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2024-05-01 21:56:06

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Tropheryma whipplei TW08/27, TW08/27

Number of genes found: 111

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Tropheryma whipplei TW08/27, TW08/27
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TW287 class I tRNA synthetase (I, L, M and V)chromosome CDS324081 3171 + 0.461684
NA TW334 putative peptide chain release factor methyltransferasechromosome CDS366577 858 + 0.473193
NA TW424 putative rRNA methyltransferasechromosome CDS462460 792 + 0.44697
NA TW454 conserved hypothetical proteinchromosome CDS491355 969 - 0.413829
NA TW251 putative pseudouridine synthasechromosome CDS278405 912 + 0.471491
NA TW763 conserved hypothetical protein (putative deaminase)chromosome CDS860629 513 + 0.448343
NA TW810 putative RNA nucleotidyltransferasechromosome CDS918020 1437 + 0.503132
NA TW376 putative ribonucleasechromosome CDS407992 1083 - 0.397045
NA TW721 conserved hypothetical proteinchromosome CDS814114 459 - 0.479303
NA TW286 class I tRNA synthetase (I, L, M and V)chromosome CDS321314 2571 - 0.452353
NA TW661 conserved ATP/GTP binding proteinchromosome CDS752772 1035 - 0.461836
NA TW627 conserved hypothetical proteinchromosome CDS713825 1413 - 0.482661
NA TW335 conserved hypothetical proteinchromosome CDS367483 678 + 0.492625
alaS TW393 alanyl-tRNA synthetasechromosome CDS427986 2643 + 0.458948
argS TW419 arginyl-tRNA synthetasechromosome CDS456981 1653 + 0.420448
aspS TW766 aspartyl-tRNA synthetasechromosome CDS862885 1299 - 0.461124
cysS1 TW423 cysteinyl-tRNA synthetasechromosome CDS461063 1401 + 0.438258
cysS2 TW456 cysteinyl-tRNA synthetasechromosome CDS493213 1353 - 0.443459
def TW462 peptide deformylasechromosome CDS499172 606 + 0.465347
efp TW401 elongation factor Pchromosome CDS436842 558 + 0.448029
fmt TW411 methionyl-tRNA formyltransferasechromosome CDS449695 960 + 0.433333
frr TW321 ribosome recycling factorchromosome CDS353710 546 + 0.46337
fusA TW694 elongation factor Gchromosome CDS787370 2106 - 0.470085
gatA TW356 glutamyl-tRNA (gln) amidotransferase subunit Achromosome CDS389299 1482 + 0.468286
gatB TW357 glutamyl-tRNA (gln) amidotransferase subunit Bchromosome CDS390777 1515 + 0.466007
gatC TW355 glutamyl-tRNA(gln) amidotransferase subunit Cchromosome CDS389007 303 + 0.491749
gltX TW563 glutamyl-tRNA synthetasechromosome CDS600620 1443 - 0.446292
glyQS TW262 glycyl-tRNA synthetasechromosome CDS293012 3075 - 0.44
hisS TW794 histidyl-tRNA synthetasechromosome CDS900245 1281 - 0.453552
infA TW228 translation initiation factor IF-1chromosome CDS255844 222 + 0.504505
infB TW614 translation initiation factor IF-2chromosome CDS698201 2412 - 0.504975
infC TW608 translation initiation factor IF-3chromosome CDS689959 549 - 0.500911
ksgA TW569 dimethyladenosine transferasechromosome CDS616652 1257 - 0.480509
leuS TW385 leucyl-tRNA synthetasechromosome CDS418111 2421 + 0.439488
lysS TW072 lysyl-tRNA synthetasechromosome CDS62943 1638 - 0.454823
map TW511 methionine aminopeptidasechromosome CDS549738 870 + 0.449425
metG TW775 methionyl-tRNA synthetasechromosome CDS872789 1752 + 0.455479
miaA TW626 tRNA delta (2)-isopentenylpyrophosphate transferasechromosome CDS712844 861 - 0.456446
pheS TW605 phenylalanyl-tRNA synthetase alpha chainchromosome CDS687857 1011 - 0.468843
pnp TW347 mRNA processing exonucleasechromosome CDS377107 2208 + 0.495471
prfA TW333 peptide chain release factor 1chromosome CDS365530 1044 + 0.466475
prfB TW574 peptide chain release factor 2chromosome CDS627148 1131 - 0.468612
proS TW588 prolyl-tRNA synthetasechromosome CDS660811 1806 + 0.459579
pth TW673 peptidyl-tRNA hydrolasechromosome CDS764591 561 - 0.465241
rbfA TW613 ribosome-binding factor Achromosome CDS697504 591 - 0.485618
rimM TW306 probable 16s rRNA processing protein RimMchromosome CDS342303 549 + 0.489982
rne TW291 ribonuclease Echromosome CDS329749 1650 + 0.481212
rnpA TW817 ribonuclease P protein componentchromosome CDS925397 339 - 0.383481
rph TW640 ribonuclease PHchromosome CDS727191 771 - 0.46952
rplA TW730 50S ribosomal protein L1chromosome CDS825023 684 - 0.494152
rplB TW210 50s ribosomal protein l2chromosome CDS245758 834 + 0.528777
rplC TW207 50S ribosomal protein L3chromosome CDS244074 633 + 0.522907
