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2024-05-05 18:35:36

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Streptomyces avermitilis MA-4680, MA-4680

Number of genes found: 224

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Streptomyces avermitilis MA-4680, MA-4680
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA SAV3207 putative GTP binding proteinchromosome CDS3998574 1089 - 0.666667
NA SAV6244 hypothetical proteinchromosome CDS7501884 588 - 0.712585
NA SAV7450 hypothetical proteinchromosome CDS8880199 402 - 0.726368
NA SAV6290 hypothetical proteinchromosome CDS7549900 948 - 0.725738
NA SAV3964 putative guanyltransferasechromosome CDS4889067 732 + 0.711749
NA SAV3416 putative secreted proteinchromosome CDS4237848 582 - 0.733677
NA SAV2849 hypothetical proteinchromosome CDS3492899 345 - 0.663768
NA SAV4235 hypothetical proteinchromosome CDS5192478 3207 - 0.696601
NA SAV6685 putative proteasome componentchromosome CDS7997032 1362 + 0.655653
NA SAV6037 hypothetical proteinchromosome CDS7267507 279 + 0.673835
NA SAV6870 hypothetical proteinchromosome CDS8199842 324 + 0.666667
NA SAV6159 hypothetical proteinchromosome CDS7405326 333 + 0.672673
NA SAV995 hypothetical proteinchromosome CDS1261279 435 - 0.68046
NA SAV5366 hypothetical proteinchromosome CDS6506611 1416 + 0.70904
NA SAV1896 putative acetyltransferasechromosome CDS2318593 543 - 0.701657
NA SAV6707 putative ribosomal pseudouridine synthasechromosome CDS8022004 966 - 0.727743
NA SAV3242 putative acetyltransferasechromosome CDS4039968 507 - 0.696252
NA SAV6674 hypothetical proteinchromosome CDS7986121 903 + 0.712071
NA SAV6133 putative ribosomal large subunit pseudouridine synthasechromosome CDS7377080 945 + 0.710053
NA SAV2911 putative methyltransferasechromosome CDS3642242 882 - 0.717687
NA SAV4170 putative aceytltranferasechromosome CDS5118812 615 - 0.708943
NA SAV3946 hypothetical proteinchromosome CDS4871149 429 - 0.717949
NA SAV5465 hypothetical proteinchromosome CDS6631806 4164 + 0.741595
NA SAV3593 hypothetical proteinchromosome CDS4449642 456 + 0.565789
NA SAV211 hypothetical proteinchromosome CDS246027 627 - 0.706539
NA SAV3115 putative serine proteasechromosome CDS3887910 1860 - 0.742473
NA SAV75 putative endoribonuclease L-PSPchromosome CDS85042 390 + 0.671795
NA SAV703 putative acetyltransferasechromosome CDS858470 564 + 0.677305
NA SAV4446 putative ATP-dependent RNA helicasechromosome CDS5431916 1533 - 0.742335
NA SAV2305 hypothetical proteinchromosome CDS2807844 399 - 0.729323
NA SAV6797 putative rRNA methylasechromosome CDS8117274 819 + 0.697192
NA SAV6241 hypothetical proteinchromosome CDS7499778 639 - 0.726135
NA SAV2465 hypothetical proteinchromosome CDS3007876 1134 - 0.731922
NA SAV4834 putative acetyltransferasechromosome CDS5876638 507 - 0.714004
NA SAV5919 hypothetical proteinchromosome CDS7131857 999 + 0.742743
NA SAV6275 putative export associated proteinchromosome CDS7531487 2088 + 0.747605
NA SAV6878 putative RNA-binding Sun proteinchromosome CDS8209360 1431 + 0.751223
NA SAV6793 putative acetyltransferasechromosome CDS8109643 639 + 0.682316
