Gene list
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COG category: Translation, ribosomal structure and biogenesis
Organism: Xylella fastidiosa 9a5c
Number of genes found: 145
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Xylella fastidiosa 9a5c | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | XF2222 | histidyl-tRNA synthetase | chromosome | CDS | 2107298 | 1401 | - | 0.556031 |
NA | XF2286 | seryl-tRNA synthetase | chromosome | CDS | 2174738 | 1299 | - | 0.514242 |
NA | XF0090 | tRNA delta(2)-isopentenylpyrophosphate transferase | chromosome | CDS | 90094 | 954 | - | 0.534591 |
NA | XF2176 | leucyl-tRNA synthetase | chromosome | CDS | 2061553 | 2664 | + | 0.542042 |
NA | XF0822 | glutamyl-tRNA synthetase | chromosome | CDS | 774081 | 1404 | - | 0.583333 |
NA | XF0939 | ribosomal large subunit pseudouridine synthase D | chromosome | CDS | 902103 | 996 | + | 0.574297 |
NA | XF2649 | peptide chain release factor 1 | chromosome | CDS | 2534227 | 1086 | + | 0.566298 |
NA | XF2641 | GTP-binding protein | chromosome | CDS | 2526040 | 1092 | - | 0.492674 |
NA | XF0110 | 50S ribosomal protein L19 | chromosome | CDS | 108071 | 411 | + | 0.50365 |
NA | XF1856 | aspartyl-tRNA synthetase | chromosome | CDS | 1773425 | 1770 | - | 0.523164 |
NA | XF1165 | 30S ribosomal protein S14 | chromosome | CDS | 1115633 | 306 | + | 0.437909 |
NA | XF2553 | initiation factor eIF-2B, alpha subunit-related | chromosome | CDS | 2432210 | 1065 | - | 0.598122 |
NA | XF1157 | 50S ribosomal protein L22 | chromosome | CDS | 1112385 | 336 | + | 0.452381 |
NA | XF2580 | 30S ribosomal protein S2 | chromosome | CDS | 2458584 | 801 | - | 0.539326 |
NA | XF2203 | elongation factor P | chromosome | CDS | 2090106 | 570 | + | 0.549123 |
NA | XF1174 | 30S ribosomal protein S11 | chromosome | CDS | 1120715 | 393 | + | 0.440204 |
NA | XF0906 | conserved hypothetical protein | chromosome | CDS | 873404 | 1494 | - | 0.558233 |
NA | XF0928 | conserved hypothetical protein | chromosome | CDS | 892311 | 1266 | + | 0.590837 |
NA | XF0174 | peptide chain release factor 3 | chromosome | CDS | 183329 | 1647 | + | 0.496053 |
NA | XF1956 | glutathione synthetase | chromosome | CDS | 1864428 | 945 | + | 0.537566 |
NA | XF0919 | conserved hypothetical protein | chromosome | CDS | 883569 | 564 | - | 0.58156 |
NA | XF1167 | 50S ribosomal protein L6 | chromosome | CDS | 1116510 | 528 | + | 0.433712 |
NA | XF1111 | peptide chain release factor 2 | chromosome | CDS | 1065781 | 1017 | + | 0.542773 |
NA | XF2304 | hypothetical protein | chromosome | CDS | 2189306 | 252 | + | 0.559524 |
NA | XF2561 | 30S ribosomal protein S6 | chromosome | CDS | 2444359 | 432 | - | 0.506944 |
NA | XF0741 | phenylalanyl-tRNA synthetase alpha chain | chromosome | CDS | 695069 | 1002 | + | 0.505988 |
NA | XF2643 | 50S ribosomal protein L25 | chromosome | CDS | 2527779 | 627 | - | 0.503987 |
NA | XF0237 | tRNA pseudouridine synthase B | chromosome | CDS | 249223 | 909 | + | 0.520352 |
NA | XF2631 | 30S ribosomal protein S12 | chromosome | CDS | 2510957 | 399 | - | 0.496241 |
NA | XF1407 | sigma-54 modulation protein | chromosome | CDS | 1357870 | 351 | - | 0.470085 |
NA | XF0107 | 30S ribosomal protein S16 | chromosome | CDS | 106195 | 261 | + | 0.544061 |
NA | XF2637 | 50S ribosomal protein L11 | chromosome | CDS | 2522463 | 477 | - | 0.480084 |
NA | XF0428 | tryptophanyl-tRNA synthetase | chromosome | CDS | 439143 | 1305 | + | 0.553257 |
