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2024-05-04 04:54:05

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Synechococcus elongatus PCC 6301, PCC6301

Number of genes found: 150

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Synechococcus elongatus PCC 6301, PCC6301
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA syc0628_d similar to tRNA-(MS[2]IO[6]A)-hydroxylasechromosome CDS698416 612 + 0.565359
NA syc1676_d N2, N2-dimethylguanosine tRNAchromosome CDS1814915 1146 + 0.581152
NA syc0437_d ribosomal large subunit pseudouridine synthase Dchromosome CDS490419 942 + 0.595541
NA syc2230_c hypothetical proteinchromosome CDS2381854 609 - 0.591133
NA syc0524_d hypothetical proteinchromosome CDS582968 789 + 0.576679
NA syc0050_d hypothetical proteinchromosome CDS60926 765 + 0.542484
NA syc0238_d glucose inhibited division proteinchromosome CDS274817 1401 + 0.581727
NA syc2027_d hypothetical proteinchromosome CDS2173721 1032 + 0.565891
NA syc0059_d probable tRNA/rRNA methyltransferasechromosome CDS68200 804 + 0.598259
NA syc1973_d probable tRNA/rRNA methyltransferasechromosome CDS2115374 1560 + 0.607692
NA syc2220_d probable tRNA/rRNA methyltransferasechromosome CDS2370425 471 + 0.543524
NA syc0571_c hypothetical proteinchromosome CDS641045 393 - 0.597964
NA syc1731_c hypothetical proteinchromosome CDS1874222 1359 - 0.599706
NA syc2520_d hypothetical proteinchromosome CDS2690440 2208 + 0.440217
NA syc1272_c probable RNA methyltransferasechromosome CDS1384031 1368 - 0.576754
NA syc0476_c hypothetical proteinchromosome CDS535637 717 - 0.596932
NA syc1018_d hypothetical proteinchromosome CDS1130806 567 + 0.57672
NA syc1229_d nitrogen regulation protein NifR3 homologchromosome CDS1340260 1005 + 0.574129
NA syc0967_c probable GTP binding proteinchromosome CDS1083194 1092 - 0.561355
NA syc1022_c mannose-1-phosphate guanyltransferasechromosome CDS1133782 2514 - 0.57677
NA syc1899_c hypothetical proteinchromosome CDS2039099 1131 - 0.501326
NA syc1791_d hypothetical proteinchromosome CDS1936614 813 + 0.575646
NA syc1753_d hypothetical proteinchromosome CDS1898733 702 + 0.589744
NA syc0535_d probable ribosomal large subunit pseudouridine synthase Bchromosome CDS598105 732 + 0.581967
NA syc1383_d hypothetical proteinchromosome CDS1500889 486 + 0.555556
NA syc1697_d hypothetical proteinchromosome CDS1835632 387 + 0.583979
NA syc2499_d probable pseudouridine synthasechromosome CDS2661975 600 + 0.593333
NA syc2123_d mannose-1-phosphate guanyltransferasechromosome CDS2272711 1170 + 0.533333
NA syc1594_d hypothetical proteinchromosome CDS1724730 1290 + 0.579845
NA syc2335_c hypothetical proteinchromosome CDS2492115 192 - 0.588542
NA syc0397_d hypothetical proteinchromosome CDS439666 1845 + 0.592412
NA syc1194_c hemolysin-like proteinchromosome CDS1303902 819 - 0.594628
NA syc0213_d polypeptide deformylasechromosome CDS246161 579 + 0.55095
NA syc0351_d probable tRNA/rRNA methyltransferasechromosome CDS392726 777 + 0.607465
alaS syc0664_c alanyl-tRNA synthetasechromosome CDS740190 2679 - 0.5838