NA SAV4618 putative rRNA or tRNA methyltransferasechromosome CDS5636158 1590 + 0.737736
NA SAV2479 putative methylase of isopentenylated A37 derivatives in tRNAchromosome CDS3026318 1527 - 0.693517
NA SAV6496 putative rRNA methylasechromosome CDS7779615 816 + 0.71201
NA SAV7194 putative methyltransferaschromosome CDS8569752 666 + 0.746246
NA SAV4588 hypothetical proteinchromosome CDS5602812 471 + 0.721868
NA SAV7054 putative ATP-dependent RNA helicasechromosome CDS8412224 1497 + 0.720107
NA SAV5070 putative acetyltransferasechromosome CDS6145429 570 - 0.691228
NA SAV3892 hypothetical proteinchromosome CDS4808237 573 - 0.755672
NA SAV1293 putative methytransferasechromosome CDS1602176 819 - 0.741148
NA SAV4155 putative ATP-dependent RNA helicasechromosome CDS5103407 1509 + 0.727634
NA SAV2508 hypothetical proteinchromosome CDS3057393 1488 - 0.709005
NA SAV6708 putative acetyltransferasechromosome CDS8023104 603 + 0.746269
NA SAV5067 hypothetical proteinchromosome CDS6142323 861 + 0.679443
NA SAV4385 hypothetical proteinchromosome CDS5365817 234 - 0.722222
NA SAV3565 hypothetical proteinchromosome CDS4414835 513 + 0.719298
NA SAV6697 putative amidase family proteinchromosome CDS8009625 1653 - 0.753176
NA SAV3966 putative tRNA/rRNA methyltransferasechromosome CDS4891822 942 - 0.731422
NA SAV5232 putative amidasechromosome CDS6339980 1443 - 0.741511
NA SAV4401 putative acetyltransferasechromosome CDS5382545 534 - 0.707865
NA SAV3056 hypothetical proteinchromosome CDS3818730 549 + 0.724954
NA SAV3278 hypothetical proteinchromosome CDS4079800 420 - 0.692857
NA SAV6255 hypothetical proteinchromosome CDS7512494 816 + 0.688725
NA SAV548 hypothetical proteinchromosome CDS693265 1170 - 0.67265
NA SAV6564 hypothetical proteinchromosome CDS7856147 519 - 0.707129
NA SAV3850 putative transcriptional regulatorchromosome CDS4755648 1386 - 0.735931
NA SAV384 hypothetical proteinchromosome CDS456005 897 + 0.77146
NA SAV5423 hypothetical proteinchromosome CDS6574704 771 - 0.653696
NA SAV1233 hypothetical proteinchromosome CDS1529952 1098 + 0.721311
NA SAV2389 putative RNA methyltransferasechromosome CDS2914573 1302 - 0.721966
NA SAV2910 hypothetical proteinchromosome CDS3641542 648 - 0.714506
NA SAV4429 hypothetical proteinchromosome CDS5413105 303 + 0.653465
NA SAV4027 putative D-tyrosyl-tRNA(Tyr) deacylase-like proteinchromosome CDS4948672 438 + 0.700913
NA SAV2742 putative acetyltransferasechromosome CDS3368140 576 - 0.711806
NA SAV820 hypothetical proteinchromosome CDS971806 291 - 0.687285
NA SAV758 putative acetyltransferasechromosome CDS910889 606 - 0.658416
NA SAV5258 hypothetical proteinchromosome CDS6371369 609 - 0.763547
NA SAV7047 hypothetical proteinchromosome CDS8405182 552 + 0.722826
NA SAV1940 hypothetical proteinchromosome CDS2373980 432 - 0.68287
NA SAV4492 hypothetical proteinchromosome CDS5487794 1233 - 0.70073
NA SAV4123 putative ATP-dependent RNA helicasechromosome CDS5057467 2244 - 0.707665
alaS SAV6850 putative alanyl-tRNA synthetasechromosome CDS8175574 2673 + 0.689113
