Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Bradyrhizobium japonicum USDA 110, USDA110
Number of genes found: 237
Hide UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Bradyrhizobium japonicum USDA 110, USDA110 | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
alaS | alanyl-tRNA synthetase | RecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; | chromosome | CDS | 6315732 | 2685 | - | 0.673371 | |
amiC | SubName: Full=AmiC protein; | chromosome | CDS | 8013463 | 1458 | + | 0.670096 | ||
bam | indoleacetamide hydrolase | RecName: Full=Indoleacetamide hydrolase; Short=IAH; EC=3.5.1.-; AltName: Full=Indole-3-acetamide hydrolase; | chromosome | CDS | 242527 | 1575 | - | 0.668571 | |
bll0198 | amidase | SubName: Full=Amidase; EC=3.5.1.4; | chromosome | CDS | 193060 | 1515 | - | 0.635644 | |
bll0254 | SubName: Full=Bll0254 protein; | chromosome | CDS | 251201 | 408 | - | 0.605392 | ||
bll0476 | SubName: Full=Bll0476 protein; | chromosome | CDS | 515845 | 1254 | - | 0.673046 | ||
bll0648 | SubName: Full=Bll0648 protein; | chromosome | CDS | 695174 | 486 | - | 0.676955 | ||
bll0710 | translation initiation factor IF-3 | RecName: Full=Translation initiation factor IF-3; | chromosome | CDS | 759202 | 540 | - | 0.592593 | |
bll0784 | SubName: Full=Bll0784 protein; | chromosome | CDS | 842439 | 684 | - | 0.640351 | ||
bll0795 | RecName: Full=tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase; EC=2.8.4.3; AltName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase; | chromosome | CDS | 853999 | 1398 | - | 0.653791 | ||
bll0957 | RecName: Full=Amino acid--[acyl-carrier-protein] ligase 1; EC=6.2.1.n2; AltName: Full=Amino acid:[carrier-protein] ligase [AMP forming] 1; Short=aa:CP ligase 1; AltName: Full=Aminoacyl-[acyl-carrier-protein] synthetase 1; AltName: Full=L-glycine:[acyl-carrier-protein] ligase 1; | chromosome | CDS | 1046792 | 981 | - | 0.668705 | ||
bll1044 | glutamyl-tRNA(Gln) amidotransferase | SubName: Full=Glutamyl-tRNA(Gln) amidotransferase; | chromosome | CDS | 1154442 | 1809 | - | 0.680486 | |
bll1127 | SubName: Full=Bll1127 protein; | chromosome | CDS | 1240452 | 351 | - | 0.638177 | ||
bll1145 | SubName: Full=Bll1145 protein; | chromosome | CDS | 1258005 | 1038 | - | 0.671484 | ||
bll1153 | SubName: Full=Bll1153 protein; | chromosome | CDS | 1268040 | 771 | - | 0.654994 | ||
bll1287 | SubName: Full=Bll1287 protein; | chromosome | CDS | 1397664 | 348 | - | 0.701149 | ||
bll1462 | SubName: Full=Bll1462 protein; | chromosome | CDS | 1593581 | 360 | - | 0.591667 | ||
bll1930 | SubName: Full=Bll1930 protein; | chromosome | CDS | 2087750 | 2511 | - | 0.617284 | ||
bll2093 | SubName: Full=Bll2093 protein; | chromosome | CDS | 2264015 | 318 | - | 0.566038 | ||
bll2184 | SubName: Full=Bll2184 protein; | chromosome | CDS | 2359095 | 444 | - | 0.581081 | ||
bll2484 | tRNA/rRNA methyltransferase | RecName: Full=tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase TrmL; | chromosome | CDS | 2707248 | 459 | - | 0.671024 | |
bll2495 | SubName: Full=Bll2495 protein; | chromosome | CDS | 2719655 | 984 | - | 0.694106 | ||
bll2570 | SubName: Full=Bll2570 protein; | chromosome | CDS | 2811669 | 990 | - | 0.716162 | ||
bll2648 | RNA methyltransferase | RecName: Full=Uncharacterized RNA methyltransferase bll2648; EC=2.1.1.-; | chromosome | CDS | 2894110 | 1248 | - | 0.705929 | |
bll2649 | SubName: Full=Bll2649 protein; | chromosome | CDS | 2895350 | 738 | - | 0.673442 | ||
bll2914 | SubName: Full=Bll2914 protein; | chromosome | CDS | 3206927 | 1239 | - | 0.663438 | ||
bll3115 | SubName: Full=Bll3115 protein; | chromosome | CDS | 3438994 | 1596 | - | 0.680451 | ||
bll3281 | SubName: Full=Bll3281 protein; | chromosome | CDS | 3638354 | 1368 | - | 0.700292 | ||
bll3378 | SubName: Full=Bll3378 protein; | chromosome | CDS | 3742809 | 456 | - | 0.638158 | ||
bll3507 | SubName: Full=Bll3507 protein; | chromosome | CDS | 3877265 | 372 | - | 0.647849 | ||
