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2024-05-03 09:58:28

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Corynebacterium diphtheriae NCTC 13129, NCTC 13129

Number of genes found: 153

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Corynebacterium diphtheriae NCTC 13129, NCTC 13129
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DIP0897 Putative peptidyl tRNA hydrolasechromosome CDS867987 543 - 0.558011
NA DIP2277 Conserved hypothetical proteinchromosome CDS2368117 1050 + 0.591429
NA DIP0975 Putative RNA pseudouridylate synthase family proteinchromosome CDS946181 732 + 0.569672
NA DIP1004 Conserved hypothetical proteinchromosome CDS977878 831 - 0.534296
NA DIP1411 Putative transferasechromosome CDS1428054 1536 + 0.489583
NA DIP1177 Conserved hypothetical proteinchromosome CDS1175639 1077 + 0.506964
NA DIP0247 Putative cytosine deaminasechromosome CDS209792 444 + 0.657658
NA DIP1323 Putative peptide deformylasechromosome CDS1334975 510 - 0.464706
NA DIP0651 Conserved hypothetical proteinchromosome CDS626082 1059 + 0.556185
NA DIP0781 Putative methyltransferasechromosome CDS760677 897 + 0.552954
NA DIP1576 Putative RNA-binding heat shock proteinchromosome CDS1603691 378 - 0.560847
NA DIP1860 acetyltransferase (GNAT) family proteinchromosome CDS1903657 528 + 0.49053
NA DIP1587 Putative L-asparaginasechromosome CDS1614825 921 + 0.541802
NA DIP1249 Conserved hypothetical proteinchromosome CDS1252639 837 - 0.51374
NA DIP0901 Putative 50S ribosomal protein L25chromosome CDS870759 618 - 0.561489
NA DIP1448 Conserved hypothetical proteinchromosome CDS1467450 1551 - 0.489362
NA DIP0900 Putative peptidyl tRNA hydrolasechromosome CDS870146 555 - 0.495495
NA DIP0240 Hypothetical proteinchromosome CDS205903 408 - 0.656863
NA DIP2096 Putative RNA methylase family proteinchromosome CDS2147125 519 - 0.587669
NA DIP2138 Putative integral membrane protein/lysyl-tRNA synthetase fusionchromosome CDS2202940 3150 + 0.579365
NA DIP1970 SpoU rRNA Methylase family proteinchromosome CDS2017931 942 - 0.604034
NA DIP0698 Conserved hypothetical proteinchromosome CDS673384 669 + 0.541106
NA DIP1180 Putative cytotoxin/hemolysinchromosome CDS1177969 822 + 0.485401
NA DIP0343 Hypothetical proteinchromosome CDS308897 525 + 0.430476
NA DIP1398 Conserved hypothetical proteinchromosome CDS1416837 1263 - 0.480602
NA DIP1195 Putative pseudouridine synthase Bchromosome CDS1194036 966 + 0.512422
NA DIP0301 Conserved hypothetical proteinchromosome CDS269366 465 + 0.587097
NA DIP1240 Putative tRNA/rRNA methyltransferasechromosome CDS1243744 471 + 0.452229
NA DIP2247 Putative amidasechromosome CDS2336303 1206 + 0.596186
NA DIP1111 Putative integral membrane proteinchromosome CDS1094905 333 + 0.48048
NA DIP0682 Putative mannose-1-phosphate guanyltransferasechromosome CDS658206 1089 + 0.543618
NA DIP0252 Putative glutamyl-tRNA synthetasechromosome CDS215918 894 + 0.620805
NA DIP1212 Putative RNA helicasechromosome CDS1213407 1359 - 0.509198
NA DIP0875 Putative dimethyladenosine transferasechromosome CDS850103 888 + 0.558559
