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2024-05-09 10:48:02

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Chlamydophila pneumoniae J138, J138

Number of genes found: 120

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Chlamydophila pneumoniae J138, J138
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
CPj0045 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS60740 2208 + 0.424819
CPj0251 conserved hypothetical proteinRecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; EC=2.-.-.-; AltName: Full=Ribosome maturation factor RimO; chromosome CDS285682 1503 + 0.375915
CPj0379 CT053 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS426031 447 + 0.436242
CPj0576_1 peptide chain release factor 2RecName: Full=Peptide chain release factor 2; Short=RF-2; chromosome CDS665812 1053 - 0.421652
CPj0713 CT663 hypothetical proteinRecName: Full=Protein CPn_0713/CP_0033/CPj0713/CpB0740; chromosome CDS798650 393 - 0.396947
alaS alanyl tRNA synthetaseRecName: Full=Alanine--tRNA ligase; EC=6.1.1.7; AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS; chromosome CDS1020364 2619 - 0.424208
argS arginyl tRNA transferaseRecName: Full=Arginine--tRNA ligase; EC=6.1.1.19; AltName: Full=Arginyl-tRNA synthetase; Short=ArgRS; chromosome CDS658428 1686 + 0.412218
aspS aspartyl tRNA synthetaseRecName: Full=Aspartate--tRNA(Asp/Asn) ligase; EC=6.1.1.23; AltName: Full=Aspartyl-tRNA synthetase; Short=AspRS; AltName: Full=Non-discriminating aspartyl-tRNA synthetase; Short=ND-AspRS; chromosome CDS740490 1755 - 0.408547
cafE axial filament proteinSubName: Full=Axial filament protein; chromosome CDS1094145 1548 - 0.383075
ctc general stress proteinRecName: Full=50S ribosomal protein L25; AltName: Full=General stress protein CTC; chromosome CDS1085278 558 + 0.387097
cysS cysteinyl tRNA synthetaseRecName: Full=Cysteine--tRNA ligase; EC=6.1.1.16; AltName: Full=Cysteinyl-tRNA synthetase; Short=CysRS; chromosome CDS1065067 1425 - 0.422456
def polypeptide deformylaseRecName: Full=Peptide deformylase; Short=PDF; EC=3.5.1.88; AltName: Full=Polypeptide deformylase; chromosome CDS1218069 561 + 0.40107
efp_1 elongation factor PRecName: Full=Elongation factor P 1; Short=EF-P 1; chromosome CDS220841 558 - 0.37276
efp_2 elongation factor PRecName: Full=Elongation factor P 2; Short=EF-P 2; chromosome CDS1026309 573 + 0.425829
fmt methionyl tRNA formyltransferaseRecName: Full=Methionyl-tRNA formyltransferase; EC=2.1.2.9; chromosome CDS731028 966 - 0.447205
fmu RNA methyltransferaseSubName: Full=Fmu methyltransferase; SubName: Full=Nol1/Nop2/Sun family protein; SubName: Full=RNA Methyltransferase; SubName: Full=RNA methyltransferase; chromosome CDS754896 1095 - 0.410959
fusA elongation factor GRecName: Full=Elongation factor G; Short=EF-G; chromosome CDS632897 2085 - 0.416307
gatA Glu tRNA Gln amidotransferae (A subunit)RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit A; Short=Glu-ADT subunit A; EC=6.3.5.7; chromosome CDS895 1479 + 0.440838
gatB (Pet112) Glu tRNA Gln amidotransferase (B subunit)RecName: Full=Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Short=Asp/Glu-ADT subunit B; EC=6.3.5.-; chromosome CDS2370 1467 + 0.43013
gatC Glu-tRNA Gln amidotransferase (C subunit)RecName: Full=Glutamyl-tRNA(Gln) amidotransferase subunit C; Short=Glu-ADT subunit C; EC=6.3.5.-; chromosome CDS573 306 + 0.385621
gltX glutamyl-tRNA synthetaseRecName: Full=Glutamate--tRNA ligase; EC=6.1.1.17; AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS; chromosome CDS643416 1518 - 0.455204