bll3646 | SubName: Full=Bll3646 protein; | chromosome | CDS | 4030642 | 1131 | - | 0.62069 | ||
bll3874 | SubName: Full=Bll3874 protein; | chromosome | CDS | 4295373 | 1497 | - | 0.678023 | ||
bll3976 | SubName: Full=Bll3976 protein; | chromosome | CDS | 4415865 | 345 | - | 0.634783 | ||
bll4303 | SubName: Full=Bll4303 protein; | chromosome | CDS | 4745206 | 1497 | - | 0.693387 | ||
bll4305 | ribonuclease E | RecName: Full=Ribonuclease E; Short=RNase E; EC=3.1.26.12; | chromosome | CDS | 4747660 | 3099 | - | 0.680542 | |
bll4678 | SubName: Full=Bll4678 protein; | chromosome | CDS | 5181427 | 399 | - | 0.689223 | ||
bll4756 | SubName: Full=Bll4756 protein; | chromosome | CDS | 5265952 | 678 | - | 0.620944 | ||
bll4757 | arginyl-tRNA synthetase | SubName: Full=Arginyl-tRNA synthetase; | chromosome | CDS | 5266493 | 1251 | - | 0.656275 | |
bll4780 | SubName: Full=Bll4780 protein; | chromosome | CDS | 5296449 | 453 | - | 0.615894 | ||
bll4861 | 30S ribosomal protein S2 | RecName: Full=30S ribosomal protein S2; | chromosome | CDS | 5385374 | 996 | - | 0.65261 | |
bll4888 | SubName: Full=Bll4888 protein; | chromosome | CDS | 5419991 | 501 | - | 0.632735 | ||
bll4950 | SubName: Full=Bll4950 protein; | chromosome | CDS | 5493533 | 1140 | - | 0.64386 | ||
bll5103 | malonamidase E2 | SubName: Full=Malonamidase E2; | chromosome | CDS | 5660060 | 1245 | - | 0.693976 | |
bll5130 | SubName: Full=Bll5130 protein; | chromosome | CDS | 5687160 | 657 | - | 0.64688 | ||
bll5366 | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 5911825 | 1218 | - | 0.665025 | ||
bll5457 | SubName: Full=Bll5457 protein; | chromosome | CDS | 5999792 | 402 | - | 0.644279 | ||
bll5806 | SubName: Full=Bll5806 protein; | chromosome | CDS | 6369606 | 1386 | - | 0.652958 | ||
bll5980 | glucose-1-phosphate cytidylyltransferase | SubName: Full=Glucose-1-phosphate cytidylyltransferase; | chromosome | CDS | 6578364 | 771 | - | 0.612192 | |
bll6075 | SubName: Full=Bll6075 protein; | chromosome | CDS | 6692057 | 459 | - | 0.671024 | ||
bll6187 | SubName: Full=Bll6187 protein; | chromosome | CDS | 6809438 | 570 | - | 0.636842 | ||
bll6282 | RecName: Full=Amino acid--[acyl-carrier-protein] ligase 2; EC=6.2.1.n2; AltName: Full=Amino acid:[carrier-protein] ligase [AMP forming] 2; Short=aa:CP ligase 2; AltName: Full=Aminoacyl-[acyl-carrier-protein] synthetase 2; AltName: Full=L-glycine:[acyl-carrier-protein] ligase 2; | chromosome | CDS | 6912472 | 1005 | - | 0.648756 | ||
bll6504 | tRNA delta(2)-isopentenylpyrophosphate | RecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; | chromosome | CDS | 7162182 | 957 | - | 0.695925 | |
bll6609 | SubName: Full=Bll6609 protein; | chromosome | CDS | 7284041 | 393 | - | 0.661578 | ||
bll6696 | SubName: Full=Bll6696 protein; | chromosome | CDS | 7365937 | 699 | - | 0.632332 | ||
bll6733 | SubName: Full=Bll6733 protein; | chromosome | CDS | 7417595 | 1401 | - | 0.688794 | ||
bll7189 | SubName: Full=Bll7189 protein; | chromosome | CDS | 7913165 | 348 | - | 0.632184 | ||
bll7414 | SubName: Full=Bll7414 protein; | chromosome | CDS | 8152884 | 2049 | - | 0.667643 | ||
bll7439 | GTP-binding protein | RecName: Full=Ribosome-binding ATPase YchF; | chromosome | CDS | 8178520 | 1098 | - | 0.653916 | |
bll7495 | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 8230448 | 2091 | - | 0.702535 | ||
bll7917 | SubName: Full=Bll7917 protein; | chromosome | CDS | 8679802 | 1416 | - | 0.679379 | ||
blr0101 | SubName: Full=Blr0101 protein; | chromosome | CDS | 97367 | 930 | + | 0.675269 | ||
blr0422 | SubName: Full=Blr0422 protein; | chromosome | CDS | 454879 | 615 | + | 0.678049 | ||
blr0474 | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 513743 | 657 | + | 0.680365 | ||
blr0719 | SubName: Full=Blr0719 protein; | chromosome | CDS | 768465 | 615 | + | 0.674797 | ||
