Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Candidatus Blochmannia floridanus
Number of genes found: 115
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Candidatus Blochmannia floridanus | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
alaS | Bfl168 | alanyl-tRNA synthetase | chromosome | CDS | 201467 | 2676 | + | 0.269058 |
argS | Bfl453 | arginyl-tRNA synthetase | chromosome | CDS | 499941 | 1752 | + | 0.261986 |
asnS | Bfl421 | asparaginyl-tRNA synthetase | chromosome | CDS | 459061 | 1413 | + | 0.279547 |
aspS | Bfl452 | aspartyl-tRNA synthetase | chromosome | CDS | 497781 | 1731 | - | 0.294627 |
cca | Bfl062 | tRNA nucleotidyltransferase | chromosome | CDS | 66776 | 1236 | - | 0.305825 |
cysS | Bfl304 | cysteinyl-tRNA synthetase | chromosome | CDS | 336243 | 1425 | + | 0.271579 |
deaD | Bfl109 | Cold-shock DEAD-box protein A, inducible ATP-independent RNA helicase | chromosome | CDS | 119755 | 1464 | + | 0.28347 |
def | Bfl219 | polypeptide deformylase | chromosome | CDS | 236304 | 528 | - | 0.282197 |
efp | Bfl072 | elongation factor P (EF-P) | chromosome | CDS | 76578 | 564 | + | 0.287234 |
fmt | Bfl218 | methionyl-tRNA formyltransferase | chromosome | CDS | 235306 | 972 | - | 0.277778 |
frr | Bfl274 | ribosome recycling factor | chromosome | CDS | 298800 | 567 | + | 0.252205 |
ftsJ | Bfl097 | cell division protein 23S rRNA methyltransferase FtsJ | chromosome | CDS | 105196 | 621 | + | 0.302738 |
fusA | Bfl565 | elongation factor G (EF-G) | chromosome | CDS | 633743 | 2130 | - | 0.338967 |
glnS | Bfl324 | glutaminyl-tRNA synthetase | chromosome | CDS | 356593 | 1671 | + | 0.278276 |
gltX | Bfl504 | glutamyl-tRNA synthetase | chromosome | CDS | 560267 | 1452 | - | 0.283058 |
glyQ | Bfl020 | glycine-tRNA synthetase, alpha subunit | chromosome | CDS | 20794 | 906 | + | 0.277042 |
glyS | Bfl021 | glycine-tRNA synthetase, beta subunit | chromosome | CDS | 21725 | 1986 | + | 0.259315 |
hemK | Bfl349 | putative protoporphyrinogen oxidase | chromosome | CDS | 385928 | 846 | + | 0.277778 |
hisS | Bfl531 | histidyl-tRNA synthetase | chromosome | CDS | 592107 | 1302 | - | 0.290323 |
ileS | Bfl118 | isoleucyl-tRNA synthetase | chromosome | CDS | 132130 | 2862 | + | 0.273235 |
infA | Bfl388 | initiation factor IF-1 | chromosome | CDS | 428649 | 219 | + | 0.296804 |
infB | Bfl104 | protein chain initiation factor 2 | chromosome | CDS | 112933 | 2694 | + | 0.302153 |
infC | Bfl352 | translation initiation factor IF-3 | chromosome | CDS | 389909 | 528 | + | 0.257576 |
ksgA | Bfl126 | dimethyladenosine transferase | chromosome | CDS | 143554 | 816 | - | 0.262255 |
leuS | Bfl313 | leucyl-tRNA synthetase | chromosome | CDS | 345309 | 2604 | - | 0.286482 |
lysS | Bfl262 | lysyl-tRNA synthetase | chromosome | CDS | 280221 | 1458 | + | 0.277778 |
map | Bfl270 | methionine aminopeptidase | chromosome | CDS | 295222 | 795 | - | 0.308176 |