NA DIP1321 Conserved hypothetical proteinchromosome CDS1332549 1458 - 0.493141
NA DIP0158 Putative secreted proteinchromosome CDS129067 438 - 0.575342
NA DIP1782 Putative RNA-associated proteinchromosome CDS1824673 2889 - 0.56594
NA DIP2368 Putative tRNA nucleotidyltransferasechromosome CDS2470765 1488 - 0.5625
NA DIP0442 Putative membrane proteinchromosome CDS404738 1983 + 0.460918
NA DIP0186 Hypothetical proteinchromosome CDS159035 162 - 0.58642
NA DIP1043 Conserved hypothetical proteinchromosome CDS1025435 651 + 0.542243
NA DIP1903 Putative exported proteinchromosome CDS1958274 1152 + 0.609375
NA DIP0864 Putative acetyltransferasechromosome CDS836463 663 + 0.536953
NA DIP0948 Putative ABC transport system ATP-binding proteinchromosome CDS919766 1086 + 0.534991
NA DIP0251 Putative tRNA-ribosyltransferasechromosome CDS214616 1293 + 0.600928
NA DIP0895 Putative peptide chain release factor 3chromosome CDS865500 1635 - 0.549235
NA DIP1412 Conserved hypothetical proteinchromosome CDS1429600 438 + 0.513699
NA DIP0717 Putative ATP-dependent RNA helicasechromosome CDS688659 1311 - 0.559878
NA DIP1396 Putative ribonucleasechromosome CDS1413434 1224 + 0.484477
NA DIP0491 Putative secreted amino acid hydrolasechromosome CDS456732 1029 + 0.601555
NA DIP1614 Conserved hypothetical proteinchromosome CDS1646614 369 - 0.504065
NA DIP1042 HemK-family methytransferasechromosome CDS1024509 819 + 0.512821
alaS DIP1350 alanyl-tRNA synthetasechromosome CDS1362202 2667 - 0.491564
argS DIP1034 arginyl-tRNA synthetasechromosome CDS1013777 1653 + 0.523291
aspS DIP1353 aspartyl-tRNA synthetasechromosome CDS1367810 1806 - 0.507752
cysS1 DIP1971 Putative cysteinyl-tRNA synthetasechromosome CDS2018900 1392 - 0.584052
cysS2 DIP1261 cysteinyl-tRNA synthetasechromosome CDS1267559 1245 - 0.477912
deaD DIP1018 DEAD-box helicasechromosome CDS993506 2043 + 0.573177
def DIP2045 peptide deformylasechromosome CDS2092244 564 + 0.597518
efp DIP1340 elongation factor Pchromosome CDS1353483 564 - 0.503546
fmt DIP1322 methionyl-tRNA formyltransferasechromosome CDS1334003 936 - 0.497863
frr DIP1505 ribosome recycling factorchromosome CDS1529309 558 - 0.47491
fusA DIP0469 elongation factor Gchromosome CDS437925 2181 + 0.561669
gatA DIP1080 glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS1062018 1485 + 0.531313
gatB DIP1089 glutamyl-tRNA(Gln) amidotransferase subunit Bchromosome CDS1071435 1506 + 0.527888
gatC DIP1079 glutamyl-tRNA(Gln) amidotransferase subunit Cchromosome CDS1061719 300 + 0.546667
gltX DIP1115 glutamyl-tRNA synthetasechromosome CDS1097919 1494 + 0.524096
glyS DIP1708 glycyl-tRNA synthetasechromosome CDS1745608 1386 - 0.546176
gpsI DIP1467 guanosine pentaphosphate synthetase/ polyribonucleotide nucleotidyltransferasechromosome CDS1486307 2268 - 0.507496
hisS DIP1360 histidyl-tRNA synthetasechromosome CDS1378566 1272 - 0.519654
ileS DIP1589 isoleucyl-tRNA synthetasechromosome CDS1617227 3159 - 0.512187
infA DIP0545 translation initiation factor IF-1chromosome CDS516214 219 + 0.511416