blr0724 | sigma-54 modulation protein | RecName: Full=Uncharacterized protein blr0724; AltName: Full=ORF203; | chromosome | CDS | 773756 | 612 | + | 0.651961 | |
blr0866 | SubName: Full=Blr0866 protein; | chromosome | CDS | 932292 | 3576 | + | 0.597036 | ||
blr0961 | RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi; Short=MTR-1-P isomerase; EC=5.3.1.23; AltName: Full=S-methyl-5-thioribose-1-phosphate isomerase; | chromosome | CDS | 1050850 | 1107 | + | 0.6757 | ||
blr1015 | SubName: Full=Blr1015 protein; | chromosome | CDS | 1120042 | 498 | + | 0.658635 | ||
blr1041 | glutamyl-tRNA(Gln) amidotransferase | SubName: Full=Glutamyl-tRNA(Gln) amidotransferase; | chromosome | CDS | 1151834 | 1377 | + | 0.679012 | |
blr1191 | SubName: Full=Blr1191 protein; | chromosome | CDS | 1305827 | 555 | + | 0.681081 | ||
blr1241 | SubName: Full=Blr1241 protein; | chromosome | CDS | 1356349 | 384 | + | 0.653646 | ||
blr1563 | SubName: Full=Blr1563 protein; | chromosome | CDS | 1703427 | 315 | + | 0.498413 | ||
blr1656 | SubName: Full=Blr1656 protein; | chromosome | CDS | 1814084 | 807 | + | 0.555143 | ||
blr1935 | SubName: Full=Blr1935 protein; | chromosome | CDS | 2099298 | 1068 | + | 0.65824 | ||
blr1970 | SubName: Full=Blr1970 protein; | chromosome | CDS | 2127626 | 333 | + | 0.600601 | ||
blr2135 | SubName: Full=Blr2135 protein; | chromosome | CDS | 2309012 | 1578 | + | 0.581115 | ||
blr2300 | SubName: Full=Blr2300 protein; | chromosome | CDS | 2493249 | 2598 | + | 0.598537 | ||
blr2865 | SubName: Full=Blr2865 protein; | chromosome | CDS | 3154701 | 747 | + | 0.646586 | ||
blr2960 | glutamyl-tRNA(Gln) amidotransferase subunit | SubName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit; | chromosome | CDS | 3263958 | 1350 | + | 0.682222 | |
blr3229 | SubName: Full=Blr3229 protein; | chromosome | CDS | 3567022 | 1428 | + | 0.689776 | ||
blr3288 | SubName: Full=Blr3288 protein; | chromosome | CDS | 3645212 | 1380 | + | 0.686957 | ||
blr3406 | SubName: Full=Blr3406 protein; | chromosome | CDS | 3774330 | 486 | + | 0.557613 | ||
blr3438 | SubName: Full=Blr3438 protein; | chromosome | CDS | 3807393 | 441 | + | 0.648526 | ||
blr3734 | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 4143354 | 996 | + | 0.663655 | ||
blr3985 | Sun protein | SubName: Full=Sun protein; | chromosome | CDS | 4422745 | 1302 | + | 0.689708 | |
blr4143 | aspartyl-tRNA synthetase | RecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; | chromosome | CDS | 4580678 | 1773 | + | 0.640722 | |
blr4387 | lysyl-tRNA synthetase | SubName: Full=Lysyl-tRNA synthetase; | chromosome | CDS | 4850419 | 1065 | + | 0.665728 | |
blr4467 | SubName: Full=Blr4467 protein; | chromosome | CDS | 4944188 | 384 | + | 0.658854 | ||
blr4575 | RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; | chromosome | CDS | 5067100 | 1320 | + | 0.661364 | ||
blr4676 | SubName: Full=Blr4676 protein; | chromosome | CDS | 5179774 | 588 | + | 0.668367 | ||
blr4727 | glucose inhibited division protein | RecName: Full=Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO; EC=2.1.1.74; AltName: Full=Folate-dependent tRNA (uracil-5-)-methyltransferase; AltName: Full=Folate-dependent tRNA(M-5-U54)-methyltransferase; | chromosome | CDS | 5234614 | 1428 | + | 0.667367 | |
blr5024 | SubName: Full=Blr5024 protein; | chromosome | CDS | 5569853 | 558 | + | 0.646953 | ||
blr5113 | SubName: Full=Blr5113 protein; | chromosome | CDS | 5671165 | 441 | + | 0.641723 | ||
blr5132 | SubName: Full=Blr5132 protein; | chromosome | CDS | 5688835 | 582 | + | 0.690722 | ||
blr5236 | SubName: Full=Blr5236 protein; | chromosome | CDS | 5786531 | 465 | + | 0.576344 | ||
blr5253 | SubName: Full=Blr5253 protein; | chromosome | CDS | 5802789 | 1311 | + | 0.681922 | ||
blr5499 | tRNA/rRNA metyltransferase | SubName: Full=tRNA/rRNA metyltransferase; | chromosome | CDS | 6060059 | 927 | + | 0.677454 | |