NA | XF2148 | dimethyladenosine transferase | chromosome | CDS | 2039854 | 873 | + | 0.538373 |
NA | XF1972 | tRNA/rRNA methylase | chromosome | CDS | 1881802 | 447 | + | 0.552573 |
NA | XF2438 | 30S ribosomal protein S1 | chromosome | CDS | 2321391 | 1710 | - | 0.487719 |
NA | XF2579 | elongation factor Ts | chromosome | CDS | 2457517 | 900 | - | 0.494444 |
NA | XF1171 | 50S ribosomal protein L15 | chromosome | CDS | 1118381 | 450 | + | 0.457778 |
NA | XF1160 | 50S ribosomal protein L29 | chromosome | CDS | 1113877 | 198 | + | 0.39899 |
NA | XF1534 | 50S ribosomal protein L31 | chromosome | CDS | 1492333 | 243 | + | 0.423868 |
NA | XF2640 | elongation factor Tu | chromosome | CDS | 2524305 | 1191 | - | 0.508816 |
NA | XF2630 | 30S ribosomal protein S7 | chromosome | CDS | 2510474 | 468 | - | 0.474359 |
NA | XF2606 | pseudouridylate synthase | chromosome | CDS | 2485339 | 993 | - | 0.53575 |
NA | XF2634 | 50S ribosomal protein L7/L12 | chromosome | CDS | 2520307 | 369 | - | 0.460705 |
NA | XF1440 | tRNA methyltransferase | chromosome | CDS | 1384090 | 1140 | - | 0.551754 |
NA | XF1166 | 30S ribosomal protein S8 | chromosome | CDS | 1116097 | 399 | + | 0.403509 |
NA | XF1314 | S-adenosylmethionine: tRNA ribosyltransferase-isomerase | chromosome | CDS | 1264867 | 1044 | + | 0.508621 |
NA | XF0591 | virulence factor | chromosome | CDS | 569473 | 723 | - | 0.578147 |
NA | XF2635 | 50S ribosomal protein L10 | chromosome | CDS | 2520730 | 417 | - | 0.477218 |
NA | XF1338 | glutaminyl-tRNA synthetase | chromosome | CDS | 1287414 | 1743 | - | 0.561675 |
NA | XF0926 | polypeptide deformylase | chromosome | CDS | 890749 | 513 | + | 0.538012 |
NA | XF1051 | ribosome recycling factor | chromosome | CDS | 1011205 | 558 | - | 0.503584 |
NA | XF1154 | 50S ribosomal protein L23 | chromosome | CDS | 1110945 | 312 | + | 0.410256 |
NA | XF0095 | conserved hypothetical protein | chromosome | CDS | 94948 | 306 | + | 0.48366 |
NA | XF1368 | adenine-specific methylase | chromosome | CDS | 1315128 | 939 | + | 0.549521 |
NA | XF0147 | arginyl-tRNA synthetase | chromosome | CDS | 149378 | 1761 | - | 0.536627 |
NA | XF1151 | 30S ribosomal protein S10 | chromosome | CDS | 1109361 | 312 | + | 0.471154 |
NA | XF1112 | lysyl-tRNA synthetase | chromosome | CDS | 1066981 | 1521 | + | 0.530572 |
NA | XF1505 | ribonuclease PH | chromosome | CDS | 1456113 | 726 | + | 0.573003 |
NA | XF1156 | 30S ribosomal protein S19 | chromosome | CDS | 1112103 | 270 | + | 0.396296 |
NA | XF2781 | ribonuclease P | chromosome | CDS | 2678619 | 429 | - | 0.440559 |
NA | XF2642 | peptidyl tRNA hydrolase | chromosome | CDS | 2527145 | 579 | - | 0.492228 |
NA | XF2473 | elongation factor P | chromosome | CDS | 2356707 | 582 | - | 0.522337 |
NA | XF0387 | conserved hypothetical protein | chromosome | CDS | 399121 | 1023 | + | 0.511241 |
NA | XF0235 | initiation factor IF-2 | chromosome | CDS | 245969 | 2679 | + | 0.522956 |
NA | XF2563 | asparaginyl-tRNA synthetase | chromosome | CDS | 2445579 | 1401 | + | 0.545325 |
NA | XF1012 | conserved hypothetical protein | chromosome | CDS | 972969 | 504 | - | 0.625 |
NA | XF0192 | ATP-dependent RNA helicase | chromosome | CDS | 201673 | 1341 | + | 0.522744 |
NA | XF1207 | 50S ribosomal protein L33 | chromosome | CDS | 1157336 | 165 | + | 0.436364 |
NA | XF1093 | hypothetical protein | chromosome | CDS | 1047305 | 486 | - | 0.49177 |