glyQ glycyl tRNA synthetaseRecName: Full=Glycine--tRNA ligase; AltName: Full=Glycyl-tRNA synthetase; Short=GlyRS; EC=6.1.1.14; Includes: RecName: Full=Glycine--tRNA ligase alpha subunit; AltName: Full=Glycyl-tRNA synthetase alpha subunit; Includes: RecName: Full=Glycine--tRNA ligase beta subunit; AltName: Full=Glycyl-tRNA synthetase beta subunit; chromosome CDS1079091 3045 - 0.411823
hemK A/G specific methylaseSubName: Full=A/G specific methylase; SubName: Full=Modification methylase, HemK family; chromosome CDS146109 867 + 0.416378
hisS histidyl tRNA synthetaseRecName: Full=Histidine--tRNA ligase; EC=6.1.1.21; AltName: Full=Histidyl-tRNA synthetase; Short=HisRS; chromosome CDS742219 1293 - 0.411446
ileS isoleucyl-tRNA synthetaseRecName: Full=Isoleucine--tRNA ligase; EC=6.1.1.5; AltName: Full=Isoleucyl-tRNA synthetase; Short=IleRS; chromosome CDS138366 3132 + 0.393359
infA initiation factor IF-1RecName: Full=Translation initiation factor IF-1; chromosome CDS89026 222 + 0.427928
infB initiation factor-2RecName: Full=Translation initiation factor IF-2; chromosome CDS359703 2673 + 0.40853
infC initiation factor 3RecName: Full=Translation initiation factor IF-3; chromosome CDS1136289 561 + 0.379679
kgsA dimethyladenosine transferaseRecName: Full=Ribosomal RNA small subunit methyltransferase A; EC=2.1.1.182; AltName: Full=16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase; AltName: Full=16S rRNA dimethyladenosine transferase; AltName: Full=16S rRNA dimethylase; AltName: Full=S-adenosylmethionine-6-N, N-adenosyl(rRNA) dimethyltransferase; chromosome CDS1211182 834 + 0.417266
leuS leucyl tRNA synthetaseRecName: Full=Leucine--tRNA ligase; EC=6.1.1.4; AltName: Full=Leucyl-tRNA synthetase; Short=LeuRS; chromosome CDS195144 2463 + 0.426309
lysS lysyl tRNA synthetaseRecName: Full=Lysine--tRNA ligase; EC=6.1.1.6; AltName: Full=Lysyl-tRNA synthetase; Short=LysRS; chromosome CDS1063487 1584 + 0.410985
map methionine aminopeptidaseRecName: Full=Methionine aminopeptidase; Short=MAP; Short=MetAP; EC=3.4.11.18; AltName: Full=Peptidase M; chromosome CDS1154589 876 - 0.432648
metG methionyl-tRNA synthetaseRecName: Full=Methionine--tRNA ligase; EC=6.1.1.10; AltName: Full=Methionyl-tRNA synthetase; Short=MetRS; chromosome CDS151782 1656 + 0.398551
miaA tRNA pyrophosphate transferaseRecName: Full=tRNA dimethylallyltransferase; EC=2.5.1.75; AltName: Full=Dimethylallyl diphosphate:tRNA dimethylallyltransferase; Short=DMAPP:tRNA dimethylallyltransferase; Short=DMATase; AltName: Full=Isopentenyl-diphosphate:tRNA isopentenyltransferase; Short=IPP transferase; Short=IPPT; Short=IPTase; chromosome CDS1041300 1029 + 0.387755
pcnB_1 poly A polymeraseSubName: Full=Poly A Polymerase; SubName: Full=Poly A polymerase; SubName: Full=Poly(A) polymerase; SubName: Full=Poly(A) polymerase family protein; chromosome CDS956168 1233 - 0.420114
pcnB_2 poly A polymeraseSubName: Full=Poly A polymerase; SubName: Full=Poly(A) polymerase family protein; chromosome CDS1106094 1293 - 0.377417
pfrA peptide chain releasing factorRecName: Full=Peptide chain release factor 1; Short=RF-1; chromosome CDS145046 1074 + 0.40689
pheS phenylalanyl tRNA synthetase, alphaRecName: Full=Phenylalanine--tRNA ligase alpha subunit; EC=6.1.1.20; AltName: Full=Phenylalanyl-tRNA synthetase alpha subunit; Short=PheRS; chromosome CDS1137420 1020 + 0.396078