blr5705 | SubName: Full=Blr5705 protein; | chromosome | CDS | 6270432 | 768 | + | 0.690104 | ||
blr5969 | SubName: Full=Blr5969 protein; | chromosome | CDS | 6566430 | 1434 | + | 0.693863 | ||
blr5988 | SubName: Full=Blr5988 protein; | chromosome | CDS | 6586873 | 1224 | + | 0.648693 | ||
blr6153 | SubName: Full=Blr6153 protein; | chromosome | CDS | 6769329 | 480 | + | 0.7 | ||
blr6526 | SubName: Full=Blr6526 protein; | chromosome | CDS | 7182269 | 408 | + | 0.622549 | ||
blr6667 | SubName: Full=Blr6667 protein; | chromosome | CDS | 7341545 | 384 | + | 0.674479 | ||
blr7336 | RecName: Full=Pseudouridine synthase; EC=5.4.99.-; | chromosome | CDS | 8073469 | 1008 | + | 0.684524 | ||
blr7351 | SubName: Full=Blr7351 protein; | chromosome | CDS | 8090129 | 564 | + | 0.679078 | ||
blr7466 | ribonuclease | SubName: Full=Ribonuclease; | chromosome | CDS | 8201728 | 711 | + | 0.661041 | |
blr7474 | hypothetical adenine-specific methylase | RecName: Full=50S ribosomal protein L3 glutamine methyltransferase; Short=L3 MTase; EC=2.1.1.298; AltName: Full=N5-glutamine methyltransferase PrmB; | chromosome | CDS | 8208355 | 960 | + | 0.661458 | |
blr7486 | SubName: Full=Blr7486 protein; | chromosome | CDS | 8223206 | 417 | + | 0.673861 | ||
blr7496 | nitrogen fixation protein | RecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; | chromosome | CDS | 8232646 | 459 | + | 0.642702 | |
blr7761 | SubName: Full=Blr7761 protein; | chromosome | CDS | 8510787 | 390 | + | 0.641026 | ||
blr7896 | SubName: Full=Blr7896 protein; | chromosome | CDS | 8658031 | 1473 | + | 0.669382 | ||
bsl0158 | SubName: Full=Bsl0158 protein; | chromosome | CDS | 154108 | 231 | - | 0.670996 | ||
bsl0348 | SubName: Full=Bsl0348 protein; | chromosome | CDS | 366565 | 300 | - | 0.503333 | ||
bsl6528 | SubName: Full=Bsl6528 protein; | chromosome | CDS | 7183398 | 183 | - | 0.650273 | ||
bsl8076 | SubName: Full=Bsl8076 protein; | chromosome | CDS | 8856860 | 267 | - | 0.621723 | ||
bsr8096 | ribosomal protein L34 | RecName: Full=50S ribosomal protein L34; | chromosome | CDS | 8889769 | 135 | + | 0.703704 | |
cysS | cysteinyl-tRNA synthetase | RecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; | chromosome | CDS | 4200568 | 1383 | + | 0.647867 | |
deaD | cold-shock dead-box protein A | SubName: Full=Cold-shock dead-box protein A; | chromosome | CDS | 6121063 | 1953 | - | 0.672299 | |
def | polypeptide deformylase | RecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; | chromosome | CDS | 8901637 | 525 | - | 0.620952 | |
def | polypeptide deformylase | RecName: Full=Peptide deformylase-like; AltName: Full=Polypeptide deformylase-like; | chromosome | CDS | 4443044 | 513 | - | 0.664717 | |
efp | elongation factor P | RecName: Full=Elongation factor P; Short=EF-P; | chromosome | CDS | 4849690 | 531 | - | 0.625235 | |
fmt | methionyl-tRNA formyl transferase | RecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; | chromosome | CDS | 8900558 | 936 | - | 0.685897 | |
ftsJ | cell division protein | RecName: Full=Ribosomal RNA large subunit methyltransferase E; EC=2.1.1.166; AltName: Full=23S rRNA Um2552 methyltransferase; AltName: Full=rRNA (uridine-2-O-)-methyltransferase; | chromosome | CDS | 4407635 | 687 | + | 0.6623 | |
fusA | translation elongation factor G | RecName: Full=Elongation factor G; Short=EF-G; | chromosome | CDS | 5938219 | 2073 | - | 0.623734 | |
galF | nucleotidyltransferase family protein | SubName: Full=Nucleotidyltransferase family protein; | chromosome | CDS | 806148 | 723 | - | 0.666667 | |
gatA | glutamyl-tRNA amidotransferase subunit A | RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; | chromosome | CDS | 5645187 | 1476 | - | 0.678862 | |
gatA | glutamyl-tRNA amidotransferase subunit A | SubName: Full=Glutamyl-tRNA amidotransferase subunit A; | chromosome | CDS | 6163563 | 1422 | + | 0.685654 | |