NA | XF0740 | 50S ribosomal protein L20 | chromosome | CDS | 694438 | 360 | + | 0.494444 |
NA | XF0927 | methionyl-tRNA formyltransferase | chromosome | CDS | 891367 | 924 | + | 0.593074 |
NA | XF0108 | 16S rRNA processing protein | chromosome | CDS | 106499 | 513 | + | 0.516569 |
NA | XF0737 | initiation factor IF-3 | chromosome | CDS | 693490 | 480 | + | 0.495833 |
NA | XF1125 | ribonuclease G | chromosome | CDS | 1083317 | 1494 | + | 0.522088 |
NA | XF1537 | 50S ribosomal protein L13 | chromosome | CDS | 1494708 | 429 | - | 0.526807 |
NA | XF0445 | prolyl-tRNA synthetase | chromosome | CDS | 453658 | 1749 | + | 0.502001 |
NA | XF2629 | elongation factor G | chromosome | CDS | 2508220 | 2118 | - | 0.471199 |
NA | XF2607 | ribonuclease E | chromosome | CDS | 2486732 | 3399 | + | 0.504266 |
NA | XF2696 | ATP-dependent RNA helicase | chromosome | CDS | 2574884 | 1635 | - | 0.519878 |
NA | XF0111 | methionine aminopeptidase | chromosome | CDS | 108906 | 780 | + | 0.529487 |
NA | XF1711 | conserved hypothetical protein | chromosome | CDS | 1630703 | 354 | + | 0.531073 |
NA | XF1175 | 30S ribosomal protein S4 | chromosome | CDS | 1121122 | 627 | + | 0.427432 |
NA | XF2424 | 50S ribosomal protein L21 | chromosome | CDS | 2304925 | 321 | - | 0.520249 |
NA | XF1152 | 50S ribosomal protein L3 | chromosome | CDS | 1109702 | 633 | + | 0.470774 |
NA | XF1206 | 50S ribosomal protein L28 | chromosome | CDS | 1157086 | 237 | + | 0.531646 |
NA | XF0434 | 30S ribosomal protein S21 | chromosome | CDS | 444587 | 216 | - | 0.527778 |
NA | XF0252 | ATP-dependent RNA helicase | chromosome | CDS | 262848 | 1845 | - | 0.568022 |
NA | XF1959 | glycyl-tRNA synthetase beta chain | chromosome | CDS | 1867554 | 2169 | - | 0.509451 |
NA | XF0094 | cell division protein | chromosome | CDS | 94237 | 642 | - | 0.493769 |
NA | XF1168 | 50S ribosomal protein L18 | chromosome | CDS | 1117152 | 333 | + | 0.477477 |
NA | XF0236 | ribosomal-binding factor A | chromosome | CDS | 248755 | 378 | + | 0.505291 |
NA | XF2782 | 50S ribosomal protein L34 | chromosome | CDS | 2679085 | 141 | - | 0.482269 |
NA | XF1177 | 50S ribosomal protein L17 | chromosome | CDS | 1122931 | 381 | + | 0.448819 |
NA | XF0995 | cysteinyl-tRNA synthetase | chromosome | CDS | 952570 | 1425 | - | 0.590877 |
NA | XF0353 | translation initiation inhibitor | chromosome | CDS | 360245 | 384 | + | 0.557292 |
NA | XF1971 | hypothetical protein | chromosome | CDS | 1881257 | 312 | - | 0.522436 |
NA | XF0739 | 50S ribosomal protein L35 | chromosome | CDS | 694230 | 198 | + | 0.520202 |
NA | XF0239 | polynucleotide phosphorylase | chromosome | CDS | 250660 | 2160 | + | 0.498611 |
NA | XF1153 | 50S ribosomal protein L4 | chromosome | CDS | 1110349 | 609 | + | 0.45977 |
NA | XF1173 | 30S ribosomal protein S13 | chromosome | CDS | 1120343 | 357 | + | 0.456583 |
NA | XF1200 | ribosomal small subunit pseudouridine synthase | chromosome | CDS | 1153699 | 711 | + | 0.527426 |
NA | XF0238 | 30S ribosomal protein S15 | chromosome | CDS | 250302 | 261 | + | 0.452107 |
NA | XF2421 | 30S ribosomal protein S20 | chromosome | CDS | 2302956 | 330 | + | 0.484848 |
NA | XF1164 | 50S ribosomal protein L5 | chromosome | CDS | 1115077 | 540 | + | 0.409259 |
NA | XF1158 | 30S ribosomal protein S3 | chromosome | CDS | 1112739 | 720 | + | 0.448611 |
NA | XF2453 | conserved hypothetical protein | chromosome | CDS | 2339573 | 1431 | + | 0.556254 |
NA | XF1169 | 30S ribosomal protein S5 | chromosome | CDS | 1117660 | 540 | + | 0.442593 |