metG | Bfl471 | methionyl-tRNA synthetase | chromosome | CDS | 518883 | 1638 | + | 0.259463 |
miaA | Bfl079 | tRNA delta-2-isopentenylpyrophosphate (IPP) transferase | chromosome | CDS | 84768 | 972 | + | 0.290123 |
pheS | Bfl355 | phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 391286 | 1008 | + | 0.251984 |
pnp | Bfl108 | polynucleotide phosphorylase, member of mRNA degradosome | chromosome | CDS | 117421 | 2094 | + | 0.333333 |
prfA | Bfl348 | peptide chain release factor 1 (RF-1) | chromosome | CDS | 384855 | 1077 | + | 0.286908 |
prfB | Bfl261 | peptide chain release factor 2 (RF-2) | chromosome | CDS | 279048 | 1098 | + | 0.290528 |
proS | Bfl289 | prolyl-tRNA synthetase | chromosome | CDS | 317588 | 1746 | - | 0.256586 |
pth | Bfl345 | peptidyl-tRNA hydrolase | chromosome | CDS | 381583 | 594 | - | 0.239057 |
queA | Bfl229 | S-adenosylmethionine:tRNAribosyltransferase-isom erase | chromosome | CDS | 242932 | 1062 | + | 0.274011 |
rbfA | Bfl105 | ribosome-binding factor A (P15B protein) | chromosome | CDS | 115697 | 354 | + | 0.274011 |
rimM | Bfl174 | 16S rRNA processing protein | chromosome | CDS | 206757 | 558 | + | 0.250896 |
rluC | Bfl409 | ribosomal large subunit pseudouridine synthase C | chromosome | CDS | 449348 | 969 | - | 0.280702 |
rluD | Bfl181 | pseudouridine synthase (pseudouridines 1911, 1915, 1917 in 23S RNA) | chromosome | CDS | 213012 | 966 | + | 0.281574 |
rne | Bfl410 | ribonuclease E | chromosome | CDS | 450736 | 2133 | + | 0.277543 |
rnpA | Bfl014 | RNase P, protein component | chromosome | CDS | 13964 | 363 | - | 0.242424 |
rplA | Bfl560 | 50S ribosomal subunit protein L1 | chromosome | CDS | 630131 | 708 | - | 0.295198 |
rplB | Bfl194 | 50S ribosomal subunit protein L2 | chromosome | CDS | 223151 | 831 | + | 0.354994 |
rplC | Bfl191 | 50S ribosomal subunit protein L3 | chromosome | CDS | 221527 | 660 | + | 0.322727 |
rplD | Bfl192 | 50S ribosomal subunit protein L4 | chromosome | CDS | 222183 | 639 | + | 0.29108 |
rplE | Bfl203 | 50S ribosomal subunit protein L5 | chromosome | CDS | 227197 | 573 | + | 0.298429 |
rplF | Bfl206 | 50S ribosomal subunit protein L6 | chromosome | CDS | 228550 | 546 | + | 0.294872 |
rplI | Bfl087 | 50S ribosomal subunit protein L9 | chromosome | CDS | 93152 | 486 | + | 0.271605 |
rplJ | Bfl559 | 50S ribosomal subunit protein L10 | chromosome | CDS | 629316 | 498 | - | 0.271084 |
rplK | Bfl561 | 50S ribosomal subunit protein L11 | chromosome | CDS | 630835 | 441 | - | 0.315193 |
rplL | Bfl558 | 50S ribosomal subunit protein L7/L12 | chromosome | CDS | 628841 | 381 | - | 0.333333 |
rplM | Bfl049 | 50S ribosomal subunit protein L13 | chromosome | CDS | 55306 | 420 | + | 0.280952 |
rplN | Bfl201 | 50S ribosomal subunit protein L14 | chromosome | CDS | 226450 | 372 | + | 0.336022 |
rplO | Bfl210 | 50S ribosomal subunit protein L15 | chromosome | CDS | 230238 | 444 | + | 0.326577 |
rplP | Bfl198 | 50S ribosomal subunit protein L16 | chromosome | CDS | 225456 | 402 | + | 0.348259 |