amiE1 SAV7269 putative amidasechromosome CDS8668562 1365 - 0.756777
amiE2 SAV7345 putative amidasechromosome CDS8760992 1515 - 0.766997
argS1 SAV2920 putative arginyl-tRNA synthetasechromosome CDS3654002 1059 - 0.74221
argS2 SAV4748 putative arginyl-tRNA synthetasechromosome CDS5788728 1773 - 0.680767
aspS SAV4395 putative aspartyl-tRNA synthetasechromosome CDS5377024 1764 + 0.679138
cdd1 SAV590 putative cytidine/deoxycytidine deaminasechromosome CDS746196 438 + 0.719178
cdd3 SAV4180 putative cytidine/deoxycytidine deaminasechromosome CDS5129204 429 + 0.745921
cdd4 SAV4806 putative cytidine/deoxycytidine deaminasechromosome CDS5848403 462 - 0.71645
cvnA11 SAV6958 putative sensor-like histidine kinasechromosome CDS8302609 2841 + 0.721577
cvnA6 SAV2694 putative sensor-like histidine kinasechromosome CDS3300359 3837 + 0.731822
cysS SAV3967 putative cysteinyl-tRNA synthetasechromosome CDS4892866 1401 - 0.692363
def1 SAV3033 putative polypeptide deformylasechromosome CDS3791551 651 - 0.695853
def2 SAV7126 putative polypeptide deformylasechromosome CDS8486898 561 + 0.700535
def3 SAV7349 putative polypeptide deformylasechromosome CDS8766187 675 - 0.76
dus SAV5649 putative dihydrouridine synthasechromosome CDS6829246 1206 + 0.711443
efp SAV6859 putative elongation factor Pchromosome CDS8187035 567 + 0.64903
eif1 SAV5062 putative initiation factor eIF-2B alpha subunitchromosome CDS6135405 1149 + 0.721497
eif2 SAV6658 putative initiation factor eIF-2B alpha subunitchromosome CDS7963968 1041 + 0.73391
fmt SAV6877 putative methionyl-tRNA formyltransferasechromosome CDS8207585 933 + 0.722401
frr SAV2624 putative ribosome recycling factorchromosome CDS3223806 558 - 0.650538
fusA1 SAV4919 putative translation elongation factor Gchromosome CDS5979033 2130 + 0.652582
fusA2 SAV6825 putative translation elongation factor Gchromosome CDS8147772 2199 - 0.718963
fusA3 SAV1799 putative translation elongation factor Gchromosome CDS2195380 2091 - 0.733142
gatA SAV2745 putative glutamyl-tRNA amidotransferase subunit Achromosome CDS3370832 1506 - 0.706507
gatB SAV2743 putative glutamyl-tRNA amidotransferase subunit Bchromosome CDS3369059 1518 - 0.698946
gatC SAV2746 putative glutamyl-tRNA amidotransferase subunit Cchromosome CDS3372343 297 - 0.703704
gltS SAV2691 putative glutamyl-tRNA synthetasechromosome CDS3297120 1515 - 0.691749
glyS SAV5635 putative glycyl-tRNA synthetasechromosome CDS6813890 1383 + 0.671728
hisS SAV6844 putative histidyl-tRNA synthetasechromosome CDS8169763 1263 + 0.699129
hypX SAV7365 putative [NiFe] hydrogenase maturationchromosome CDS8793210 1842 + 0.721498
ileS SAV6130 putative isoleucyl-tRNA synthetasechromosome CDS7371348 3144 - 0.692748
infA1 SAV4949 putative translation initiation factor IF-1chromosome CDS6000287 222 + 0.594595
infA2 SAV504 putative translation initiation factor IF-1chromosome CDS646906 225 - 0.604444
infB SAV2551 putative translation initiation factor IF-2chromosome CDS3128920 3141 - 0.721108
infC SAV6737 putative translation initiation factor IF-3chromosome CDS8054233 726 + 0.657025