pnp polyribonucleotide nucleotidyltransferaseRecName: Full=Polyribonucleotide nucleotidyltransferase; EC=2.7.7.8; AltName: Full=Polynucleotide phosphorylase; Short=PNPase; chromosome CDS1147169 2085 - 0.404796
proS prolyl tRNA synthetaseRecName: Full=Proline--tRNA ligase; EC=6.1.1.15; AltName: Full=Prolyl-tRNA synthetase; Short=ProRS; chromosome CDS579979 1707 + 0.454013
pth peptidyl tRNA hydrolaseRecName: Full=Peptidyl-tRNA hydrolase; Short=PTH; EC=3.1.1.29; chromosome CDS1085837 543 + 0.418048
rbfA ribosome binding factor ARecName: Full=Ribosome-binding factor A; chromosome CDS362389 363 + 0.349862
rl1 L1 ribosomal proteinRecName: Full=50S ribosomal protein L1; chromosome CDS92135 699 + 0.386266
rl10 L10 ribosomal proteinRecName: Full=50S ribosomal protein L10; chromosome CDS92849 513 + 0.403509
rl11 L11 ribosomal proteinRecName: Full=50S ribosomal protein L11; chromosome CDS91683 426 + 0.382629
rl13 L13 ribosomal proteinRecName: Full=50S ribosomal protein L13; chromosome CDS282588 450 - 0.371111
rl14 L14 ribosomal proteinRecName: Full=50S ribosomal protein L14; chromosome CDS724417 369 - 0.368564
rl15 L15 ribosomal proteinRecName: Full=50S ribosomal protein L15; chromosome CDS721203 435 - 0.390805
rl16 L16 ribosomal proteinRecName: Full=50S ribosomal protein L16; chromosome CDS725282 417 - 0.414868
rl17 L17 ribosomal proteinRecName: Full=50S ribosomal protein L17; chromosome CDS717378 429 - 0.358974
rl18 L18 ribosomal proteinRecName: Full=50S ribosomal protein L18; chromosome CDS722145 372 - 0.36828
rl19 L19 ribosomal proteinRecName: Full=50S ribosomal protein L19; chromosome CDS149813 366 + 0.415301
rl2 L2 ribosomal proteinRecName: Full=50S ribosomal protein L2; chromosome CDS727040 855 - 0.422222
rl20 L20 ribosomal proteinRecName: Full=50S ribosomal protein L20; chromosome CDS1137040 366 + 0.418033
rl21 L21 ribosomal proteinRecName: Full=50S ribosomal protein L21; chromosome CDS630229 321 - 0.404984
rl22 L22 ribosomal proteinRecName: Full=50S ribosomal protein L22; chromosome CDS726414 336 - 0.416667
rl23 L23 ribosomal proteinRecName: Full=50S ribosomal protein L23; chromosome CDS727916 336 - 0.383929
rl24 L24 ribosomal proteinRecName: Full=50S ribosomal protein L24; chromosome CDS724068 336 - 0.395833
rl27 L27 ribosomal proteinRecName: Full=50S ribosomal protein L27; chromosome CDS629950 255 - 0.45098
rl28 L28 ribosomal proteinRecName: Full=50S ribosomal protein L28; chromosome CDS372567 270 + 0.37037
rl29 L29 ribosomal proteinRecName: Full=50S ribosomal protein L29; chromosome CDS725061 219 - 0.356164
rl3 L3 ribosomal proteinRecName: Full=50S ribosomal protein L3; chromosome CDS728975 678 - 0.408555
rl31 L31 ribosomal proteinRecName: Full=50S ribosomal protein L31 type B; chromosome CDS144478 330 + 0.351515
rl32 L32 ribosomal proteinRecName: Full=50S ribosomal protein L32; chromosome CDS1096467 183 + 0.409836
rl33 L33 ribosomal proteinRecName: Full=50S ribosomal protein L33; chromosome CDS285521 159 - 0.339623
rl34 L34 ribosomal proteinRecName: Full=50S ribosomal protein L34; chromosome CDS1068303 138 - 0.463768
rl35 L35 ribosomal proteinRecName: Full=50S ribosomal protein L35; chromosome CDS1136827 195 + 0.384615
rl36 L36 ribosomal proteinRecName: Full=50S ribosomal protein L36; chromosome CDS1068685 138 + 0.398551
rl4 L4 ribosomal proteinRecName: Full=50S ribosomal protein L4; chromosome CDS728268 675 - 0.368889
rl5 L5 ribosomal proteinRecName: Full=50S ribosomal protein L5; chromosome CDS723524 543 - 0.377532
rl6 L6 ribosomal proteinRecName: Full=50S ribosomal protein L6; chromosome CDS722527 552 - 0.396739