infB DIP1477 translation initiation factor IF-2chromosome CDS1496519 2862 - 0.56464
infC DIP1160 translation initiation factor IF-3chromosome CDS1152383 504 + 0.531746
leuS DIP2320 leucyl-tRNA synthetasechromosome CDS2421946 2883 - 0.580298
lysU DIP1987 Putative lysyl-tRNA synthetasechromosome CDS2035873 1563 - 0.59373
mapA DIP0542 methionine aminopeptidasechromosome CDS511740 795 + 0.571069
mapB DIP1496 methionine aminopeptidasechromosome CDS1519142 885 - 0.479096
metG DIP0872 methionyl-tRNA synthetasechromosome CDS846041 1833 + 0.539007
miaA DIP1443 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1462348 909 - 0.484048
pheS DIP1165 phenylalanyl-tRNA synthetase alpha chainchromosome CDS1155546 1056 + 0.504735
prfA DIP1041 peptide chain release factor 1 (RF-1)chromosome CDS1023434 1071 + 0.539683
prfB DIP0746 peptide chain release factor 2chromosome CDS721938 1110 + 0.538739
proS DIP1482 prolyl-tRNA synthetasechromosome CDS1502667 1758 - 0.519909
rbfA DIP1476 Putative ribosome-binding factor Achromosome CDS1495936 444 - 0.495495
rimM DIP1531 Putative 16s rRNA processing proteinchromosome CDS1552581 501 - 0.47505
rluC DIP1583 Putative pseudouridine synthasechromosome CDS1611445 927 - 0.542611
rnpA DIP2381 Putative ribonuclease Pchromosome CDS2487177 360 - 0.572222
rph DIP1851 Putative ribonuclease PHchromosome CDS1895536 726 - 0.57989
rplA DIP0433 50S ribosomal protein L1chromosome CDS397269 708 + 0.518362
rplB DIP0476 50S ribosomal protein L2chromosome CDS444731 843 + 0.584816
rplC DIP0473 50S ribosomal protein L3chromosome CDS443098 657 + 0.585997
rplD DIP0474 50S ribosomal protein L4chromosome CDS443751 654 + 0.587156
rplE DIP0488 50S ribosomal protein L5chromosome CDS452643 564 + 0.567376
rplF DIP0525 50S ribosomal protein L6chromosome CDS494642 537 + 0.538175
rplI DIP2289 50S ribosomal protein L9chromosome CDS2386879 453 - 0.567329
rplJ DIP0436 50S ribosomal protein L10chromosome CDS399728 516 + 0.546512
rplK DIP0432 50S ribosomal protein L11chromosome CDS396774 429 + 0.55711
rplL DIP0437 50S ribosomal protein L7/L12chromosome CDS400287 381 + 0.538058
rplM DIP0561 50S ribosomal protein L13chromosome CDS531311 444 + 0.572072
rplN DIP0486 50S ribosomal protein L14chromosome CDS451955 369 + 0.550135
rplO DIP0529 50s ribosomal protein L15chromosome CDS496447 447 + 0.572707
rplP DIP0480 50S ribosomal protein L16chromosome CDS446984 417 + 0.549161
rplQ DIP0550 50S ribosomal protein L17chromosome CDS519202 474 + 0.563291
rplR DIP0526 50S ribosomal protein L18chromosome CDS495220 369 + 0.612466
rplS DIP1527 50S ribosomal protein L19chromosome CDS1548534 342 - 0.532164
rplT DIP1162 50S ribosomal protein L20chromosome CDS1153172 384 + 0.546875
rplU DIP1781 50S ribosomal protein L21chromosome CDS1824193 306 - 0.552288
rplV DIP0478 50S ribosomal protein L22chromosome CDS445872 363 + 0.597796
rplW DIP0475 50S ribosomal protein L23chromosome CDS444404 306 + 0.575163
rplX DIP0487 50S ribosomal protein L24chromosome CDS452326 315 + 0.549206
rpmA DIP1780 50S ribosomal protein L27chromosome CDS1823886 267 - 0.573034