ksgA SAV3587 putative dimethyladenosine transferasechromosome CDS4440310 888 - 0.73536
leuS SAV5488 putative leucyl-tRNA synthetasechromosome CDS6661895 2889 + 0.694358
lysS1 SAV4749 putative lysyl-tRNA synthetasechromosome CDS5790745 1647 + 0.70674
lysS2 SAV7296 putative lysyl-tRNA synthetasechromosome CDS8700179 3282 + 0.719683
map1 SAV1956 putative methionine aminopeptidasechromosome CDS2392839 786 + 0.737913
map2 SAV1974 putative methionine aminopeptidasechromosome CDS2411322 768 - 0.6875
map3 SAV4948 putative methionine aminopeptidasechromosome CDS5999283 837 + 0.695341
map4 SAV5931 putative methionine aminopeptidasechromosome CDS7142715 858 - 0.68648
metS SAV4403 putative methionyl-tRNA synthetasechromosome CDS5383799 1725 - 0.677101
miaA SAV2475 putative delta(2)-isopentenylpyrophosphate tRNA-adenosine transferasechromosome CDS3023598 939 - 0.719915
mpg1 SAV358 putative mannose-1-phosphate guanyltransferasechromosome CDS423399 714 + 0.676471
mpg2 SAV1013 putative mannose-1-phosphate guanyltransferasechromosome CDS1281049 714 + 0.683473
mpg3 SAV6977 putative mannose-1-phosphate guanyltransferasechromosome CDS8334639 2496 + 0.661859
mshC SAV6647 putative ATP-dependent l-cysteine: 1D-myo-inositoyl 2-amino-2-deoxy-alpha-D-glucopyranoside ligasechromosome CDS7950762 1230 + 0.722764
pcnA SAV4299 putative RNA nucleotidyltransferasechromosome CDS5266959 1443 - 0.676369
pheS SAV6742 putative phenylalanyl-tRNA synthetase alpha subunitchromosome CDS8058206 1083 + 0.698984
pnp SAV2523 putative polyribonucleotide nucleotidyltransferasechromosome CDS3086850 2217 - 0.682454
prfA SAV2912 putative peptide chain release factor 1chromosome CDS3643170 1077 - 0.687094
prfB SAV5102 putative peptide chain release factor 2chromosome CDS6196323 1107 + 0.67028
proS1 SAV2558 putative prolyl-tRNA synthetasechromosome CDS3136889 1695 - 0.710324
proS2 SAV2646 putative prolyl-tRNA synthetase (eukaryote type)chromosome CDS3241855 1416 - 0.69774
pth SAV3564 putative peptidyl-tRNA hydrolasechromosome CDS4414139 612 + 0.678105
queA SAV6474 putative S-adenosylmethionine:tRNA ribosyltransferase-isomerasechromosome CDS7753933 1233 - 0.72425
rbfA SAV2549 putative ribosome-binding factorchromosome CDS3127966 474 - 0.721519
rhlE SAV3098 putative ATP-dependent RNA helicasechromosome CDS3871098 2280 + 0.749123
rimJ SAV3669 putative ribosomal-protein-alanine N-acetyltransferasechromosome CDS4544195 471 - 0.711253
rimM SAV2642 putative 16S rRNA processing proteinchromosome CDS3239375 561 - 0.691622
rluB SAV6512 putative pseudouridine synthasechromosome CDS7801201 1071 + 0.704949
rmlA SAV5037 putative nucleotide phosphorylasechromosome CDS6098346 1083 + 0.720222
rnd SAV2231 putative ribonuclease Dchromosome CDS2710371 1281 + 0.748634
rnpA SAV4314 putative RNase P componentchromosome CDS5285022 372 - 0.701613
rphA SAV5170 putative ribonuclease PHchromosome CDS6277137 735 + 0.703401
rplA SAV4911 putative ribosomal protein L1chromosome CDS5966625 726 + 0.676309
rplB SAV4929 putative ribosomal protein L2chromosome CDS5989235 837 + 0.686977
rplC SAV4926 putative ribosomal protein L3chromosome CDS5987464 645 + 0.666667