gatB | glutamyl-tRNA amidotransferase subunit B | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; | chromosome | CDS | 5643419 | 1479 | - | 0.634212 | |
gatC | glutamyl-tRNA-Gln-amidotransferase chain C | RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Short=Asp/Glu-ADT subunit C; EC=6.3.5.-; | chromosome | CDS | 5646890 | 288 | - | 0.645833 | |
glnS | glutaminyl-tRNA synthetase | RecName: Full=Glutamine--tRNA ligase; EC=6.1.1.18; AltName: Full=Glutaminyl-tRNA synthetase; Short=GlnRS; | chromosome | CDS | 5359135 | 1677 | - | 0.636852 | |
gltX | glutamyl-tRNA synthetase | RecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; | chromosome | CDS | 5360966 | 1428 | + | 0.662465 | |
gltX | glutamyl-tRNA Synthetase | SubName: Full=Glutamyl-tRNA Synthetase; | chromosome | CDS | 1488874 | 906 | + | 0.683223 | |
glyQ | glycyl-tRNA synthetase, alpha subunit | RecName: Full=Glycine--tRNA ligase alpha subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Short=GlyRS; | chromosome | CDS | 2769929 | 936 | + | 0.650641 | |
glyS | glycyl-tRNA synthetase beta chain | RecName: Full=Glycine--tRNA ligase beta subunit; EC=6.1.1.14; AltName: Full=Glycyl-tRNA synthetase beta subunit; Short=GlyRS; | chromosome | CDS | 2770864 | 2100 | + | 0.651905 | |
gshB | glutathione synthetase | RecName: Full=Glutathione synthetase; EC=6.3.2.3; AltName: Full=GSH synthetase; Short=GSH-S; Short=GSHase; AltName: Full=Glutathione synthase; | chromosome | CDS | 714107 | 945 | - | 0.660317 | |
hemK | protoporphyrinogen oxidase | RecName: Full=Release factor glutamine methyltransferase; Short=RF MTase; EC=2.1.1.297; AltName: Full=N5-glutamine methyltransferase PrmC; AltName: Full=Protein-(glutamine-N5) MTase PrmC; AltName: Full=Protein-glutamine N-methyltransferase PrmC; | chromosome | CDS | 216158 | 894 | + | 0.681208 | |
hisS | histidyl-tRNA synthetase | RecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; | chromosome | CDS | 8193476 | 1521 | - | 0.656147 | |
hisZ | SubName: Full=HisZ protein; | chromosome | CDS | 8257318 | 1152 | + | 0.689236 | ||
hoxX | RecName: Full=Hydrogenase maturation factor HoxX; | chromosome | CDS | 7622821 | 1701 | - | 0.673133 | ||
ileS | isoleucyl-tRNA synthetase | RecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; | chromosome | CDS | 8215632 | 3009 | + | 0.643403 | |
infA | translation initiation factor IF-1 | RecName: Full=Translation initiation factor IF-1; | chromosome | CDS | 1577070 | 291 | - | 0.656357 | |
infB | translation initiation factor IF-2 | RecName: Full=Translation initiation factor IF-2; | chromosome | CDS | 839659 | 2709 | - | 0.685493 | |
ksgA | rRNA-adenine N6,N6-dimethyltransferase | RecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; | chromosome | CDS | 4532853 | 855 | - | 0.669006 | |
leuS | leucyl-tRNA synthetase | RecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; | chromosome | CDS | 671621 | 2625 | + | 0.642667 | |
ligT | 2'-5' RNA ligase | SubName: Full=2-5 RNA ligase; | chromosome | CDS | 496737 | 537 | - | 0.635009 | |
lysS | lysyl-tRNA synthetase | RecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; | chromosome | CDS | 1246626 | 1644 | + | 0.641119 | |
map | methionin aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 5400775 | 750 | - | 0.641333 | |
map | methionine aminopeptidase | RecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; | chromosome | CDS | 8971633 | 819 | + | 0.652015 | |
metG | methionyl-tRNA synthetase | RecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; | chromosome | CDS | 5002713 | 1977 | - | 0.645928 | |
mgpS | ATP-dependent helicase | SubName: Full=ATP-dependent helicase; | chromosome | CDS | 154387 | 3372 | - | 0.686536 | |
nifR | nitrogen regulation protein | RecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; | chromosome | CDS | 4967026 | 1116 | + | 0.667563 | |
papS | poly(A) polymerase | SubName: Full=Poly(A) polymerase; | chromosome | CDS | 2693546 | 1257 | + | 0.705648 | |
