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2024-05-20 01:20:58

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Bacteroides fragilis YCH46, YCH46

Number of genes found: 188

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bacteroides fragilis YCH46, YCH46
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BF4171 50S ribosomal protein L14chromosome CDS4770207 366 - 0.428962
NA BF4177 30S ribosomal protein S19chromosome CDS4772688 270 - 0.374074
NA BF2648 hypothetical proteinchromosome CDS3049717 240 + 0.3125
NA BF0298 ribosomal protein S20chromosome CDS331331 255 - 0.34902
NA BF4070 conserved hypothetical proteinchromosome CDS4649982 297 - 0.441077
NA BF3701 probable 16S rRNA processing proteinchromosome CDS4210808 543 - 0.458564
NA BF0412 glycyl-tRNA synthetasechromosome CDS483397 1542 + 0.448768
NA BF1689 50S ribosomal protein L35chromosome CDS1959193 198 + 0.363636
NA BF4195 50S ribosomal protein L1chromosome CDS4791755 699 - 0.400572
NA BF1010 50S ribosomal protein L21chromosome CDS1218053 318 - 0.408805
NA BF3385 conserved hypothetical proteinchromosome CDS3873976 369 - 0.444444
NA BF4017 ribosomal large subunit pseudouridine synthase Bchromosome CDS4585401 1401 - 0.477516
NA BF4158 30S ribosomal protein S13chromosome CDS4763490 381 - 0.396325
NA BF0689 ribosome recycling factorchromosome CDS814916 561 - 0.463458
NA BF4157 30S ribosomal protein S11chromosome CDS4763089 390 - 0.412821
NA BF1687 threonyl-tRNA synthetasechromosome CDS1956457 1941 + 0.439979
NA BF1021 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1227708 927 - 0.455232
NA BF0196 cysteinyl-tRNA synthetasechromosome CDS214455 1476 - 0.484417
NA BF0500 conserved hypothetical proteinchromosome CDS576639 237 - 0.447257
NA BF1688 translation initiation factor IF-3chromosome CDS1958516 612 + 0.398693
NA BF3861 30S ribosomal protein S18chromosome CDS4401911 273 - 0.399267
NA BF1624 ribosomal protein L11 methyltransferasechromosome CDS1893381 843 - 0.47331
NA BF4165 50S ribosomal protein L18chromosome CDS4767602 345 - 0.4
NA BF4175 30S ribosomal protein S3chromosome CDS4771502 735 - 0.409524
NA BF2379 aspartyl-tRNA synthetasechromosome CDS2752131 1758 + 0.458476
NA BF2624 alanyl-tRNA synthetasechromosome CDS3015619 693 + 0.393939
NA BF0215 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS236913 1095 + 0.425571
NA BF0708 putative cytosine/adenosine deaminasechromosome CDS832658 438 + 0.472603
NA BF1534 glucose-1-phosphate cytidylyltransferasechromosome CDS1783141 813 + 0.367774
NA BF4199 elongation factor Tuchromosome CDS4793864 1185 - 0.44135
NA BF3266 phenylalanyl-tRNA synthetase alpha chainchromosome CDS3715858 1020 + 0.502941
NA BF2303 tRNA-guanine transglycosylasechromosome CDS2677103 1131 - 0.450928
NA BF0694 hypothetical proteinchromosome CDS821687 849 - 0.381625
NA BF1635 cytidine/deoxycytidylate deaminasechromosome CDS1904135 468 - 0.474359
NA BF0068 tyrosyl-tRNA synthetasechromosome CDS69202 1293 + 0.437742
NA BF4164 30S ribosomal protein S5chromosome CDS4767078 519 - 0.404624
NA BF2429 50S ribosomal protein L28chromosome CDS2807286 261 - 0.386973
NA BF0486 elongation factor Pchromosome CDS564572 567 - 0.451499
NA BF1007 seryl-tRNA synthetasechromosome CDS1216330 1275 - 0.461961
NA BF4176 50S ribosomal protein L22chromosome CDS4772242 411 - 0.403893
NA BF2425 putative Fe-S oxidoreductasechromosome CDS2804489 1299 - 0.384142
NA BF1684 peptide deformylasechromosome CDS1952135 555 + 0.409009
NA BF0925 tRNA pseudouridine synthase Achromosome CDS1102522 759 + 0.44664
NA BF4183 elongation factor Gchromosome CDS4775764 2118 - 0.447592
NA BF0487 50S ribosomal protein L34chromosome CDS565332 162 + 0.438272