rplD SAV4927 putative ribosomal protein L4chromosome CDS5988114 666 + 0.678679
rplE SAV4938 putative ribosomal protein L5chromosome CDS5993314 558 + 0.641577
rplF SAV4941 putative ribosomal protein L6chromosome CDS5994697 540 + 0.638889
rplI SAV4286 putative ribosomal protein L9chromosome CDS5253458 447 - 0.671141
rplJ SAV4912 putative ribosomal protein L10chromosome CDS5967982 531 + 0.649718
rplK SAV4910 putative ribosomal protein L11chromosome CDS5966111 435 + 0.655172
rplL SAV4913 putative ribosomal protein L7/L12chromosome CDS5968622 384 + 0.679688
rplM SAV4957 putative ribosomal protein L13chromosome CDS6005829 444 + 0.637387
rplN SAV4936 putative ribosomal protein L14chromosome CDS5992620 369 + 0.639566
rplO SAV4945 putative ribosomal protein L15chromosome CDS5996458 456 + 0.664474
rplP SAV4933 putative ribosomal protein L16chromosome CDS5991589 420 + 0.652381
rplQ SAV4954 putative ribosomal protein L17chromosome CDS6003114 504 + 0.688492
rplR SAV4942 putative ribosomal protein L18chromosome CDS5995240 384 + 0.65625
rplS SAV2640 putative ribosomal protein L19chromosome CDS3238041 351 - 0.666667
rplT SAV6739 putative ribosomal protein L20chromosome CDS8055355 384 + 0.671875
rplU SAV5467 putative ribosomal protein L21chromosome CDS6637749 321 + 0.623053
rplV SAV4931 putative ribosomal protein L22chromosome CDS5990408 348 + 0.678161
rplW SAV4928 putative ribosomal protein L23chromosome CDS5988779 417 + 0.64988
rplX SAV4937 putative ribosomal protein L24chromosome CDS5992991 324 + 0.632716
rplY SAV3563 putative ribosomal protein L25chromosome CDS4413467 594 + 0.695286
rpmA SAV5468 putative ribosomal protein L27chromosome CDS6638084 255 + 0.670588
rpmB1 SAV2675 putative ribosomal protein L28chromosome CDS3283164 186 + 0.677419
rpmB2 SAV4642 putative ribosomal protein L28chromosome CDS5668528 222 - 0.716216
rpmC SAV4934 putative ribosomal protein L29chromosome CDS5992008 225 + 0.648889
rpmD SAV4944 putative ribosomal protein L30chromosome CDS5996273 183 + 0.612022
rpmE1 SAV1572 putative ribosomal protein L31chromosome CDS1936716 276 + 0.692029
rpmE2 SAV2913 putative ribosomal protein L31chromosome CDS3644421 222 - 0.662162
rpmE3 SAV4644 putative ribosomal protein L31chromosome CDS5669005 249 + 0.686747
rpmF SAV2666 putative ribosomal protein L32chromosome CDS3269181 174 - 0.66092
rpmG1 SAV4643 putative ribosomal protein L33chromosome CDS5668835 165 + 0.648485
rpmG2 SAV4900 putative ribosomal protein L33chromosome CDS5956882 165 + 0.624242
rpmH SAV4315 putative ribosomal protein L34chromosome CDS5285412 138 - 0.710145
rpmI SAV6738 putative ribosomal protein L35chromosome CDS8055065 195 + 0.661538
rpmJ SAV4950 putative ribosomal protein L36chromosome CDS6000568 114 + 0.622807
rpsA SAV6233 putative ribosomal protein S1chromosome CDS7492899 1506 + 0.65405
rpsB SAV2627 putative ribosomal protein S2chromosome CDS3226409 927 - 0.688242
rpsC SAV4932 putative ribosomal protein S3chromosome CDS5990755 828 + 0.678744
rpsD SAV6847 putative ribosomal protein S4chromosome CDS8173971 615 + 0.686179
