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2024-05-07 07:26:03

Gene list

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COG category: Translation, ribosomal structure and biogenesis
Organism: Symbiobacterium thermophilum, IAM14863

Number of genes found: 162

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Symbiobacterium thermophilum, IAM14863
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA STH3317 50S ribosomal protein L9chromosome CDS3546526 441 - 0.687075
NA STH1785 conserved hypothetical proteinchromosome CDS1928959 462 - 0.681818
NA STH1531 polynucleotide phosphorylasechromosome CDS1668196 2289 + 0.68152
NA STH3158 putative transcriptional regulatorchromosome CDS3354961 1038 - 0.697495
NA STH2294 50S ribosomal protein L25chromosome CDS2474945 585 - 0.683761
NA STH1165 S-adenosylmethionine:tRNA-ribosyltransferase-iso merasechromosome CDS1296531 1026 + 0.693957
NA STH3040 30S ribosomal protein S9chromosome CDS3255478 387 - 0.671835
NA STH1999 putative acetyltransferasechromosome CDS2137820 576 - 0.697917
NA STH433 conserved hypothetical proteinchromosome CDS468015 297 + 0.707071
NA STH816 translation initiation factor eIF-2B alpha subunitchromosome CDS915862 1050 - 0.719048
NA STH1471 50S ribosomal protein L19chromosome CDS1610250 366 + 0.699454
NA STH1670 30S ribosomal protein S1chromosome CDS1811067 1326 + 0.667421
NA STH3229 conserved hypothetical proteinchromosome CDS3442711 294 - 0.676871
NA STH1633 2-methylthioadenine synthetasechromosome CDS1776419 1458 + 0.699588
NA STH1359 50S ribosomal protein L28chromosome CDS1505243 192 - 0.65625
NA STH123 30S ribosomal protein S30AE familychromosome CDS141972 537 + 0.62756
NA STH3341 50S ribosomal protein L34chromosome CDS3565557 144 - 0.666667
NA STH1470 tRNA methyltransferasechromosome CDS1609386 744 + 0.72043
NA STH2818 RNA methyltransferasechromosome CDS3031893 1380 - 0.721014
NA STH3249 dimethyladenosine transferasechromosome CDS3462470 858 - 0.684149
NA STH1523 ribosome-binding factor Achromosome CDS1662469 378 + 0.656085
NA STH1664 conserved hypothetical proteinchromosome CDS1806638 582 + 0.773196
NA STH2820 glutamyl-tRNA(Gln) amidotransferase subunit Bchromosome CDS3034451 1473 - 0.661236
NA STH1763 conserved hypothetical proteinchromosome CDS1909379 540 - 0.655556
NA STH2281 50S ribosomal protein L25chromosome CDS2453484 618 - 0.669903
NA STH1521 L7AE family 50S ribosomal proteinchromosome CDS1658923 312 + 0.746795
NA STH11 putative Cu-binding proteinchromosome CDS13929 459 + 0.705882
NA STH2023 peptide-chain-release factor 3chromosome CDS2165477 1656 + 0.680556
NA STH365 putative acetyltransferasechromosome CDS406290 537 + 0.711359
NA STH318 hypothetical proteinchromosome CDS356642 657 - 0.668189
NA STH278 conserved hypothetical proteinchromosome CDS315658 957 + 0.482759
NA STH1166 queuine tRNA-ribosyltransferasechromosome CDS1297624 1203 + 0.699086
NA STH1344 10-Formyltetrahydrofolate:L-methionyl-tRNAN-form yltransferasechromosome CDS1489848 981 + 0.723751
NA STH3321 30S ribosomal protein S6chromosome CDS3548810 288 - 0.628472
NA STH3053 Ribosomal protein L14Echromosome CDS3263563 258 - 0.635659
NA STH430 conserved hypothetical proteinchromosome CDS465953 330 + 0.678788