rpmB2 DIP0851 50S ribosomal protein L28-2chromosome CDS826292 237 - 0.590717
rpmC DIP0481 50S ribosomal protein L29chromosome CDS447400 231 + 0.61039
rpmD DIP0528 50S ribosomal protein L30chromosome CDS496259 186 + 0.537634
rpmE DIP0852 50S ribosomal protein L31 type B-2chromosome CDS826998 267 + 0.543071
rpmF DIP0853 50S ribosomal protein L32chromosome CDS827283 174 + 0.545977
rpmG DIP0850 50S ribosomal protein L33 type 1chromosome CDS826124 165 - 0.521212
rpmH DIP2382 50S ribosomal protein L34chromosome CDS2487568 144 - 0.604167
rpmI DIP1161 50S ribosomal protein L35chromosome CDS1152916 195 + 0.584615
rpmJ DIP1872 50S ribosomal protein L36chromosome CDS1917063 123 - 0.552846
rpsA DIP1148 30S ribosomal protein S1chromosome CDS1133555 1461 + 0.572211
rpsB DIP1508 30S ribosomal protein S2chromosome CDS1531998 801 - 0.540574
rpsC DIP0479 30S ribosomal protein S3chromosome CDS446234 747 + 0.625167
rpsD DIP0548 30S ribosomal protein S4chromosome CDS517418 606 + 0.582508
rpsE DIP0527 30S ribosomal protein S5chromosome CDS495629 627 + 0.606061
rpsF DIP2291 30S ribosomal protein S6chromosome CDS2388168 297 - 0.545455
rpsG DIP0468 30S ribosomal protein S7chromosome CDS437259 468 + 0.559829
rpsH DIP0524 30S ribosomal protein S8chromosome CDS494228 399 + 0.561404
rpsI DIP0562 30S ribosomal protein S9chromosome CDS531751 534 + 0.597378
rpsJ DIP0472 30S ribosomal protein S10chromosome CDS442760 306 + 0.568627
rpsK DIP0547 30S ribosomal protein S11chromosome CDS516990 405 + 0.572839
rpsL DIP0467 30S ribosomal protein S12chromosome CDS436884 372 + 0.58871
rpsM DIP0546 30S ribosomal protein S13chromosome CDS516618 369 + 0.588076
rpsN DIP0849 30S ribosomal protein S14chromosome CDS825815 306 - 0.591503
rpsO DIP1468 30S ribosomal protein S15chromosome CDS1488766 270 - 0.548148
rpsP DIP1532 30S ribosomal protein S16chromosome CDS1553211 474 - 0.544304
rpsQ DIP0482 30S ribosomal protein S17chromosome CDS447633 279 + 0.541219
rpsR2 DIP0848 30S ribosomal protein S18-2chromosome CDS825552 249 - 0.578313
rpsS DIP0477 30S ribosomal protein S19chromosome CDS445590 279 + 0.55914
rpsT DIP1766 30S ribosomal protein S20chromosome CDS1812042 264 + 0.57197
serS DIP2240 seryl-tRNA synthetasechromosome CDS2329968 1260 - 0.58254
thrS DIP1388 threonyl-tRNA synthetasechromosome CDS1404545 2064 - 0.48595
trmD DIP1530 tRNA (guanine-N1)-methyltransferasechromosome CDS1551703 879 - 0.507395
trmU DIP1074 probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1055670 1101 + 0.524069
trpS DIP0635 tryptophanyl-tRNA synthetasechromosome CDS605642 1035 + 0.542029
truA DIP0551 tRNA pseudouridine synthase Achromosome CDS519770 888 + 0.582207
truB DIP1471 tRNA pseudouridine synthase Bchromosome CDS1491198 903 + 0.506091
tsf DIP1507 elongation factor TSchromosome CDS1530890 828 - 0.551932
tsnR DIP1164 Putative rRNA methyltransferasechromosome CDS1154597 819 + 0.4884
tuf DIP0470 Elongation factor Tuchromosome CDS440423 1191 + 0.575987
tyrS DIP1176 tyrosyl-tRNA synthetasechromosome CDS1168427 1263 + 0.469517
valS DIP1786 valyl-tRNA synthetasechromosome CDS1830348 2760 - 0.571014