.610329
rpst BP2773 30s ribosomal protein s20chromosome CDS2949577 264 + 0.621212
rrmJ BP1078 ribosomal RNA large subunit methyltransferase jchromosome CDS1128016 633 - 0.652449
tgt BP1049 queuine tRNA-ribosyltransferasechromosome CDS1091874 1137 - 0.681618
thrS BP1497 threonyl-tRNA synthetasechromosome CDS1574769 1950 + 0.611795
trmD BP1841 tRNA (guanine-N1)-methyltransferasechromosome CDS1932512 774 + 0.715762
trmU BP2893 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS3068633 1116 - 0.682796
trpS BP1143 tryptophanyl-tRNA synthetasechromosome CDS1206090 1356 + 0.677729
truA BP1486 tRNA pseudouridine synthase Achromosome CDS1564046 813 + 0.688807
truB BP1249 tRNA pseudouridine synthase Bchromosome CDS1314460 735 + 0.672109
tsf BP1420 elongation factor Tschromosome CDS1495144 879 + 0.631399
tuf BP3611 elongation factor Tuchromosome CDS3828564 1191 + 0.626364
tufA BP0007 elongation factor Tuchromosome CDS6722 1191 + 0.626364
tyrS BP2954 tyrosyl-tRNA synthetasechromosome CDS3141499 1230 - 0.662602
valS BP2203 valyl-tRNA synthetasechromosome CDS2324418 2883 + 0.66736