NA STH1005 translation initiation factor IF-1chromosome CDS1123678 228 + 0.675439
NA STH2080 conserved domain proteinchromosome CDS2214521 363 - 0.710744
NA STH1747 tRNA isopentenylpyrophosphate transferasechromosome CDS1892459 960 - 0.69375
NA STH3340 ribonuclease P protein componentchromosome CDS3565116 348 - 0.658046
NA STH1891 23S rRNA pseudouridine synthasechromosome CDS2034951 984 - 0.745935
NA STH1243 23S rRNA pseudouridine synthasechromosome CDS1381109 915 + 0.700546
NA STH1343 polypeptide deformylasechromosome CDS1489192 654 + 0.686544
NA STH1841 putative rRNA methylasechromosome CDS1985782 774 - 0.723514
NA STH1460 conserved hypothetical proteinchromosome CDS1602906 546 - 0.716117
NA STH1092 50S ribosomal protein L35chromosome CDS1211641 195 + 0.579487
NA STH1783 ribosomal large subunit pseudouridine synthase Bchromosome CDS1927371 765 - 0.708497
NA STH1469 16S rRNA processing proteinchromosome CDS1608857 525 + 0.691429
NA STH1093 50S ribosomal subunit protein L20chromosome CDS1211899 354 + 0.655367
NA STH1864 translation elongation factor Pchromosome CDS2003833 558 - 0.623656
NA STH73 peptide chain release factor 1chromosome CDS95974 1071 + 0.674136
NA STH1466 30S ribosomal protein S16chromosome CDS1607907 267 + 0.632959
NA STH1527 ribosomal small subunit pseudouridine synthase Achromosome CDS1665729 756 + 0.738095
NA STH1349 conserved hypothetical proteinchromosome CDS1495139 1380 + 0.713768
NA STH3115 rRNA methyltransferasechromosome CDS3315558 741 - 0.721997
NA STH507 ribosomal protein L11 methyltransferasechromosome CDS548835 915 + 0.718033
NA STH1491 30S ribosomal protein S2chromosome CDS1628532 795 + 0.630189
NA STH2617 aminoglycoside 6'-N-acetyltransferasechromosome CDS2813261 579 - 0.682211
NA STH3319 30S ribosomal protein S18chromosome CDS3548116 195 - 0.635897
NA STH2068 translation initiation factor eIF-2B alpha subunitchromosome CDS2205746 1080 - 0.680556
NA STH1091 translation initiation factor IF-3chromosome CDS1211025 600 + 0.631667
NA STH1097 rRNA methyltransferasechromosome CDS1215041 822 + 0.770073
NA STH2380 hypothetical proteinchromosome CDS2567388 456 + 0.594298
NA STH1607 tRNA/rRNA methyltransferasechromosome CDS1747852 774 - 0.737726
NA STH136 peptide chain release factor 2chromosome CDS158684 927 + 0.676375
NA STH1522 putative translational initiation factorchromosome CDS1659239 3135 + 0.709729
NA STH1528 30S ribosomal protein S15chromosome CDS1666586 279 + 0.602151
NA STH2560 putative acetyltransferasechromosome CDS2748385 567 + 0.749559
NA STH3049 Ribosomal protein S11chromosome CDS3262015 390 - 0.679487
NA STH1120 putative mannose-1-phosphate guanyltransferasechromosome CDS1247181 1032 - 0.687016
NA STH1494 ribosome recycling factorchromosome CDS1631294 558 + 0.629032
NA STH2430 putative D-tyrosyl-tRNA(Tyr) deacylasechromosome CDS2613360 456 - 0.70614
NA STH555 putative amidasechromosome CDS596691 1050 - 0.749524
NA STH2822 glutamyl-tRNA(Gln) amidotransferase subunit Cchromosome CDS3037414 291 - 0.66323
NA STH2948 highly conserved GTP-binding proteinchromosome CDS3171965 1104 + 0.680254
NA STH343 ribonuclease PH (tRNA nucleotidyltransferase)chromosome CDS381131 822 + 0.70073
NA STH2114 conserved domain proteinchromosome CDS2256420 594 - 0.718855