argS syc0034_c arginyl-tRNA-synthetasechromosome CDS41230 1755 - 0.565242
asnS syc0710_c asparaginyl-tRNA synthetasechromosome CDS795538 1389 - 0.550036
aspS syc0240_c aspartyl-tRNA synthetasechromosome CDS278367 1800 - 0.571667
cumB syc2238_c putative cytidine and deoxycytidylate deaminasechromosome CDS2391220 507 - 0.542406
cysS syc2426_d cysteinyl-tRNA synthetasechromosome CDS2583803 1437 + 0.574809
eIF2BA syc2104_d probable translation initiation factor eIF-2B alpha subunitchromosome CDS2253596 1047 + 0.56256
efp syc1545_d elongation factor Pchromosome CDS1671394 558 + 0.537634
fmt syc1982_d methionyl-tRNA formyltransferasechromosome CDS2125131 984 + 0.590447
fus syc2011_d elongation factor EF-Gchromosome CDS2153457 1989 + 0.58371
fus syc0655_d elongation factor EF-Gchromosome CDS727828 2085 + 0.543885
gatA syc1975_d glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS2117436 1440 + 0.5625
gatB syc1386_c glutamyl-tRNA(Gln) amidotransferase subunit Bchromosome CDS1502455 1485 - 0.567677
gatC syc1780_c glutamyl-tRNA(Gln) amidotransferase subunit Cchromosome CDS1926084 291 - 0.52921
gltX syc1712_c glutamyl-tRNA synthetasechromosome CDS1847894 1446 - 0.602351
gltX syc0620_d glutamyl-tRNA synthetasechromosome CDS692513 903 + 0.591362
glyQ syc1647_c glycyl-tRNA synthetase alpha chainchromosome CDS1780667 879 - 0.554039
glyS syc1479_d glycyl-tRNA synthetase beta chainchromosome CDS1602491 2187 + 0.584362
gshB syc1778_c glutathione synthetasechromosome CDS1924688 972 - 0.596708
hemG syc2231_c protoporphyrinogen IX oxidasechromosome CDS2382468 882 - 0.591837
hisS syc1835_d histidyl-tRNA synthetasechromosome CDS1984487 1308 + 0.600917
ileS syc1669_d isoleucyl-tRNA synthetasechromosome CDS1804660 2865 + 0.573822
infA syc1596_c translation initiation factor IF-1chromosome CDS1726613 213 - 0.525822
infB syc2075_d translation initiation factor IF-2chromosome CDS2227093 3093 + 0.597155
infC syc1438_d translation initiation factor IF-3chromosome CDS1555342 555 + 0.531532
ksgA syc1202_d dimethyladenosine transferasechromosome CDS1309629 840 + 0.584524
leuS syc2174_d leucyl-tRNA synthetasechromosome CDS2318844 2598 + 0.571978
lrtA syc1751_d light repressed protein A homologchromosome CDS1896829 624 + 0.488782
lysS syc1691_d lysyl-tRNA synthetasechromosome CDS1828657 1515 + 0.574257
map syc1660_d methionine aminopeptidasechromosome CDS1793217 726 + 0.563361
metS syc0408_c methionyl-tRNA synthetasechromosome CDS452279 1578 - 0.559569
miaA syc1616_d tRNA delta-2-isopentenylpyrophosphate transferasechromosome CDS1745900 921 + 0.546145
nbp1 syc0048_c nucleic acid binding proteinchromosome CDS59105 888 - 0.56982
pcnB syc0746_d polyA polymerasechromosome CDS833803 1095 + 0.611872
pheS syc2029_c phenylalanyl-tRNA synthetase alpha chainchromosome CDS2175227 846 - 0.576832
pnp syc1666_d polyribonucleotide nucleotidyltransferasechromosome CDS1799334 2151 + 0.582985
prfA syc1894_d peptide chain release factor RF-1chromosome CDS2032740 1107 + 0.539295
prfB syc1112_d peptide chain release factor RF-2chromosome CDS1222371 915 + 0.561749