rpsE SAV4943 putative ribosomal protein S5chromosome CDS5995665 606 + 0.69802
rpsF SAV4289 putative ribosomal protein S6chromosome CDS5254905 291 - 0.61512
rpsG SAV4918 putative ribosomal protein S7chromosome CDS5978523 471 + 0.647558
rpsH SAV4940 putative ribosomal protein S8chromosome CDS5994274 399 + 0.629073
rpsI SAV4958 putative ribosomal protein S9chromosome CDS6006315 522 + 0.67433
rpsJ SAV4925 putative ribosomal protein S10chromosome CDS5987138 309 + 0.618123
rpsK SAV4952 putative ribosomal protein S11chromosome CDS6001363 405 + 0.688889
rpsL SAV4917 putative ribosomal protein S12chromosome CDS5978149 372 + 0.634409
rpsM SAV4951 putative ribosomal protein S13chromosome CDS6000885 381 + 0.656168
rpsN1 SAV4939 putative ribosomal protein S14chromosome CDS5993877 186 + 0.645161
rpsN2 SAV4641 putative ribosomal protein S14chromosome CDS5668223 306 - 0.702614
rpsO SAV2524 putative ribosomal protein S15chromosome CDS3089414 288 - 0.666667
rpsP SAV2644 putative ribosomal protein S16chromosome CDS3240286 429 - 0.668998
rpsQ SAV4935 putative ribosomal protein S17chromosome CDS5992232 285 + 0.638596
rpsR1 SAV4287 putative ribosomal protein S18chromosome CDS5253923 237 - 0.616034
rpsR2 SAV4646 putative ribosomal protein S18chromosome CDS5670601 237 + 0.687764
rpsS SAV4930 putative ribosomal protein S19chromosome CDS5990084 282 + 0.617021
rpsT SAV5560 putative ribosomal protein S20chromosome CDS6724561 267 - 0.636704
rsmC SAV1444 putative ribosomal RNA small subunit methyltransferasechromosome CDS1778763 1143 + 0.71741
serS1 SAV4244 putative seryl-tRNA synthetasechromosome CDS5204797 1278 + 0.697183
serS2 SAV2294 putative seryl-tRNA synthetasechromosome CDS2795948 1284 + 0.740654
sidB SAV5270 putative aceytltranferasechromosome CDS6384950 552 - 0.675725
tetM SAV7507 putative tetracycline resistance proteinchromosome CDS8948716 1992 + 0.696787
thrS SAV6822 putative threonyl-tRNA synthetasechromosome CDS8142864 1977 + 0.671725
trmD SAV2641 putative RNA (guanine-N1)-methyltransferasechromosome CDS3238527 849 - 0.697291
trmU SAV2753 putative tRNA (5-methylaminomethyl-2-thiouridine)-methyltransferasechromosome CDS3380608 1131 - 0.727675
trpS1 SAV3417 putative tryptophanyl-tRNA synthetasechromosome CDS4238566 1014 - 0.669625
trpS2 SAV4725 putative tryptophanyl-tRNA synthetasechromosome CDS5757496 996 - 0.690763
truA SAV4955 putative pseudouridine synthasechromosome CDS6003707 858 + 0.708625
truB SAV2548 putative tRNA pseudouridine synthasechromosome CDS3127064 906 - 0.707506
tsf SAV2626 putative elongation factor EF-Tschromosome CDS3225476 837 - 0.679809
tsnR1 SAV4357 putative rRNA methyltransferasechromosome CDS5334379 750 + 0.734667
tsnR2 SAV6740 putative rRNA methyltransferasechromosome CDS8055796 927 + 0.737864
tuf1 SAV4920 putative elongation factor EF-Tuchromosome CDS5981306 1194 + 0.639866
tuf2 SAV7028 putative elongation factor EF-Tuchromosome CDS8388106 1173 + 0.716113
tyrS SAV6459 putative tyrosyl-tRNA synthetasechromosome CDS7736361 1269 - 0.685579
valS SAV5451 putative valyl-tRNA synthetasechromosome CDS6611757 2625 + 0.686095