pheS | phenylalanyl-tRNA synthetase alpha chain | RecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; | chromosome | CDS | 756139 | 1083 | - | 0.652816 | |
pnpA | polyribonucleotide nucleotidyltransferase | RecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; | chromosome | CDS | 835059 | 2163 | - | 0.649561 | |
prfA | peptide chain release factor 1 | RecName: Full=Peptide chain release factor 1; Short=RF-1; | chromosome | CDS | 215076 | 1086 | + | 0.665746 | |
prfB | peptide chain release factor 2 | SubName: Full=Peptide chain release factor 2; | chromosome | CDS | 4755806 | 969 | + | 0.662539 | |
prfC | peptide chain release factor 3 | RecName: Full=Peptide chain release factor 3; Short=RF-3; | chromosome | CDS | 4473912 | 1623 | + | 0.644486 | |
prmA | ribosomal protein L11 methyltransferase | RecName: Full=Ribosomal protein L11 methyltransferase; Short=L11 Mtase; EC=2.1.1.-; | chromosome | CDS | 7253701 | 888 | + | 0.684685 | |
proS | prolyl-tRNA synthetase | RecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; | chromosome | CDS | 5407208 | 1320 | - | 0.644697 | |
pth | peptidyl-tRNA hydrolase | RecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; | chromosome | CDS | 8179623 | 606 | - | 0.645214 | |
queA | S-adenosylmethionine tRNA ribosyltransferase | RecName: Full=S-adenosylmethionine:tRNA ribosyltransferase-isomerase; EC=2.4.99.17; AltName: Full=Queuosine biosynthesis protein QueA; | chromosome | CDS | 5193245 | 1101 | - | 0.682107 | |
rbfA | ribosome-binding factor A | RecName: Full=Ribosome-binding factor A; | chromosome | CDS | 839071 | 435 | - | 0.613793 | |
rhlE | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome | CDS | 4804544 | 1503 | - | 0.679308 | |
rhlE | dead-box ATP-dependent RNA helicase | SubName: Full=Dead-box ATP-dependent RNA helicase; | chromosome | CDS | 1577384 | 1593 | - | 0.674827 | |
rimJ | ribosomal-protein-alanine N-acetyltransferase | SubName: Full=Ribosomal-protein-alanine N-acetyltransferase; | chromosome | CDS | 1301274 | 588 | + | 0.67517 | |
rimM | 16S rRNA processing protein | RecName: Full=Ribosome maturation factor RimM; | chromosome | CDS | 523326 | 522 | + | 0.67433 | |
rnd | ribonuclease D | RecName: Full=Ribonuclease D; Short=RNase D; EC=3.1.13.5; | chromosome | CDS | 4571210 | 1149 | - | 0.666667 | |
rnpA | ribonuclease P protein component | RecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; | chromosome | CDS | 8889931 | 399 | + | 0.649123 | |
rph | Ribonuclease PH | RecName: Full=Ribonuclease PH; Short=RNase PH; EC=2.7.7.56; AltName: Full=tRNA nucleotidyltransferase; | chromosome | CDS | 719929 | 714 | - | 0.677871 | |
rplA | 50S ribosomal protein L1 | RecName: Full=50S ribosomal protein L1; | chromosome | CDS | 5958973 | 693 | - | 0.65368 | |
rplB | 50S ribosomal protein L2 | RecName: Full=50S ribosomal protein L2; | chromosome | CDS | 5934062 | 834 | - | 0.640288 | |
rplC | 50S ribosomal protein L3 | RecName: Full=50S ribosomal protein L3; | chromosome | CDS | 5935829 | 717 | - | 0.656904 | |
rplD | 50S ribosomal protein L4 | RecName: Full=50S ribosomal protein L4; | chromosome | CDS | 5935207 | 663 | - | 0.653092 | |
rplE | 50S ribosomal protein L5 | RecName: Full=50S ribosomal protein L5; | chromosome | CDS | 5930392 | 558 | - | 0.629032 | |
rplF | 50S ribosomal protein L6 | RecName: Full=50S ribosomal protein L6; | chromosome | CDS | 5929077 | 534 | - | 0.625468 | |
rplI | 50S ribosomal protein L9 | RecName: Full=50S ribosomal protein L9; | chromosome | CDS | 4510458 | 606 | - | 0.660066 | |
rplJ | 50S ribosomal Protein L10 | RecName: Full=50S ribosomal protein L10; | chromosome | CDS | 5956812 | 546 | - | 0.619048 | |
rplK | 50S ribosomal Protein L11 | RecName: Full=50S ribosomal protein L11; | chromosome | CDS | 5959672 | 429 | - | 0.606061 | |
rplL | 50S ribosomal protein L7/L12 | RecName: Full=50S ribosomal protein L7/L12; | chromosome | CDS | 5956380 | 378 | - | 0.637566 | |