prfC syc1738_c peptide chain release factor RF-3chromosome CDS1884518 1671 - 0.570916
prmA syc2485_c putative methyltransferase for ribosomal protein L11chromosome CDS2646404 900 - 0.584444
proS syc2136_c proline-tRNA ligasechromosome CDS2284895 1803 - 0.560732
psbW syc2411_c photosystem II reaction center 13 kDa proteinchromosome CDS2569460 339 - 0.542773
pth syc1286_c peptidyl-tRNA hydrolasechromosome CDS1395630 627 - 0.585327
queA syc1755_c S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS1900715 1080 - 0.584259
rbfA syc1158_d ribosome binding factor Achromosome CDS1272012 414 + 0.570048
rfbF syc1440_d glucose-1-phosphate cytidylyltransferasechromosome CDS1557641 774 + 0.439276
rimM syc1839_c 16S rRNA processing protein RimMchromosome CDS1988180 549 - 0.591985
rluA syc0182_d ribosomal large subunit pseudouridine synthase Dchromosome CDS204886 1632 + 0.581495
rnd syc0851_c probable ribonuclease Dchromosome CDS947469 636 - 0.558176
rne syc0662_c ribonuclease Echromosome CDS734604 2427 - 0.590853
rpl1 syc0892_d 50S ribosomal protein L1chromosome CDS995081 714 + 0.558824
rpl10 syc0893_d 50S ribosomal protein L10chromosome CDS996023 528 + 0.537879
rpl11 syc0891_d 50S ribosomal protein L11chromosome CDS994581 426 + 0.551643
rpl12 syc0894_d 50S ribosomal protein L12chromosome CDS996610 387 + 0.540052
rpl13 syc1891_d 50S ribosomal protein L13chromosome CDS2031512 456 + 0.546053
rpl14 syc1875_d 50S ribosomal protein L14chromosome CDS2022384 366 + 0.554645
rpl15 syc1882_d 50S ribosomal protein L15chromosome CDS2025623 444 + 0.578829
rpl16 syc1872_d 50S ribosomal protein L16chromosome CDS2021464 429 + 0.582751
rpl17 syc1889_d 50S ribosomal protein L17chromosome CDS2030259 351 + 0.566952
rpl18 syc1880_d 50S ribosomal protein L18chromosome CDS2024677 363 + 0.592287
rpl19 syc1569_c 50S ribosomal protein L19chromosome CDS1694020 477 - 0.559748
rpl2 syc1868_d 50S ribosomal protein L2chromosome CDS2019154 864 + 0.586806
rpl20 syc0275_d 50S ribosomal protein L20chromosome CDS319279 351 + 0.561254
rpl21 syc0331_c 50S ribosomal protein L21chromosome CDS378773 384 - 0.544271
rpl22 syc1870_d 50S ribosomal protein L22chromosome CDS2020343 354 + 0.581921
rpl23 syc1867_d 50S ribosomal protein L23chromosome CDS2018822 303 + 0.564356
rpl24 syc1876_d 50S ribosomal protein L24chromosome CDS2022749 342 + 0.532164
rpl27 syc0330_c 50S ribosomal protein L27chromosome CDS378472 267 - 0.561798
rpl28 syc1457_d 50S ribosomal protein L28chromosome CDS1579792 237 + 0.561181
rpl29 syc1873_d 50S ribosomal protein L29chromosome CDS2021895 195 + 0.533333
rpl3 syc1865_d 50S ribosomal protein L3chromosome CDS2017511 642 + 0.571651
rpl31 syc1893_d 50S ribosomal protein L31chromosome CDS2032405 234 + 0.547009
rpl33 syc0427_c 50S ribosomal protein L33chromosome CDS479809 195 - 0.548718
rpl34 syc0071_d 50S ribosomal protein L34chromosome CDS83635 138 + 0.652174
rpl35 syc0274_d 50S ribosomal protein L35chromosome CDS319034 201 + 0.557214
rpl36 syc1885_d 50S ribosomal protein L36chromosome CDS2028141 114 + 0.491228