rl7 L7/L12 ribosomal proteinRecName: Full=50S ribosomal protein L7/L12; chromosome CDS93405 390 + 0.387179
rl9 L9 ribosomal proteinRecName: Full=50S ribosomal protein L9; chromosome CDS1087091 510 + 0.390196
rnpA ribonuclease P protein componentRecName: Full=Ribonuclease P protein component; Short=RNase P protein; Short=RNaseP protein; EC=3.1.26.5; AltName: Full=Protein C5; chromosome CDS1067872 420 - 0.442857
rrf ribosome releasing factorRecName: Full=Ribosome-recycling factor; Short=RRF; AltName: Full=Ribosome-releasing factor; chromosome CDS783503 543 + 0.388582
rs1 S1 ribosomal proteinRecName: Full=30S ribosomal protein S1; chromosome CDS356599 1743 + 0.369478
rs10 S10 ribosomal proteinRecName: Full=30S ribosomal protein S10; chromosome CDS632572 318 - 0.393082
rs11 S11 ribosomal proteinRecName: Full=30S ribosomal protein S11; chromosome CDS718958 402 - 0.415423
rs12 S12 ribosomal proteinRecName: Full=30S ribosomal protein S12; chromosome CDS635537 372 - 0.443548
rs13 S13 ribosomal proteinRecName: Full=30S ribosomal protein S13; chromosome CDS719381 369 - 0.373984
rs14 S14 ribosomal proteinRecName: Full=30S ribosomal protein S14; chromosome CDS1068845 306 + 0.395425
rs15 S15 ribosomal proteinRecName: Full=30S ribosomal protein S15; chromosome CDS1149294 270 - 0.359259
rs16 S16 ribosomal proteinRecName: Full=30S ribosomal protein S16; chromosome CDS148327 360 + 0.411111
rs17 S17 ribosomal proteinRecName: Full=30S ribosomal protein S17; chromosome CDS724808 261 - 0.371648
rs18 S18 ribosomal proteinRecName: Full=30S ribosomal protein S18; chromosome CDS1086827 249 + 0.361446
rs19 S19 ribosomal proteinRecName: Full=30S ribosomal protein S19; chromosome CDS726768 267 - 0.382022
rs2 S2 ribosomal proteinRecName: Full=30S ribosomal protein S2; chromosome CDS781090 834 + 0.381295
rs20 S20 ribosomal proteinRecName: Full=30S ribosomal protein S20; chromosome CDS850358 300 - 0.363333
rs21 S21 ribosomal proteinRecName: Full=30S ribosomal protein S21; chromosome CDS44382 177 + 0.40678
rs3 S3 ribosomal proteinRecName: Full=30S ribosomal protein S3; chromosome CDS725727 672 - 0.418155
rs4 S4 ribosomal proteinRecName: Full=30S ribosomal protein S4; chromosome CDS822419 630 - 0.404762
rs5 S5 ribosomal proteinRecName: Full=30S ribosomal protein S5; chromosome CDS721630 498 - 0.391566
rs6 S6 ribosomal proteinRecName: Full=30S ribosomal protein S6; chromosome CDS1086471 339 + 0.374631
rs7 S7 ribosomal proteinRecName: Full=30S ribosomal protein S7; chromosome CDS634989 501 - 0.41517
rs8 S8 ribosomal proteinRecName: Full=30S ribosomal protein S8; chromosome CDS723105 402 - 0.415423
rs9 S9 ribosomal proteinRecName: Full=30S ribosomal protein S9; chromosome CDS282170 405 - 0.37037
serS seryl tRNA synthetase-2RecName: Full=Serine--tRNA ligase; EC=6.1.1.11; AltName: Full=Seryl-tRNA synthetase; Short=SerRS; AltName: Full=Seryl-tRNA(Ser/Sec) synthetase; chromosome CDS986766 1284 - 0.423676
sfhB pseudouridine synthaseSubName: Full=Predicted Pseudouridine Synthase; SubName: Full=Pseudouridine synthase; SubName: Full=Ribosomal large subunit pseudouridine synthase A; SubName: Full=Ribosomal large subunit pseudouridine synthase D; chromosome CDS805237 978 + 0.41411
spoU_1 rRNA methylaseSubName: Full=SpoU rRNA methylase family protein; SubName: Full=rRNA Methylase; SubName: Full=rRNA methylase; SubName: Full=tRNA methylase; chromosome CDS611777 798 - 0.385965
spoU_2 rRNA methylaseRecName: Full=Putative tRNA (cytidine(34)-2-O)-methyltransferase; EC=2.1.1.207; AltName: Full=tRNA (cytidine/uridine-2-O-)-methyltransferase; chromosome CDS739178 471 - 0.401274