rplM | 50S ribosomal protein L13 | RecName: Full=50S ribosomal protein L13; | chromosome | CDS | 5504828 | 465 | - | 0.636559 | |
rplN | 50S ribosomal protein L14 | RecName: Full=50S ribosomal protein L14; | chromosome | CDS | 5931256 | 369 | - | 0.631436 | |
rplO | 50S ribosomal protein L15 | RecName: Full=50S ribosomal protein L15; | chromosome | CDS | 5927285 | 486 | - | 0.674897 | |
rplP | 50S ribosomal protein L16 | RecName: Full=50S ribosomal protein L16; | chromosome | CDS | 5932183 | 411 | - | 0.676399 | |
rplQ | 50S ribosomal protein L17 | RecName: Full=50S ribosomal protein L17; | chromosome | CDS | 5921813 | 417 | - | 0.64988 | |
rplR | 50S ribosomal protein L18 | RecName: Full=50S ribosomal protein L18; | chromosome | CDS | 5928703 | 363 | - | 0.658402 | |
rplS | 50S ribosomal protein L19 | RecName: Full=50S ribosomal protein L19; | chromosome | CDS | 527044 | 381 | + | 0.627297 | |
rplT | 50S ribosomal protein L20 | RecName: Full=50S ribosomal protein L20; | chromosome | CDS | 757818 | 360 | - | 0.655556 | |
rplU | 50S ribosomal protein L21 | RecName: Full=50S ribosomal protein L21; | chromosome | CDS | 454016 | 390 | + | 0.646154 | |
rplV | 50S ribosomal protein L22 | RecName: Full=50S ribosomal protein L22; | chromosome | CDS | 5933371 | 390 | - | 0.630769 | |
rplW | 50S ribosomal protein L23 | RecName: Full=50S ribosomal protein L23; | chromosome | CDS | 5934908 | 303 | - | 0.594059 | |
rplX | 50S ribosomal protein L24 | RecName: Full=50S ribosomal protein L24; | chromosome | CDS | 5930942 | 315 | - | 0.631746 | |
rplY | 50S ribosomal protein L25 | RecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; | chromosome | CDS | 8180291 | 717 | - | 0.670851 | |
rpmA | 50S ribosomal protein L27 | RecName: Full=50S ribosomal protein L27; | chromosome | CDS | 454503 | 270 | + | 0.6 | |
rpmB | 50S ribosomal protein L28 | RecName: Full=50S ribosomal protein L28; | chromosome | CDS | 159877 | 309 | + | 0.660194 | |
rpmC | 50S ribosomal protein L29 | RecName: Full=50S ribosomal protein L29; | chromosome | CDS | 5931971 | 207 | - | 0.647343 | |
rpmD | 50S ribosomal protein L30 | RecName: Full=50S ribosomal protein L30; | chromosome | CDS | 5927846 | 195 | - | 0.625641 | |
rpmE | 50S ribosomal protein L31 | RecName: Full=50S ribosomal protein L31; | chromosome | CDS | 1642176 | 228 | - | 0.587719 | |
rpmF | 50S ribosomal protein L32 | RecName: Full=50S ribosomal protein L32; | chromosome | CDS | 1035828 | 183 | + | 0.606557 | |
rpmG | 50S ribosomal protein L33 | RecName: Full=50S ribosomal protein L33; | chromosome | CDS | 5674682 | 168 | + | 0.565476 | |
rpmI | 50S ribosomal protein L35 | RecName: Full=50S ribosomal protein L35; | chromosome | CDS | 758258 | 201 | - | 0.587065 | |
rpmJ | 50S ribosomal protein L36 | RecName: Full=50S ribosomal protein L36; | chromosome | CDS | 8283697 | 126 | - | 0.634921 | |
rps21 | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21 1; | chromosome | CDS | 389916 | 321 | + | 0.629283 | |
rpsA | 30S ribosomal protein S1 | RecName: Full=30S ribosomal protein S1; | chromosome | CDS | 788093 | 1749 | + | 0.627787 | |
rpsC | 30S ribosomal protein S3 | RecName: Full=30S ribosomal protein S3; | chromosome | CDS | 5932627 | 726 | - | 0.65427 | |
rpsD | 30S ribosomal protein S4 | RecName: Full=30S ribosomal protein S4; | chromosome | CDS | 6271505 | 618 | + | 0.63754 | |
rpsE | 30s ribosomal protein S5 | RecName: Full=30S ribosomal protein S5; | chromosome | CDS | 5928065 | 594 | - | 0.688552 | |
rpsF | 30S ribosomal protein S6 | RecName: Full=30S ribosomal protein S6; | chromosome | CDS | 4512465 | 501 | - | 0.656687 | |
rpsG | 30S ribosomal protein S7 | RecName: Full=30S ribosomal protein S7; | chromosome | CDS | 5940325 | 471 | - | 0.624204 | |
rpsH | 30S ribosomal protein S8 | RecName: Full=30S ribosomal protein S8; | chromosome | CDS | 5929627 | 399 | - | 0.626566 | |