NA STH3078 protein translation elongation factor Gchromosome CDS3277035 2085 - 0.653717
NA STH3077 translation elongation factor Tuchromosome CDS3275808 1188 - 0.659091
NA STH3140 protein translation elongation factor Gchromosome CDS3340397 2088 - 0.668582
NA STH1759 2-methylthioadenine synthetasechromosome CDS1905007 1413 - 0.675159
NA STH1443 50S ribosomal protein L32chromosome CDS1586935 195 + 0.671795
NA STH3081 ribosomal protein L7AE familychromosome CDS3280179 252 - 0.642857
NA STH1647 ATP-dependent RNA helicasechromosome CDS1792701 1581 + 0.675522
NA STH1525 tRNA pseudouridine 55 synthasechromosome CDS1663816 900 + 0.725556
NA STH3082 conserved hypothetical proteinchromosome CDS3280547 621 - 0.677939
NA STH2821 glutamyl-tRNA(Gln) amidotransferase subunit Achromosome CDS3035926 1467 - 0.70075
NA STH74 putative protoporphyrinogen oxidasechromosome CDS97051 918 + 0.766885
NA STH2389 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferasechromosome CDS2572863 1173 - 0.681159
NA STH1945 hypothetical protein, glycine-richchromosome CDS2086532 444 - 0.777027
NA STH2575 peptidasechromosome CDS2759434 747 + 0.676037
NA STH3041 50S ribosomal protein L13chromosome CDS3255896 432 - 0.601852
NA STH1054 putative RNA nucleotidyltransferasechromosome CDS1169497 1374 + 0.754731
NA STH75 putative translation factorchromosome CDS98145 1050 + 0.724762
NA STH1371 mannose-1-phosphate guanyltransferasechromosome CDS1519305 693 + 0.730159
NA STH1492 translation elongation factor Tschromosome CDS1629493 915 + 0.68306
alaS1 STH2000 alanyl-tRNA synthetasechromosome CDS2138429 2619 - 0.699885
alaS2 STH2766 alanyl-tRNA synthetase, truncatedchromosome CDS2984707 1203 + 0.709892
argS STH19 arginyl-tRNA synthetasechromosome CDS29238 1677 + 0.686345
asnS STH1582 asparaginyl-tRNA synthetasechromosome CDS1721242 1314 + 0.656012
aspS STH2421 aspartyl-tRNA synthetasechromosome CDS2604464 1782 - 0.686869
cysS STH3119 cysteinyl-tRNA synthetasechromosome CDS3318178 1416 - 0.666667
gidA2 STH1482 glucose-inhibited division proteinchromosome CDS1620780 1344 + 0.703869
gltX STH16 glutamyl-tRNA synthetasechromosome CDS19233 1449 + 0.665977
gluS STH2668 glutamyl-tRNA synthetasechromosome CDS2858651 972 + 0.75823
glySA STH574 glycyl-tRNA synthetase alpha chainchromosome CDS617070 969 + 0.658411
glySB STH575 glycyl-tRNA synthetase beta chainchromosome CDS618041 2103 + 0.702806
hisS1 STH2422 histidyl-tRNA synthetasechromosome CDS2606263 1299 - 0.69669
hisS2 STH2839 histidyl-tRNA synthetasechromosome CDS3059322 1200 - 0.735833
ileS STH1231 isoleucyl-tRNA synthetasechromosome CDS1366220 2817 + 0.669152
infA STH3052 translation initiation factor IF-1chromosome CDS3263335 219 - 0.579909
leuS STH444 leucyl-tRNA synthetasechromosome CDS480794 2586 + 0.668987
lysS1 STH525 lysyl-tRNA synthetasechromosome CDS565729 1488 + 0.721102
lysS2 STH208 lysyl-tRNA synthetasechromosome CDS232701 1530 + 0.643791
metS2 STH2813 methionyl-tRNA synthetasechromosome CDS3026961 462 - 0.729437
pheSA STH1105 phenylalanyl-tRNA synthetase alpha subunitchromosome CDS1223521 1032 + 0.678295
proS STH1502 prolyl-tRNA synthetasechromosome CDS1638896 1467 + 0.665303
rplA STH3089 50S ribosomal protein L1chromosome CDS3290874 708 - 0.675141
rplB STH3072 50S ribosomal protein L2chromosome CDS3272785 834 - 0.67506