rplQ | Bfl217 | 50S ribosomal subunit protein L17 | chromosome | CDS | 234854 | 378 | + | 0.267196 |
rplR | Bfl207 | 50S ribosomal subunit protein L18 | chromosome | CDS | 229150 | 354 | + | 0.316384 |
rplS | Bfl176 | 50S ribosomal subunit protein L19 | chromosome | CDS | 208123 | 354 | + | 0.276836 |
rplT | Bfl354 | 50S ribosomal subunit protein L20 | chromosome | CDS | 390826 | 357 | + | 0.305322 |
rplU | Bfl093 | 50S ribosomal subunit protein L21 | chromosome | CDS | 102286 | 384 | + | 0.278646 |
rplV | Bfl196 | 50S ribosomal subunit protein L22 | chromosome | CDS | 224342 | 330 | + | 0.29697 |
rplW | Bfl193 | 50S ribosomal subunit protein L23 | chromosome | CDS | 222830 | 300 | + | 0.27 |
rplX | Bfl202 | 50S ribosomal subunit protein L24 | chromosome | CDS | 226853 | 321 | + | 0.292835 |
rplY | Bfl473 | 50s ribosomal protein L25 | chromosome | CDS | 521617 | 312 | + | 0.266026 |
rpmA | Bfl094 | 50S ribosomal subunit protein L27 | chromosome | CDS | 102659 | 258 | + | 0.341085 |
rpmB | Bfl612 | 50S ribosomal subunit protein L28 | chromosome | CDS | 679697 | 240 | - | 0.245833 |
rpmC | Bfl199 | 50S ribosomal subunit protein L29 | chromosome | CDS | 225862 | 201 | + | 0.199005 |
rpmD | Bfl209 | 50S ribosomal subunit protein L30 | chromosome | CDS | 230055 | 177 | + | 0.333333 |
rpmE | Bfl599 | 50S ribosomal protein L31 | chromosome | CDS | 667500 | 222 | - | 0.297297 |
rpmF | Bfl408 | 50S ribosomal protein L32 | chromosome | CDS | 448730 | 171 | - | 0.292398 |
rpmG | Bfl611 | 50S ribosomal subunit protein L33 | chromosome | CDS | 679527 | 162 | - | 0.228395 |
rpmH | Bfl015 | 50s ribosomal protein l34 | chromosome | CDS | 14374 | 141 | - | 0.35461 |
rpmI | Bfl353 | 50S ribosomal subunit protein L35 | chromosome | CDS | 390531 | 198 | + | 0.262626 |
rpmJ | Bfl212 | 50S ribosomal subunit protein L36 | chromosome | CDS | 232091 | 117 | + | 0.34188 |
rpsA | Bfl380 | 30S ribosomal protein S1 | chromosome | CDS | 416978 | 1728 | - | 0.302662 |
rpsB | Bfl271 | 30S ribosomal protein S2 | chromosome | CDS | 296283 | 696 | + | 0.303161 |
rpsC | Bfl197 | 30S ribosomal subunit protein S3 | chromosome | CDS | 224731 | 708 | + | 0.337571 |
rpsD | Bfl215 | 30S ribosomal subunit protein S4 | chromosome | CDS | 233135 | 624 | + | 0.3125 |
rpsE | Bfl208 | 30S ribosomal subunit protein S5 | chromosome | CDS | 229516 | 534 | + | 0.359551 |
rpsF | Bfl085 | 30S ribosomal subunit protein S6 | chromosome | CDS | 92399 | 363 | + | 0.236915 |
rpsG | Bfl566 | 30S ribosomal subunit protein S7 | chromosome | CDS | 635980 | 474 | - | 0.362869 |
rpsH | Bfl205 | 30S ribosomal subunit protein S8 | chromosome | CDS | 228132 | 396 | + | 0.30303 |
rpsI | Bfl050 | 30S ribosomal subunit protein S9 | chromosome | CDS | 55796 | 393 | + | 0.335878 |
rpsJ | Bfl190 | 30S ribosomal subunit protein S10 | chromosome | CDS | 221115 | 312 | + | 0.349359 |
rpsK | Bfl214 | 30S ribosomal subunit protein S11 | chromosome | CDS | 232707 | 393 | + | 0.391858 |