NA BF2100 hypothetical proteinchromosome CDS2449081 504 + 0.412698
NA BF4158.1 50S ribosomal protein L36chromosome CDS4763904 117 - 0.333333
NA BF4200 sigma-54 modulation proteinchromosome CDS4795614 300 - 0.356667
NA BF2280 putative tRNA/rRNA methyltransferasechromosome CDS2653148 762 - 0.393701
NA BF0830 conserved hypothetical proteinchromosome CDS979542 1548 + 0.412145
NA BF2758 glutaminyl-tRNA synthetasechromosome CDS3170068 1749 + 0.520297
NA BF4009 putative translation initiation factor SUI1chromosome CDS4579444 351 + 0.452991
NA BF4196 50S ribosomal protein L11chromosome CDS4792469 444 - 0.434685
NA BF0563 50S ribosomal protein L19chromosome CDS646767 354 - 0.420904
NA BF4154 50S ribosomal protein L17chromosome CDS4760871 486 - 0.415638
NA BF2710 putative peptide chain release factorchromosome CDS3111958 621 - 0.489533
NA BF4579 GTP-binding proteinchromosome CDS5262408 1104 + 0.459239
NA BF4011 30S ribosomal protein S2 (BS1)chromosome CDS4581100 837 - 0.42055
NA BF2903 hypothetical proteinchromosome CDS3315897 372 - 0.427419
NA BF1552 ribonuclease Gchromosome CDS1802727 1575 - 0.438095
NA BF0057 tRNA pseudouridine synthase Bchromosome CDS61547 702 + 0.470085
NA BF0803 putative transcriptional regulator UpxY homologchromosome CDS956096 537 + 0.43203
NA BF0058 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS62297 1059 + 0.433428
NA BF1395 conserved hypothetical proteinchromosome CDS1629044 2574 - 0.413364
NA BF4185 30S ribosomal protein S12chromosome CDS4778571 402 - 0.485075
NA BF1141 ribosomal large subunit pseudouridine synthase Achromosome CDS1368844 1620 - 0.454938
NA BF4566 putative TIM-barrel enzymechromosome CDS5249926 975 + 0.515897
NA BF3810 lysyl-tRNA synthetasechromosome CDS4344682 1728 + 0.458912
NA BF1050 valyl-tRNA synthetasechromosome CDS1260511 2631 + 0.473204
NA BF2017 ATP-independent RNA helicasechromosome CDS2367090 1320 + 0.500758
NA BF1203 conserved hypothetical proteinchromosome CDS1436306 417 + 0.369305
NA BF4013 50S ribosomal protein L13chromosome CDS4582450 462 - 0.404762
NA BF2310 hypothetical proteinchromosome CDS2683736 435 - 0.347126
NA BF0263 translation initiation factor IF-2chromosome CDS286898 3048 + 0.437008
NA BF4160 methionine aminopeptidasechromosome CDS4764251 798 - 0.422306
NA BF0643 clindamycin resistance transfer factor BtgBchromosome CDS761569 936 - 0.355769
NA BF0028 conserved hypothetical proteinchromosome CDS34759 1374 + 0.465793
NA BF3884 S-adenosylmethionine:tRNAribosyltransferase-isom erasechromosome CDS4422622 1221 + 0.465192
NA BF4313 acetyltransferasechromosome CDS4914704 555 + 0.345946
NA BF2977 tRNA/rRNA methyltransferasechromosome CDS3382144 741 - 0.452092
NA BF2551 putative methionine aminopeptidase Achromosome CDS2933678 855 + 0.450292
NA BF3673 conserved hypothetical proteinchromosome CDS4185512 309 - 0.368932
NA BF4172 30S ribosomal protein S17chromosome CDS4770575 270 - 0.37037
NA BF1196 peptidyl-tRNA hydrolasechromosome CDS1431385 564 - 0.409574
NA BF4162 50S ribosomal protein L15chromosome CDS4766414 447 - 0.380313
NA BF2718 conserved hypothetical proteinchromosome CDS3119636 1236 - 0.457929
NA BF1043 30S ribosomal protein S1chromosome CDS1254026 1794 + 0.431996
NA BF2658 L-asparaginase Ichromosome CDS3057707 1047 + 0.469914
NA BF3860 50S ribosomal protein L9chromosome CDS4401456 444 - 0.396396
NA BF0837 hypothetical proteinchromosome CDS991222 1551 + 0.412637
NA BF3416 histidyl-tRNA synthetasechromosome CDS3902912 1365 - 0.434432
NA BF0027 hypothetical proteinchromosome CDS34099 330 - 0.415152
NA BF3660 conserved hypothetical proteinchromosome CDS4175091 1203 - 0.309227