rplC STH3075 50S ribosomal protein L3chromosome CDS3274562 651 - 0.658986
rplD STH3074 50S ribosomal protein L4chromosome CDS3273915 624 - 0.653846
rplE STH3063 50S ribosomal protein L5chromosome CDS3269041 543 - 0.624309
rplF STH3060 50S ribosomal protein L6chromosome CDS3267728 537 - 0.651769
rplJ STH3087 50S ribosomal protein L10chromosome CDS3289765 540 - 0.688889
rplK STH3090 50S ribosomal protein L11chromosome CDS3291659 423 - 0.650118
rplL STH3086 50S ribosomal protein L7/L12chromosome CDS3289327 384 - 0.669271
rplN STH3065 50S ribosomal protein L14chromosome CDS3269906 369 - 0.642276
rplO STH3056 50S ribosomal protein L15chromosome CDS3266115 468 - 0.685897
rplP STH3068 50S ribosomal protein L16chromosome CDS3270825 468 - 0.662393
rplQ STH3046 50S ribosomal protein L17chromosome CDS3259921 342 - 0.654971
rplR STH3059 50S ribosomal protein L18chromosome CDS3267342 372 - 0.666667
rplU STH429 50S ribosomal protein L21chromosome CDS465634 315 + 0.650794
rplV STH3070 50S ribosomal protein L22chromosome CDS3272102 342 - 0.625731
rplW STH3073 50S ribosomal protein L23chromosome CDS3273631 285 - 0.617544
rplX STH3064 50S ribosomal protein L24chromosome CDS3269619 252 - 0.59127
rpmA STH431 50S ribosomal protein L27chromosome CDS466287 288 + 0.631944
rpmC STH3067 50S ribosomal protein L29chromosome CDS3270623 213 - 0.586854
rpmD STH3057 50S ribosomal protein L30chromosome CDS3266622 183 - 0.655738
rpmE STH71 ribosomal protein L31chromosome CDS94714 210 + 0.633333
rpmG STH3093 50S ribosomal protein L33chromosome CDS3293319 165 - 0.563636
rpmJ STH3051 ribosomal protein L36chromosome CDS3263110 114 - 0.552632
rpsC STH3069 30S ribosomal protein S3chromosome CDS3271296 804 - 0.697761
rpsD STH3048 30S ribosomal protein S4chromosome CDS3261368 624 - 0.671474
rpsD STH113 30S ribosomal protein S4chromosome CDS132640 606 + 0.691419
rpsE STH3058 30S ribosomal protein S5chromosome CDS3266819 501 - 0.696607
rpsG STH3079 30S ribosomal protein S7chromosome CDS3279159 471 - 0.653928
rpsH STH3061 30S ribosomal protein S8chromosome CDS3268281 399 - 0.611529
rpsJ STH3076 30S ribosomal protein S10chromosome CDS3275389 309 - 0.624595
rpsL STH3080 30S ribosomal protein S12chromosome CDS3279745 384 - 0.651042
rpsM STH3050 30S ribosomal protein S13chromosome CDS3262421 375 - 0.650667
rpsN STH3062 30S ribosomal protein S14chromosome CDS3268843 186 - 0.629032
rpsQ STH3066 30S ribosomal protein S17chromosome CDS3270342 285 - 0.617544
rpsS STH3071 30S ribosomal protein S19chromosome CDS3272485 282 - 0.595745
rpsT STH476 30S ribosomal protein S20chromosome CDS515688 285 - 0.666667
rpsU STH514 30S ribosomal protein S21chromosome CDS554208 177 + 0.615819
selB STH1073 selenocysteine-specific elongation factorchromosome CDS1186127 1890 + 0.72381
serS STH10 seryl-tRNA synthetasechromosome CDS12383 1266 + 0.657188
spoVC STH3238 Stage V sporulation protein C, peptidyl-tRNA hydrolasechromosome CDS3453613 570 - 0.7
thrS STH2558 threonyl-tRNA synthetasechromosome CDS2744090 1956 - 0.67229
trpS STH1411 tryptophanyl-tRNA synthetasechromosome CDS1557234 1011 + 0.667656
tyrS STH1122 tyrosyl-tRNA synthetasechromosome CDS1253196 1227 + 0.669927
valS STH366 valyl-tRNA synthetasechromosome CDS407146 2736 + 0.676901