rpsL | Bfl567 | 30S ribosomal subunit protein S12 | chromosome | CDS | 636601 | 375 | - | 0.376 |
rpsM | Bfl213 | 30S ribosomal subunit protein S13 | chromosome | CDS | 232287 | 357 | + | 0.336134 |
rpsN | Bfl204 | 30S ribosomal subunit protein S14 | chromosome | CDS | 227775 | 306 | + | 0.352941 |
rpsO | Bfl107 | 30S ribosomal subunit protein S15 | chromosome | CDS | 116984 | 273 | + | 0.25641 |
rpsP | Bfl173 | 30S ribosomal subunit protein S16 | chromosome | CDS | 206462 | 249 | + | 0.305221 |
rpsQ | Bfl200 | 30S ribosomal subunit protein S17 | chromosome | CDS | 226109 | 258 | + | 0.251938 |
rpsR | Bfl086 | 30S ribosomal subunit protein S18 | chromosome | CDS | 92839 | 237 | + | 0.320675 |
rpsS | Bfl195 | 30S ribosomal subunit protein S19 | chromosome | CDS | 224008 | 282 | + | 0.336879 |
rpsT | Bfl116 | 30S ribosomal protein S20 | chromosome | CDS | 130753 | 267 | - | 0.258427 |
rpsU | Bfl058 | 30S ribosomal subunit protein S21 | chromosome | CDS | 63622 | 216 | - | 0.282407 |
serS | Bfl384 | seryl-tRNA synthetase | chromosome | CDS | 422339 | 1311 | - | 0.279939 |
smpA | Bfl546 | small membrane protein A | chromosome | CDS | 609173 | 348 | + | 0.235632 |
tgt | Bfl230 | queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase | chromosome | CDS | 244122 | 1137 | + | 0.306948 |
thrS | Bfl351 | threonyl-tRNA synthetase | chromosome | CDS | 388653 | 1233 | + | 0.274939 |
trmD | Bfl175 | tRNA(guanine-N1)methyltransferase | chromosome | CDS | 207348 | 747 | + | 0.30656 |
trmU | Bfl392 | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | chromosome | CDS | 433593 | 1110 | + | 0.286486 |
trpS | Bfl569 | tryptophanyl-tRNA synthetase | chromosome | CDS | 638471 | 1005 | - | 0.291542 |
truA | Bfl496 | tRNA pseudouridine synthase A | chromosome | CDS | 550522 | 759 | - | 0.328063 |
truB | Bfl106 | tRNA pseudouridine 5S synthase | chromosome | CDS | 116087 | 768 | + | 0.268229 |
tsf | Bfl272 | elongation factor Ts (EF-Ts) | chromosome | CDS | 297058 | 810 | + | 0.271605 |
tuf | Bfl564 | elongation factor Tu (EF-Tu) | chromosome | CDS | 632459 | 1185 | - | 0.36962 |
tyrS | Bfl371 | tyrosyl-tRNA synthetase | chromosome | CDS | 406416 | 1269 | + | 0.252167 |
valS | Bfl033 | valyl-tRNA synthetase | chromosome | CDS | 38360 | 2901 | - | 0.261979 |
ychF | Bfl344 | putative ATP/GTP-binding protein | chromosome | CDS | 380411 | 1047 | - | 0.243553 |
yfcB | Bfl499 | conserved hypothetical protein | chromosome | CDS | 554680 | 912 | + | 0.29386 |
yfhC | Bfl537 | putative cytosine/adenosine deaminase | chromosome | CDS | 600704 | 480 | - | 0.308333 |
yjfH | Bfl084 | probable tRNA/rRNA methyltransferase | chromosome | CDS | 91405 | 765 | + | 0.308497 |
yjgF | Bfl031 | putative translation initiation inhibitor | chromosome | CDS | 36578 | 417 | - | 0.2494 |
yrdC | Bfl220 | conserved hypothetical protein | chromosome | CDS | 237099 | 570 | + | 0.317544 |