rpsI | 30S ribosomal protein S9 | RecName: Full=30S ribosomal protein S9; | chromosome | CDS | 5504347 | 480 | - | 0.660417 | |
rpsJ | 30S ribosomal protein S10 | RecName: Full=30S ribosomal protein S10; | chromosome | CDS | 5936598 | 309 | - | 0.605178 | |
rpsK | 30S ribosomal protein S11 | RecName: Full=30S ribosomal protein S11; | chromosome | CDS | 5923565 | 390 | - | 0.674359 | |
rpsL | 30S ribosomal protein S12 | RecName: Full=30S ribosomal protein S12; | chromosome | CDS | 5940811 | 372 | - | 0.63172 | |
rpsM | 30S ribosomal protein S13 | RecName: Full=30S ribosomal protein S13; | chromosome | CDS | 5924078 | 369 | - | 0.626016 | |
rpsN | 30S ribosomal protein S14 | RecName: Full=30S ribosomal protein S14; | chromosome | CDS | 5930040 | 306 | - | 0.630719 | |
rpsO | 30S ribosomal protein S15 | RecName: Full=30S ribosomal protein S15; | chromosome | CDS | 837684 | 270 | - | 0.581481 | |
rpsP | 30S ribosomal protein S16 | RecName: Full=30S ribosomal protein S16; | chromosome | CDS | 522984 | 333 | + | 0.672673 | |
rpsQ | 30S ribosomal protein S17 | RecName: Full=30S ribosomal protein S17; | chromosome | CDS | 5931709 | 249 | - | 0.574297 | |
rpsR | 30S ribosomal protein S18 | RecName: Full=30S ribosomal protein S18; | chromosome | CDS | 4512220 | 240 | - | 0.633333 | |
rpsS | 30S ribosomal protein S19 | RecName: Full=30S ribosomal protein S19; | chromosome | CDS | 5933771 | 279 | - | 0.605735 | |
rpsT | 30S ribosomal protein S20 | RecName: Full=30S ribosomal protein S20; | chromosome | CDS | 896406 | 267 | - | 0.662921 | |
rpsU | 30S ribosomal protein S21 | RecName: Full=30S ribosomal protein S21 2; | chromosome | CDS | 7834171 | 297 | + | 0.659933 | |
rrf | ribosome recycling factor | RecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; | chromosome | CDS | 5382907 | 567 | - | 0.643739 | |
serS | seryl-tRNA synthetase | RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; | chromosome | CDS | 5258186 | 1332 | - | 0.651652 | |
sun | SUN protein | SubName: Full=SUN protein; | chromosome | CDS | 621965 | 1347 | + | 0.701559 | |
tgt | queuine tRNA-ribosyltransferase | RecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; | chromosome | CDS | 5186220 | 1218 | - | 0.667488 | |
thrS | threonyl-tRNA synthetase | RecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; | chromosome | CDS | 6094949 | 2172 | + | 0.635819 | |
tms2 | indole acetamide hydrolase | SubName: Full=Indole acetamide hydrolase; | chromosome | CDS | 7060169 | 1416 | - | 0.617938 | |
trmD | tRNA (guanine-N1)-methyltransferase | RecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; | chromosome | CDS | 526166 | 768 | + | 0.700521 | |
trmU | tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase | RecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; | chromosome | CDS | 7702895 | 1182 | - | 0.683587 | |
trpS | tryptophan-tRNA ligase | RecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; | chromosome | CDS | 859551 | 1053 | - | 0.641975 | |
truA | tRNA pseudouridine synthase I | RecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; | chromosome | CDS | 8899700 | 759 | - | 0.666667 | |
truB | tRNA pseudouridine 55 synthase | RecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; | chromosome | CDS | 837956 | 1038 | - | 0.668593 | |
tsf | translation elongation factor Ts | RecName: Full=Elongation factor Ts; Short=EF-Ts; | chromosome | CDS | 5384317 | 924 | - | 0.646104 | |
tuf | elongation factor TU | RecName: Full=Elongation factor Tu; Short=EF-Tu; | chromosome | CDS | 5936988 | 1191 | - | 0.645676 | |
tyrS | tyrosyl-tRNA synthetase | RecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; | chromosome | CDS | 4787647 | 1254 | - | 0.640351 | |
valS | valyl-tRNA synthetase | RecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; | chromosome | CDS | 4954238 | 2877 | + | 0.656587 |