rplD TW208 50s ribosomal protein L4chromosome CDS244696 747 + 0.52075
rplE TW219 50S ribosomal protein L5chromosome CDS249622 552 + 0.472826
rplF TW221 50S ribosomal protein L6chromosome CDS250595 546 + 0.472527
rplI TW114 50s ribosomal protein L9chromosome CDS124733 462 - 0.482684
rplJ TW729 50s ribosomal protein L10chromosome CDS824388 501 - 0.499002
rplK TW731 50S ribosomal protein L11chromosome CDS825703 426 - 0.474178
rplL TW728 50s ribosomal protein L7/L12chromosome CDS823996 381 - 0.496063
rplM TW153 50S ribosomal protein L13chromosome CDS178288 426 + 0.504695
rplN TW217 50s ribosomal protein L14chromosome CDS248910 372 + 0.505376
rplO TW224 50s ribosomal protein L15chromosome CDS252558 444 + 0.506757
rplP TW214 50s ribosomal protein L16chromosome CDS247898 432 + 0.49537
rplQ TW233 50S ribosomal protein L17chromosome CDS258010 540 + 0.555556
rplR TW222 50S ribosomal protein L18chromosome CDS251137 360 + 0.505556
rplS TW308 50s ribosomal protein L19chromosome CDS343681 348 + 0.471264
rplT TW606 50s ribosomal protein L20chromosome CDS689251 411 - 0.515815
rplU TW292 50s ribosomal protein L21chromosome CDS331522 315 + 0.495238
rplV TW212 50s ribosomal protein l22chromosome CDS246877 360 + 0.488889
rplW TW209 50s ribosomal protein L23chromosome CDS245439 312 + 0.432692
rplX TW218 50S ribosomal protein L24chromosome CDS249284 342 + 0.467836
rplY TW677 50s ribosomal protein L25chromosome CDS766845 564 - 0.52305
rpmA TW293 50s ribosomal protein L27chromosome CDS331877 249 + 0.566265
rpmB TW125 50s ribosomal protein L28chromosome CDS131520 237 + 0.540084
rpmC TW215 50s ribosomal protein L29chromosome CDS248316 240 + 0.5
rpmE TW458 50s ribosomal protein L31chromosome CDS495667 252 - 0.428571
rpmF TW198 50s ribosomal protein L32chromosome CDS236982 198 + 0.570707
rpmG TW126 50s ribosomal protein L33chromosome CDS131756 171 + 0.473684
rpmI TW607 50s ribosomal protein L35chromosome CDS689691 198 - 0.535354
rpmJ TW229 50S ribosomal protein L36chromosome CDS256068 120 + 0.491667
rpsA TW479 30s ribosomal protein S1chromosome CDS515795 1422 - 0.452883
rpsB TW318 30s ribosomal protein S2chromosome CDS351125 864 + 0.489583
rpsC TW213 30s ribosomal protein S3chromosome CDS247239 663 + 0.505279
rpsD TW392 30s ribosomal protein S4chromosome CDS427160 618 + 0.555016
rpsE TW223 30s ribosomal protein S5chromosome CDS251493 861 + 0.526132
rpsF TW117 30s ribosomal protein S6chromosome CDS126021 303 - 0.50165
rpsG TW695 30S ribosomal protein S7chromosome CDS789511 471 - 0.5138
rpsH TW220 30S ribosomal protein S8chromosome CDS250203 399 + 0.483709
rpsI TW154 30s ribosomal protein S9chromosome CDS178713 465 + 0.56129
rpsJ TW206 30S ribosomal protein S10chromosome CDS243756 309 + 0.466019
rpsK TW231 30S ribosomal protein S11chromosome CDS256600 393 + 0.513995
rpsL TW696 30S ribosomal protein S12chromosome CDS789981 375 - 0.546667
rpsM TW230 30S ribosomal protein S13chromosome CDS256222 375 + 0.52
rpsN TW127 30s ribosomal protein S14chromosome CDS131927 306 + 0.558824
rpsO TW346 30s ribosomal protein S15chromosome CDS376790 273 + 0.527473
rpsP TW304 30s ribosomal protein S16chromosome CDS341630 447 + 0.552573
rpsQ TW216 30S ribosomal protein S17chromosome CDS248552 261 + 0.482759
rpsR TW115 30s ribosomal protein S18chromosome CDS125191 252 - 0.488095
rpsS TW211 30s ribosomal protein s19chromosome CDS246596 282 + 0.489362
rpsT TW495 30s ribosomal protein S20chromosome CDS533550 288 + 0.503472
serS TW740 seryl-tRNA synthetasechromosome CDS835755 1254 + 0.46571
tgt TW620 queuine tRNA-ribosyltransferasechromosome CDS704564 1215 + 0.460082
thrS TW508 threonyl-tRNA synthetasechromosome CDS545454 1923 - 0.459178
trmD TW307 tRNA (guanine-N1)-methyltransferasechromosome CDS342884 705 + 0.425532
trmU TW353 probable tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS385916 1080 + 0.490741
trpS TW705 tryptophanyl-tRNA synthetasechromosome CDS799092 1008 + 0.453373
truA TW234 tRNA pseudouridine synthase Achromosome CDS258575 804 + 0.46393
truB TW097 tRNA pseudouridine synthase Bchromosome CDS96582 1152 - 0.444444
tsf TW319 elongation factor Tschromosome CDS352019 822 + 0.504866
tufA TW131 elongation factor TU-1chromosome CDS136972 1194 + 0.505025
tyrS TW603 tyrosyl-tRNA synthetasechromosome CDS683275 1416 - 0.47952