NA | XF2560 | 30S ribosomal protein S18 | chromosome | CDS | 2444117 | 231 | - | 0.450216 |
NA | XF1985 | tRNA/rRNA methyltransferase | chromosome | CDS | 1898181 | 750 | - | 0.546667 |
NA | XF2423 | 50S ribosomal protein L27 | chromosome | CDS | 2304644 | 258 | - | 0.51938 |
NA | XF1163 | 50S ribosomal protein L24 | chromosome | CDS | 1114748 | 318 | + | 0.408805 |
NA | XF2475 | tRNA/rRNA methyltransferase | chromosome | CDS | 2358529 | 846 | - | 0.568558 |
NA | XF0124 | alanyl-tRNA synthetase | chromosome | CDS | 120812 | 2751 | + | 0.528172 |
NA | XF0227 | polynucleotide adenyltransferase | chromosome | CDS | 236195 | 1266 | + | 0.532385 |
NA | XF2559 | 50S ribosomal protein L9 | chromosome | CDS | 2443510 | 450 | - | 0.544444 |
NA | XF0109 | tRNA (guanine-N1-)-methyltransferase | chromosome | CDS | 107121 | 786 | + | 0.533079 |
NA | XF0736 | threonyl-tRNA synthetase | chromosome | CDS | 691467 | 1908 | + | 0.514675 |
NA | XF1170 | 50S ribosomal protein L30 | chromosome | CDS | 1118219 | 162 | + | 0.450617 |
NA | XF2628 | elongation factor Tu | chromosome | CDS | 2506923 | 1191 | - | 0.508816 |
NA | XF1512 | protoporphyrinogen oxidase | chromosome | CDS | 1463188 | 828 | - | 0.588164 |
NA | XF1159 | 50S ribosomal protein L16 | chromosome | CDS | 1113464 | 414 | + | 0.449275 |
NA | XF2555 | lysyl-tRNA synthetase | chromosome | CDS | 2434326 | 906 | - | 0.578366 |
NA | XF1162 | 50S ribosomal protein L14 | chromosome | CDS | 1114364 | 369 | + | 0.444444 |
NA | XF1536 | 30S ribosomal protein S9 | chromosome | CDS | 1494311 | 393 | - | 0.506361 |
NA | XF0549 | methionyl-tRNA synthetase | chromosome | CDS | 535409 | 2109 | - | 0.568042 |
NA | XF0169 | tyrosyl-tRNA synthetase | chromosome | CDS | 170444 | 1257 | + | 0.471758 |
NA | XF1161 | 30S ribosomal protein S17 | chromosome | CDS | 1114071 | 270 | + | 0.385185 |
NA | XF2358 | RNA methyltransferase | chromosome | CDS | 2233427 | 1332 | - | 0.526276 |
NA | XF2201 | ribosomal protein L11 methyltransferase | chromosome | CDS | 2088499 | 978 | + | 0.610429 |
NA | XF1960 | glycyl-tRNA synthetase alpha chain | chromosome | CDS | 1869815 | 924 | - | 0.525974 |
NA | XF0936 | hypothetical protein | chromosome | CDS | 899631 | 1131 | + | 0.514589 |
NA | XF1155 | 50S ribosomal protein L2 | chromosome | CDS | 1111268 | 828 | + | 0.464976 |
NA | XF2345 | outer membrane protein | chromosome | CDS | 2225042 | 438 | + | 0.468037 |
NA | XF2440 | 50S ribosomal protein L36 | chromosome | CDS | 2324214 | 126 | + | 0.484127 |
NA | XF1445 | initiation factor IF-1 | chromosome | CDS | 1388920 | 219 | - | 0.43379 |
NA | XF0751 | ribonuclease D | chromosome | CDS | 703411 | 1089 | - | 0.528926 |
NA | XF2636 | 50S ribosomal protein L1 | chromosome | CDS | 2521760 | 699 | - | 0.446352 |
NA | XF2418 | isoleucyl-tRNA synthetase | chromosome | CDS | 2297370 | 2832 | - | 0.589336 |
NA | XF0223 | queuine tRNA-ribosyltransferase | chromosome | CDS | 231285 | 1212 | + | 0.544554 |
NA | XF1816 | 50S ribosomal protein L32 | chromosome | CDS | 1730829 | 195 | + | 0.492308 |
NA | XF0134 | valyl-tRNA synthetase | chromosome | CDS | 132265 | 2985 | - | 0.594975 |
NA | XF1362 | tRNA adenylyltransferase | chromosome | CDS | 1309661 | 1251 | - | 0.547562 |
NA | XF1373 | tRNA pseudouridine synthase A | chromosome | CDS | 1320613 | 774 | + | 0.569767 |
NA | XF0692 | hypothetical protein | chromosome | CDS | 660048 | 390 | - | 0.466667 |