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2024-05-02 10:22:07

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Mycoplasma mycoides subsp. mycoides SC str. PG1, PG1

Number of genes found: 115

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Mycoplasma mycoides subsp. mycoides SC str. PG1, PG1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MSC_0574 Conserved hypothetical proteinchromosome CDS646625 717 - 0.292887
NA MSC_0350 Conserved hypothetical proteinchromosome CDS399265 300 - 0.22
NA MSC_1034 Hypothetical proteinchromosome CDS1177878 363 + 0.236915
NA MSC_0914 GTP-BINDING PROTEINchromosome CDS1037875 1095 + 0.268493
NA MSC_0068 Transcriptional regulator (involved in nitrogen regulation; NifR3 familychromosome CDS77429 975 + 0.285128
NA MSC_0539 Conserved hypothetical proteinchromosome CDS613195 1827 + 0.229338
NA MSC_0561 Conserved hypothetical proteinchromosome CDS635940 315 - 0.228571
NA MSC_0795 translation initiation inhibitorchromosome CDS896181 402 + 0.251244
NA MSC_0807 translation initiation inhibitorchromosome CDS912120 402 + 0.251244
NA MSC_0153 conserved hypothetical proteinchromosome CDS177091 501 + 0.195609
alaS MSC_0178 alanine-tRNA ligasechromosome CDS207226 2691 - 0.242289
argS MSC_0599 arginine-tRNA ligasechromosome CDS679945 1665 - 0.236637
asnS MSC_0080 asparagine-tRNA ligasechromosome CDS98313 1359 - 0.281825
aspS MSC_0333 aspartate-tRNA ligasechromosome CDS381862 1725 - 0.242899
aspS MSC_0432 Aspartate-tRNA ligasechromosome CDS486528 303 - 0.280528
codA MSC_0049 CYTOSINE DEAMINASEchromosome CDS59379 468 - 0.205128
cysS MSC_0959 cysteine-tRNA ligasechromosome CDS1087858 1326 + 0.20362
deaD MSC_0469 ATP-dependent RNA helicasechromosome CDS531597 1362 + 0.202643
efp MSC_0451 Elongation factor Pchromosome CDS506544 555 + 0.299099
fmt MSC_0450 methionyl-tRNA formyltransferasechromosome CDS505504 954 + 0.234801
frr MSC_0600 ribosome recycling factorchromosome CDS681611 549 - 0.256831
fusA MSC_0159 Translation elongation factor Gchromosome CDS182205 2070 + 0.32029
gatA MSC_0762 glutamyl-tRNA (Gln) amidotransferase subunit Achromosome CDS857654 1458 - 0.262689
gatB MSC_0761 glutamyl-tRNA (Gln) amidotransferase subunit Bchromosome CDS856213 1473 - 0.232858
gatC MSC_0763 Glutamyl-tRNA (Gln) amidotransferase, subunit Cchromosome CDS859111 297 - 0.259259
gid MSC_0494 glucose inhibited division proteinchromosome CDS559984 1317 + 0.247532
gidA MSC_0375 glucose-inhibited division proteinchromosome CDS426682 1275 - 0.192941
gltX MSC_0131 glutamate-tRNA ligasechromosome CDS153850 1452 + 0.232094
glyS MSC_0464 glycine-tRNA ligasechromosome CDS525382 1371 + 0.2531
hemK MSC_0151 protoporphyrinogen oxidasechromosome CDS174753 849 + 0.183746
hisS MSC_0334 histidine-tRNA ligasechromosome CDS383595 1245 - 0.226506
hlyA MSC_0099 hemolysin Achromosome CDS119428 450 - 0.235556
ileS MSC_0585 isoleucine-tRNA ligasechromosome CDS656716 2748 - 0.235808
infB MSC_0349 translation initiation factor IF-2chromosome CDS397381 1863 - 0.275899