NA BF2434 prolyl-tRNA synthetasechromosome CDS2815133 1494 - 0.453815
NA BF0185 putative nifR3 family TIM-barrel enzymechromosome CDS197982 933 - 0.484459
NA BF2585 putative transcriptional regulatory protein UpxY homologchromosome CDS2969917 519 - 0.421965
NA BF1009 50S ribosomal protein L27chromosome CDS1217761 270 - 0.433333
NA BF0374 peptide chain release factor RF-2chromosome CDS432475 960 + 0.452083
NA BF4117 ribosomal large subunit pseudouridine synthase Dchromosome CDS4714998 666 - 0.429429
NA BF4326 polyribonucleotide nucleotidyltransferasechromosome CDS4923341 2127 + 0.446168
NA BF2998 conserved hypothetical proteinchromosome CDS3405717 1404 - 0.586182
NA BF0065 putative ribonuclease P protein componentchromosome CDS67951 324 + 0.416667
NA BF2929 conserved hypothetical proteinchromosome CDS3333315 1287 + 0.470862
NA BF4271 conserved hypothetical proteinchromosome CDS4871422 1500 - 0.422667
NA BF4173 50S ribosomal protein L29chromosome CDS4770841 198 - 0.348485
NA BF0903 tRNA delta(2)-isopentenylpyrophosphate transferasechromosome CDS1080062 906 - 0.437086
NA BF4010 elongation factor Tschromosome CDS4579984 993 - 0.434038
NA BF1197 putative 50S ribosomal protein L25chromosome CDS1432055 591 - 0.407783
NA BF1195 conserved hypothetical proteinchromosome CDS1430933 426 - 0.41784
NA BF1878 putative periplasmic proteinchromosome CDS2206887 1011 + 0.493571
NA BF4215 L-asparaginase II precursorchromosome CDS4815322 1059 + 0.481586
NA BF3905 putative translation factorchromosome CDS4453264 564 - 0.466312
NA BF2427.1 50S ribosomal protein L33chromosome CDS2807071 189 - 0.354497
NA BF3862 30S ribosomal protein S6chromosome CDS4402186 345 - 0.373913
NA BF2055 acetyltransferasechromosome CDS2407600 537 + 0.396648
NA BF4090 50S ribosomal protein L32 (Ribosomal protein I)chromosome CDS4671736 186 - 0.419355
NA BF2275 isoleucyl-tRNA synthetasechromosome CDS2647209 3426 + 0.411851
NA BF4178 50S ribosomal protein L2chromosome CDS4772978 825 - 0.450909
NA BF4586 leucyl-tRNA synthetasechromosome CDS5270961 2832 + 0.445975
NA BF1261 conserved hypothetical proteinchromosome CDS1498898 468 + 0.480769
NA BF2810 hypothetical proteinchromosome CDS3220621 606 + 0.39769
NA BF4170 50S ribosomal protein L24chromosome CDS4769866 321 - 0.373832
NA BF2539 RNA methyltransferasechromosome CDS2920839 1419 + 0.472868
NA BF4036 tryptophanyl-tRNA synthetasechromosome CDS4612547 1092 + 0.479853
NA BF4202 30S ribosomal protein S21chromosome CDS4796883 192 - 0.34375
NA BF2402 tRNA (Guanine-N(1)-)-methyltransferasechromosome CDS2773903 678 - 0.432153
NA BF1311 peptide chain release factor 3chromosome CDS1550913 1575 + 0.468571
NA BF3856 putative Fe-S oxidoreductasechromosome CDS4397333 1320 - 0.489394
NA BF0986 conserved hypothetical proteinchromosome CDS1189854 615 - 0.484553
NA BF3171 conserved hypothetical proteinchromosome CDS3593014 2094 + 0.425979
NA BF4167 30S ribosomal protein S8chromosome CDS4768553 396 - 0.340909
NA BF4163 50S ribosomal protein L30chromosome CDS4766891 177 - 0.38983
NA BF4206 glutamyl-tRNA synthetasechromosome CDS4801041 1518 - 0.460474
NA BF0761 alanyl-tRNA synthetasechromosome CDS906778 2619 - 0.474609
NA BF3271 conserved hypothetical proteinchromosome CDS3721255 1038 + 0.481696
NA BF4016 asparaginyl-tRNA synthetasechromosome CDS4583891 1404 - 0.445869
NA BF0508 putative protoporphyrinogen oxidasechromosome CDS584994 837 + 0.452808
NA BF4352 uridine kinasechromosome CDS4954353 1674 + 0.4319
NA BF0001 tRNA/rRNA methyltransferasechromosome CDS67 528 + 0.410985
NA BF2955 conserved hypothetical proteinchromosome CDS3356507 615 - 0.439024
NA BF4159 translation initiation factor IF-1chromosome CDS4764029 219 - 0.347032