tgt queuine tRNA ribosyl transferaseRecName: Full=Queuine tRNA-ribosyltransferase; EC=2.4.2.29; AltName: Full=Guanine insertion enzyme; AltName: Full=tRNA-guanine transglycosylase; chromosome CDS258979 1119 + 0.442359
thrS threonyl tRNA synthetaseRecName: Full=Threonine--tRNA ligase; EC=6.1.1.3; AltName: Full=Threonyl-tRNA synthetase; Short=ThrRS; chromosome CDS911185 1908 - 0.42086
trmD tRNA (guanine N-1)-methyltransferaseRecName: Full=tRNA (guanine-N(1)-)-methyltransferase; EC=2.1.1.228; AltName: Full=M1G-methyltransferase; AltName: Full=tRNA [GM37] methyltransferase; chromosome CDS148700 1086 + 0.412523
trpS tryptophanyl tRNA synthetaseRecName: Full=Tryptophan--tRNA ligase; EC=6.1.1.2; AltName: Full=Tryptophanyl-tRNA synthetase; Short=TrpRS; chromosome CDS908027 1035 - 0.428986
truA pseudouridylate synthase IRecName: Full=tRNA pseudouridine synthase A; EC=5.4.99.12; AltName: Full=tRNA pseudouridine(38-40) synthase; AltName: Full=tRNA pseudouridylate synthase I; AltName: Full=tRNA-uridine isomerase I; chromosome CDS669314 804 + 0.441542
truB tRNA pseudouridine synthaseRecName: Full=tRNA pseudouridine synthase B; EC=5.4.99.25; AltName: Full=tRNA pseudouridine(55) synthase; Short=Psi55 synthase; AltName: Full=tRNA pseudouridylate synthase; AltName: Full=tRNA-uridine isomerase; chromosome CDS362797 708 + 0.411017
tsf elongation factor TSRecName: Full=Elongation factor Ts; Short=EF-Ts; chromosome CDS781923 849 + 0.399293
tufA elongation factor TuRecName: Full=Elongation factor Tu; Short=EF-Tu; chromosome CDS89444 1185 + 0.431224
tyrS tyrosyl tRNA synthetaseRecName: Full=Tyrosine--tRNA ligase; EC=6.1.1.1; AltName: Full=Tyrosyl-tRNA synthetase; Short=TyrRS; chromosome CDS405088 1269 - 0.415288
valS alyl tRNA synthetaseRecName: Full=Valine--tRNA ligase; EC=6.1.1.9; AltName: Full=Valyl-tRNA synthetase; Short=ValRS; chromosome CDS112823 2823 + 0.424725
ycbF PP-loop superfamily ATPaseRecName: Full=tRNA-specific 2-thiouridylase MnmA; EC=2.8.1.-; chromosome CDS484041 1086 - 0.436464
yceC pseudouridine synthetase familyRecName: Full=Pseudouridine synthase; EC=5.4.99.-; chromosome CDS448724 699 + 0.436338
ychF GTP binding proteinRecName: Full=Ribosome-binding ATPase YchF; chromosome CDS364386 1095 - 0.4
yfhC cytosine deaminaseRecName: Full=tRNA-specific adenosine deaminase; EC=3.5.4.33; chromosome CDS1149832 447 + 0.44519
ygcA rRNA methyltransferseRecName: Full=Uncharacterized RNA methyltransferase CPn_0885/CP_0981/CPj0885/CpB0914; EC=2.1.1.-; chromosome CDS1008751 1206 - 0.407131
yjbC pseudouridine synthaseSubName: Full=Pseudouridine synthase; SubName: Full=Putative pseudouridine synthase; SubName: Full=Ribosomal large subunit pseudouridine synthase B; chromosome CDS980991 708 + 0.426554
yohI oxidoreductaseRecName: Full=tRNA-dihydrouridine synthase; EC=1.-.-.-; chromosome CDS863480 1008 + 0.434524
yqeV hypothetical proteinRecName: Full=Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB; EC=2.-.-.-; AltName: Full=tRNA-t(6)A37 methylthiotransferase; chromosome CDS554160 1266 - 0.43049
yvyD conserved hypothetical proteinSubName: Full=Ribosomal protein S30AE; SubName: Full=Uncharacterized protein; chromosome CDS676762 687 + 0.43377
ywlC SuA5 superfamily-related proteinSubName: Full=SuA5 Superfamily-related Protein; SubName: Full=SuA5 superfamily-related protein; SubName: Full=Sua5/YciO/YrdC family protein; chromosome CDS302087 861 - 0.375145