infC MSC_0221 translation initiation factor IF-3chromosome CDS254049 546 + 0.267399
ksgA MSC_0004 Dimethyladenosine transferase KsgAchromosome CDS3299 801 + 0.207241
leuS MSC_0709 leucine-tRNA ligasechromosome CDS811724 2433 - 0.261406
lpp MSC_1058 Putative variable prolipoproteinchromosome CDS1201579 426 + 0.253521
lysS MSC_0069 Lysine-tRNA ligasechromosome CDS78406 1503 + 0.273453
map MSC_0724 methionyl aminopeptidasechromosome CDS831160 756 - 0.292328
metS MSC_0012 Methionine-tRNA ligasechromosome CDS17078 1530 - 0.232026
pdf MSC_0220 Peptide deformylasechromosome CDS253257 603 + 0.232172
pheS MSC_0596 Phenylalanine-tRNA ligase alpha subunitchromosome CDS668635 1053 - 0.220323
prfA MSC_0150 peptide chain release factor 1chromosome CDS173666 1095 + 0.287671
proS MSC_0327 proline-tRNA ligasechromosome CDS374354 1425 + 0.244912
pth MSC_0954 Peptidyl-tRNA hydrolasechromosome CDS1082969 561 + 0.196078
rbfA MSC_0335 Ribosome-binding factor Achromosome CDS385024 354 + 0.223164
rimM MSC_0426 16S RRNA PROCESSING PROTEIN RIMMchromosome CDS481354 489 + 0.177914
rluB MSC_0387 Ribosomal large subunit pseudouridine synthase Bchromosome CDS439673 342 + 0.233918
rluC MSC_0766 RNA pseudouridylate synthasechromosome CDS863443 909 - 0.190319
rluD MSC_0583 ribosomal large subunit pseudouridylate synthase Dchromosome CDS655204 933 - 0.239014
rnpA MSC_1067 Ribonuclease P (protein C5)chromosome CDS1211028 330 - 0.178788
rplA MSC_0995 50S ribosomal protein L1chromosome CDS1133962 681 + 0.286344
rplB MSC_0742 50S RIBOSOMAL PROTEIN L2chromosome CDS840656 849 - 0.328622
rplC MSC_0745 50S RIBOSOMAL PROTEIN L3chromosome CDS842482 672 - 0.316964
rplD MSC_0744 50S RIBOSOMAL PROTEIN L4chromosome CDS841843 627 - 0.298246
rplE MSC_0732 50S RIBOSOMAL PROTEIN L5chromosome CDS836916 543 - 0.27256
rplF MSC_0730 50S RIBOSOMAL PROTEIN L6chromosome CDS835747 543 - 0.28361
rplI MSC_0955 50S ribosomal protein L9chromosome CDS1083641 471 + 0.225053
rplJ MSC_1006 50S RIBOSOMAL PROTEIN L10chromosome CDS1144562 498 + 0.309237
rplK MSC_0994 50S Ribosomal protein L11chromosome CDS1133534 429 + 0.321678
rplL MSC_1007 50S ribosomal protein L7/L12chromosome CDS1145128 369 + 0.336043
rplM MSC_0713 50S RIBOSOMAL PROTEIN L13chromosome CDS817786 456 - 0.296053
rplN MSC_0735 50S RIBOSOMAL PROTEIN L14chromosome CDS837817 369 - 0.330623
rplO MSC_0727 50S RIBOSOMAL PROTEIN L15chromosome CDS834132 438 - 0.305936
rplP MSC_0738 50S RIBOSOMAL PROTEIN L16chromosome CDS838874 414 - 0.335749
rplQ MSC_0720 50S ribosomal protein L17chromosome CDS828589 360 - 0.297222
rplR MSC_0729 50S RIBOSOMAL PROTEIN L18chromosome CDS835371 351 - 0.279202
rplS MSC_0428 50S RIBOSOMAL PROTEIN L19chromosome CDS482568 393 + 0.272265
rplT MSC_0223 50S ribosomal protein L20chromosome CDS254830 366 + 0.270492
rplU MSC_0562 50S ribosomal protein L21chromosome CDS636257 303 - 0.264026
rplV MSC_0740 50S RIBOSOMAL PROTEIN L22chromosome CDS840009 336 - 0.28869
rplW MSC_0743 50S RIBOSOMAL PROTEIN L23chromosome CDS841559 285 - 0.25614
rplX MSC_0734 50S RIBOSOMAL PROTEIN L24chromosome CDS837477 327 - 0.281346