rpl4 syc1866_d 50S ribosomal protein L4chromosome CDS2018197 633 + 0.57346
rpl5 syc1877_d 50S ribosomal protein L5chromosome CDS2023133 540 + 0.559259
rpl6 syc1879_d 50S ribosomal protein L6chromosome CDS2024138 540 + 0.568519
rpl9 syc1551_d 50S ribosomal protein L9chromosome CDS1678598 459 + 0.553377
rps1 syc0836_d 30S ribosomal protein S1chromosome CDS932814 924 + 0.551948
rps10 syc0657_d 30S ribosomal protein S10chromosome CDS731242 318 + 0.566038
rps11 syc1887_d 30S ribosomal protein S11chromosome CDS2028856 393 + 0.597964
rps12 syc0653_d 30S ribosomal protein S12chromosome CDS726741 375 + 0.568
rps13 syc1886_d 30S ribosomal protein S13chromosome CDS2028409 378 + 0.587302
rps14 syc1072_d 30S ribosomal protein S14chromosome CDS1184059 303 + 0.594059
rps15 syc1801_c 30S ribosomal protein S15chromosome CDS1947124 309 - 0.569579
rps16 syc2320_c 30S ribosomal protein S16chromosome CDS2478047 249 - 0.574297
rps17 syc1874_d 30S ribosomal protein S17chromosome CDS2022124 249 + 0.578313
rps18 syc0426_c 30S ribosomal protein S18chromosome CDS479538 216 - 0.541667
rps19 syc1869_d 30S ribosomal protein S19chromosome CDS2020049 276 + 0.547101
rps2 syc1580_c 30S ribosomal protein S2chromosome CDS1704648 756 - 0.575397
rps20 syc2505_d 30S ribosomal protein S20chromosome CDS2669711 297 + 0.569024
rps21 syc2318_c 30S ribosomal protein S21chromosome CDS2477493 174 - 0.545977
rps3 syc1871_d 30S ribosomal protein S3chromosome CDS2020721 735 + 0.565986
rps4 syc2473_d 30S ribosomal protein S4chromosome CDS2634211 609 + 0.582923
rps5 syc1881_d 30S ribosomal protein S5chromosome CDS2025043 543 + 0.572744
rps6 syc1485_d 30S ribosomal protein S6chromosome CDS1608919 324 + 0.558642
rps7 syc0654_d 30S ribosomal protein S7chromosome CDS727283 471 + 0.573248
rps8 syc1878_d 30S ribosomal protein S8chromosome CDS2023700 402 + 0.58209
rps9 syc1892_d 30S ribosomal protein S9chromosome CDS2031967 408 + 0.590686
rrf syc1013_c ribosome recycling factorchromosome CDS1126596 549 - 0.520947
serS syc1069_d seryl-tRNA synthetasechromosome CDS1180874 1332 + 0.58033
sui1 syc1949_d translation initiation factor SUI1chromosome CDS2090116 447 + 0.590604
sun syc0580_d sun proteinchromosome CDS649621 1218 + 0.595238
tgt syc1063_c tRNA-guanine transglycosylasechromosome CDS1175726 1221 - 0.577396
thrS syc1504_d threonyl-tRNA synthetasechromosome CDS1626658 1824 + 0.523575
trmD syc1863_c tRNA (guanine-N1)-methyltransferasechromosome CDS2015657 708 - 0.581921
trmU syc2494_d tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2656554 1074 + 0.577281
trpS syc0245_c tryptophanyl-tRNA synthetasechromosome CDS284724 1014 - 0.564103
truA syc1890_d tRNA pseudouridine synthasechromosome CDS2030612 885 + 0.577401
truB syc0328_c tRNA pseudouridine synthase Bchromosome CDS376996 885 - 0.589831
tsf syc1579_c elongation factor EF-Tschromosome CDS1703880 666 - 0.543544
tufA syc0656_d elongation factor EF-Tuchromosome CDS729939 1230 + 0.566667
tyrS syc1540_d tyrosyl tRNA synthetasechromosome CDS1666754 1209 + 0.53019
valS syc0936_c valyl-tRNA synthetasechromosome CDS1044296 2730 - 0.488645