NA BF3500 putative acetyltransferasechromosome CDS4001229 543 + 0.425414
NA BF1149 hypothetical proteinchromosome CDS1383532 603 + 0.384743
NA BF0097 putative D-tyrosyl-tRNA deacylasechromosome CDS107237 453 - 0.408389
NA BF0489 ribosomal large subunit pseudouridine synthase Dchromosome CDS566376 1074 + 0.477654
NA BF4182 30S ribosomal protein S10chromosome CDS4775377 306 - 0.405229
NA BF4174 50S ribosomal protein L16chromosome CDS4771044 435 - 0.425287
NA BF1291 putative rRNA methylasechromosome CDS1527510 813 + 0.472325
NA BF4166 50S ribosomal protein L6chromosome CDS4767968 570 - 0.382456
NA BF2708 conserved hypothetical proteinchromosome CDS3110110 1113 - 0.471698
NA BF3867 elongation factor Gchromosome CDS4406185 2157 - 0.481224
NA BF4415 conserved hypothetical proteinchromosome CDS5044721 1659 - 0.425558
NA BF1690 50S ribosomal protein L20chromosome CDS1959491 351 + 0.418803
NA BF4193 50S ribosomal protein L7/L12chromosome CDS4790804 375 - 0.418667
NA BF4168 chloroplast 30S ribosomal protein S14chromosome CDS4769003 300 - 0.44
NA BF0778 dimethyladenosine transferasechromosome CDS927751 819 - 0.426129
NA BF4179 50S ribosomal protein L23chromosome CDS4773808 291 - 0.350515
NA BF3301 50S ribosomal protein L31 type Bchromosome CDS3753562 252 + 0.388889
NA BF4012 30S ribosomal protein S9chromosome CDS4582057 387 - 0.439276
NA BF1857 conserved hypothetical proteinchromosome CDS2184668 315 + 0.374603
NA BF3640 tRNA nucleotidyltransferasechromosome CDS4153981 1446 - 0.470954
NA BF4181 50S ribosomal protein L3chromosome CDS4774741 618 - 0.435275
NA BF4464 30S ribosomal protein S15chromosome CDS5121409 270 + 0.407407
NA BF1031 conserved hypothetical proteinchromosome CDS1238668 651 - 0.431644
NA BF2975 putative translation initiation inhibitorchromosome CDS3379745 375 - 0.482667
NA BF4479 ribosome-binding factor Achromosome CDS5141247 333 - 0.381381
NA BF2716 30S ribosomal protein S16chromosome CDS3118581 546 + 0.452381
NA BF4156 30S ribosomal protein S4chromosome CDS4762364 606 - 0.405941
NA BF0607 L-asparaginase Ichromosome CDS715039 1050 - 0.493333
NA BF0141 tetracycline resistant protein TetQchromosome CDS147508 1974 - 0.396657
NA BF0910 peptide chain release factor 1chromosome CDS1087153 1113 - 0.4708
NA BF2822 putative partitioning proteinchromosome CDS3229600 1746 - 0.455326
NA BF4169 50S ribosomal protein L5chromosome CDS4769309 558 - 0.390681
NA BF4194 50S ribosomal protein L10chromosome CDS4791227 513 - 0.401559
NA BF0852 putative translation initiation inhibitorchromosome CDS1013087 1131 + 0.503979
NA BF2540 RNA pseudouridylate synthasechromosome CDS2922262 924 + 0.491342
NA BF1407 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferasechromosome CDS1643190 1062 + 0.467985
NA BF4001 putative tRNA (5-methylaminomethyl-2-thiouridylate) methyltransferasechromosome CDS4572703 1089 - 0.528926
NA BF4421 arginyl-tRNA synthetasechromosome CDS5055823 1794 - 0.473802
NA BF3667 putative transcriptional regulator UpxY homologchromosome CDS4180220 627 - 0.516746
NA BF3903 methionyl-tRNA formyltransferasechromosome CDS4450405 975 - 0.454359
NA BF4184 30S ribosomal protein S7chromosome CDS4777935 477 - 0.406709
NA BF0673 conserved hypothetical proteinchromosome CDS793852 1992 + 0.480924
NA BF2299 ATP-dependent RNA helicasechromosome CDS2672495 1257 - 0.416866
NA BF0660 conserved hypothetical proteinchromosome CDS772274 729 + 0.452675
NA BF1660 ATP-dependent RNA helicase DeaDchromosome CDS1923815 1284 - 0.450935
NA BF4180 50S ribosomal protein L4chromosome CDS4774115 627 - 0.403509
NA BF0169 ATP-dependent RNA helicasechromosome CDS181580 1911 - 0.495029