rpmA MSC_0560 50S RIBOSOMAL PROTEI L27chromosome CDS635657 282 - 0.312057
rpmB MSC_0483 50S RIBOSOMAL PROTEIN L28chromosome CDS549831 207 + 0.289855
rpmC MSC_0737 50S RIBOSOMAL PROTEIN L29chromosome CDS838458 417 - 0.294964
rpmF MSC_0593 50S ribosomal protein L32chromosome CDS665530 180 - 0.316667
rpmH MSC_1068 50S RIBOSOMAL PROTEIN L34chromosome CDS1211364 171 - 0.327485
rpmI MSC_0222 50S ribosomal protein L35chromosome CDS254620 192 + 0.296875
rpme MSC_0146 50S ribosomal protein L31chromosome CDS169823 279 + 0.301075
rpsB MSC_0608 30S ribosomal protein S2chromosome CDS690847 387 - 0.245478
rpsC MSC_0739 30S RIBOSOMAL PROTEIN S3chromosome CDS839290 702 - 0.293447
rpsD MSC_0278 30S ribosomal protein S4chromosome CDS316961 627 - 0.266348
rpsE MSC_0728 30S ribosomal protein S5chromosome CDS834588 765 - 0.303268
rpsF MSC_0027 30S ribosomal protein S6chromosome CDS30877 414 - 0.246377
rpsG MSC_0158 30S ribosomal protein S7chromosome CDS181713 468 + 0.273504
rpsH MSC_0731 Ribosomal protein S8chromosome CDS836303 486 - 0.304527
rpsI MSC_0712 30S RIBOSOMAL PROTEIN S9chromosome CDS817388 399 - 0.325815
rpsJ MSC_0746 30S RIBOSOMAL PROTEIN S10chromosome CDS843229 309 - 0.320388
rpsK MSC_0722 30S RIBOSOMAL PROTEIN S11chromosome CDS829925 390 - 0.364103
rpsL MSC_0157 30S ribosomal protein S12chromosome CDS181189 438 + 0.351598
rpsM MSC_0723 30S RIBOSOMAL PROTEIN S13chromosome CDS830340 366 - 0.295082
rpsO MSC_0347 30S ribosomal protein S15chromosome CDS396220 267 + 0.250936
rpsP MSC_0425 30S RIBOSOMAL PROTEIN S16chromosome CDS481010 327 + 0.253823
rpsQ MSC_0736 30S RIBOSOMAL PROTEIN S17chromosome CDS838201 258 - 0.25969
rpsR MSC_0025 30S ribosomal protein S18chromosome CDS30178 228 - 0.25
rpsS MSC_0741 30S RIBOSOMAL PROTEIN S19chromosome CDS840368 267 - 0.310861
rpsT MSC_0086 30S ribosomal protein S20chromosome CDS104566 300 - 0.25
rpsU MSC_0541 30S ribosomal protein S21chromosome CDS615870 183 + 0.295082
serS MSC_0066 Serine-tRNA ligasechromosome CDS75743 1269 + 0.256107
spoU MSC_0508 rRNA methylasechromosome CDS576339 768 + 0.25651
spoU MSC_0615 rRNA Methylase (Spou-family)chromosome CDS699253 546 - 0.250916
spoU MSC_0960 rRNA Methylasechromosome CDS1089185 735 + 0.209524
sun MSC_0217 Sun family proteinchromosome CDS250469 1299 - 0.197075
thrS MSC_0262 threonine-tRNA ligasechromosome CDS298293 1920 + 0.238542
trmD MSC_0427 tRNA (guanine-N1)-methyltransferasechromosome CDS481844 723 + 0.24343
trmU MSC_0447 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS501506 1128 + 0.230496
trpS MSC_0358 tryptophan-tRNA ligasechromosome CDS409750 1011 + 0.248269
truA MSC_0715 pseudouridylate synthase Ichromosome CDS822611 756 - 0.21164
truB MSC_0336 tRNA pseudouridine synthase Bchromosome CDS385427 879 + 0.201365
tsf MSC_0607 Elongation factor TSchromosome CDS689457 888 - 0.268018
tufA MSC_0160 translation elongation factor Tuchromosome CDS184406 1188 + 0.357744
tyrS MSC_0686 tyrosine-tRNA ligasechromosome CDS789488 1245 - 0.234538
valS MSC_0303 valine-tRNA ligasechromosome CDS344889 2619 - 0.221077